mRNA_Ecto-sp13_S_contig1382.2990.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Match: D7G466_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G466_ECTSI) HSP 1 Score: 509 bits (1311), Expect = 2.960e-178 Identity = 260/329 (79.03%), Postives = 264/329 (80.24%), Query Frame = 1
Query: 1 VFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLGIVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAKISPNSMGQYPVIVTSSCFFFSGRPHNSIPQVYVGNLSWECQWQDLKDHMRAAGNVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEVRPGAGDLSCVCRPHFCANLRMIPMPLFMCPRQGPTGSKRMGQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVREDNRPF 987
VFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLG VEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAK+ YVGNLSWECQWQDLKDHMRAAG+VKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREE GP GSKR+GQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVREDNRP+
Sbjct: 172 VFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLGTVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAKV------------------------------YVGNLSWECQWQDLKDHMRAAGSVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREE---------------------------------GPIGSKRIGQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVREDNRPY 437
BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Match: A0A7S2KX18_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KX18_9STRA) HSP 1 Score: 248 bits (633), Expect = 5.920e-75 Identity = 143/332 (43.07%), Postives = 186/332 (56.02%), Query Frame = 1
Query: 1 VFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLGIVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAKISPNSMGQYPVIVTSSCFFFSGRPHNSIPQV--YVGNLSWECQWQDLKDHMRAAGNVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEVRPGAGDLSCVCRPHFCANLRMIPMPLFMCPRQGPTGSKRMGQLHEGA---EGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVREDNR 981
V+V NLAY+V WQDLKDHM++AG V A+V + DGRSKG GIVEF+ A+NAI L++TEL GR I VRE+R + G G G V GR +N + V YVGNL++E WQ+LKDHMR GN+ D+ Q GRSKGC +V Y++P+EA AIR+L ++EL GR IFVREDRE S+ G L GA +G Q++V N+SW TGW+ LKDHF QCG V E+ E GR KG+ +RF + DAA+AI +L+G + GR++ VR DN+
Sbjct: 179 VYVGNLAYEVAWQDLKDHMRDAGEVQFAEVMMMNDGRSKGCGIVEFADEEGAQNAIDTLNDTELCGRQIFVREDREQKVSGG----GHHGQHXXXXXXXXXLNRVGXGAXXXXGRYNNQLGNVNVYVGNLAYETTWQELKDHMRRVGNIDKADILQGNDGRSKGCGIVIYQSPKEAQRAIRELQNSELNGRPIFVREDRESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SRTSGNLMPGAPSEQGCQLYVGNLSWGTGWRDLKDHFGQCGGVDRAEVAEGPDGRKKGFGVIRFHTAGDAAEAIERLNGGEFMGRKLEVRLDNK 504
BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Match: A0A7S1DBL6_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DBL6_CYCTE) HSP 1 Score: 240 bits (613), Expect = 1.110e-73 Identity = 135/327 (41.28%), Postives = 181/327 (55.35%), Query Frame = 1
Query: 1 VFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLGIVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAKISPNSMGQYPVIVTSSCFFFSGRPHNSIPQVYVGNLSWECQWQDLKDHMRAAGNVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEVRPGAGDLSCVCRPHFCANLRMIPMPLFMCPRQGPTGSKRMGQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVREDNR 981
V+V NL++DV WQDLKDHM++AG V+ A+V +GRSKG GIVE++ P EA+ AI L++TEL GR + VRE+R N G G GA G VYV NL+++ WQDLKDH RAAGNV + P GRS GC VV Y+ P+EA AIR+L +++L GR +++R+DR V+PG G G Q+ V N+S++T WQ LKDHF+QCG V+ VE+ E +GR KG+ TVRFGS +A AI+QL+G +L GR + VR D++
Sbjct: 63 VYVGNLSWDVAWQDLKDHMRDAGEVVHAEVITEANGRSKGCGIVEYATPAEAQEAIKTLNDTELKGRMVFVREDRET--NSGTYHGAPGGAXXXXXXXXXXXXXXXXXXXXXXGT------SVYVWNLAYDTSWQDLKDHCRAAGNVDQATILTNPEGRSLGCGVVVYQNPKEASRAIRELQNSDLNGRPMYLRKDR--VQPGGGRXXXXXXXXXXXXXXXXXXXXX--------------------SGCQLFVGNLSFDTSWQDLKDHFRQCGEVEHVEVMETPEGRKKGFGTVRFGSAAEAEAAISQLNGVELQGRTLEVRLDHK 359
BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Match: A0A7S4IUY5_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IUY5_9STRA) HSP 1 Score: 243 bits (621), Expect = 4.730e-73 Identity = 139/328 (42.38%), Postives = 181/328 (55.18%), Query Frame = 1
Query: 1 VFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLGIVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAKISPNSMGQYPVIVTSSCFF-FSGRPHNSIPQVYVGNLSWECQWQDLKDHMRAAGNVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEVRPGAGDLSCVCRPHFCANLRMIPMPLFMCPRQGPTGSKRMGQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVREDNR 981
V+V NL++DV QDLKDHM+NAG V+ A+V DGRSKG GIVEF+ EA AIS L++TEL GR I VRE+R + + F F GR VYVGNL++E WQDLKDHMR AGNV ++ Q GRSKGC +V Y+ PQEA AIR+L +T L GR IFVREDRE+ + R+ A G Q+ V N+SW+T W+ LKDHF+QCG V+ E+ E G+S+G+ TVRF ++DAA+AI +L+G +L GR + V+ D +
Sbjct: 232 VYVGNLSWDVALQDLKDHMRNAGEVVFAEVMKEHDGRSKGCGIVEFATAAEAEEAISTLTDTELKGRMIFVREDR-------------------ETTXXXXXXXXXXAVFGGFQGRXXXXXTSVYVGNLAYETSWQDLKDHMRKAGNVDQANILQGEDGRSKGCGIVRYQRPQEASRAIRELQNTMLTGRPIFVREDREQGSHHXXXXXXXXXXXXXXHSRV-------------------------AAGCQLWVGNLSWDTSWRELKDHFRQCGDVERAEVMEGPDGQSRGFGTVRFYRQRDAANAIQRLNGVELQGRVLEVKIDGK 515
BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Match: A0A7S4IV24_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IV24_9STRA) HSP 1 Score: 246 bits (627), Expect = 1.430e-71 Identity = 139/328 (42.38%), Postives = 181/328 (55.18%), Query Frame = 1
Query: 1 VFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLGIVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAKISPNSMGQYPVIVTSSCFF-FSGRPHNSIPQVYVGNLSWECQWQDLKDHMRAAGNVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEVRPGAGDLSCVCRPHFCANLRMIPMPLFMCPRQGPTGSKRMGQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVREDNR 981
V+V NL++DV WQ LKDHM+NAG V+ A+V DGRSKG GIVEF+ EA AIS L++TEL GR I VRE+R + + F F GR VYVGNL++E WQDLKDHMR AGNV ++ Q GRSKGC +V Y+ PQEA AIR+L +T L GR IFVREDRE+ + R+ A G Q+ V N+SW+T W+ LKDHF+QCG V+ E+ E G+S+G+ TVRF ++DAA+AI +L+G +L GR + V+ D +
Sbjct: 504 VYVGNLSWDVAWQGLKDHMRNAGEVVFAEVMKEHDGRSKGCGIVEFATAAEAEEAISTLTDTELKGRMIFVREDR-------------------ETTXXXXXXXXXXAVFGGFQGRXXXXXTSVYVGNLAYETSWQDLKDHMRKAGNVDQANILQGEDGRSKGCGIVRYQRPQEASRAIRELQNTMLTGRPIFVREDREQGSHHXXXXXXXXXXXXXXHSRV-------------------------AAGCQLWVGNLSWDTSWRELKDHFRQCGDVERAEVMEGPDGQSRGFGTVRFYRQRDAANAIQRLNGVELQGRVLEVKIDGK 787
BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Match: A0A7S1BM28_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BM28_9STRA) HSP 1 Score: 233 bits (593), Expect = 3.950e-70 Identity = 138/325 (42.46%), Postives = 179/325 (55.08%), Query Frame = 1
Query: 1 VFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLGIVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAKISPNSMGQYPVIVTSSCFFFSGRPHNSIPQVYVGNLSWECQWQDLKDHMRAAGNVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEVRPGAGDLSCVCRPHFCANLRMIPMPLFMCPRQGPTGSKRMGQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVRED 975
V+V NL+++V WQDLKDHM+ AG V A+V G DGRSKG GIVE++ +A+ AIS L++T+L GR I VRE+R VGG ++ VYVGNL++E WQDLKDHMRAAGNV D+ GRSKGCA+V Y+ PQEA AIR+L ++ L GR IFVREDRE+ G G G G + +G Q+ V N+S++T W+ LKDHFKQCG V VE+ E GR KGY TV F +DA+ AI +++G +L GR + V+ D
Sbjct: 108 VYVGNLSWEVVWQDLKDHMRQAGDVQFAEVMTGGDGRSKGCGIVEYATAEQAQEAISTLNDTDLNGRMIFVREDRE--------VGGXXXXXXXXXXX-------XXXXXXXXXXXXSNACSVYVGNLAFETPWQDLKDHMRAAGNVDKADILTGEDGRSKGCAIVIYQKPQEAARAIRELQNSVLQGRPIFVREDREQ---GGGRXXXXXXXXXXXR------------SAGYDGDYDRMPVDDGTA-TQLFVGNLSYDTTWEELKDHFKQCGEVDRVEVMEGPDGRKKGYGTVSFFKAKDASSAIRRMNGVELAGRPLEVKVD 401
BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Match: A0A6H5J8N0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8N0_9PHAE) HSP 1 Score: 230 bits (586), Expect = 5.770e-69 Identity = 141/368 (38.32%), Postives = 191/368 (51.90%), Query Frame = 1
Query: 1 VFVSNLAYDVQWQDLKDHMKN-AGSVIRADVFVGPDGRSKGLGIVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRG------------------VG-------GAAGAK--------ISPNSMG-------QYPVIVTSSCFFFSGRPHNSIPQVYVGNLSWECQWQDLKDHMRAAGNVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEVRPGAGDLSCVCRPHFCANLRMIPMPLFMCPRQGPTGSKRMGQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVREDNR 981
V+V NLA+DV WQDLKDHM+ G VIRADV GRS+G GIVE+++P +A AI QL+ +EL R I VRE+R ++G G G VG GA G + + SMG + P + ++YVGNL+W +WQ+LKDHMR G V D+ Q+ GRSKGC +VEYE + A+ AIR+L++T L GR IFVREDRE+ P E GRQ++V N+S+ET W LKDHF+ G V+ ++ D RSKG+ TVRF ++++A AI +L+GT+L R+I VRED++
Sbjct: 15 VYVGNLAWDVAWQDLKDHMRGLGGEVIRADVMTDQGGRSRGCGIVEYAEPEQATQAIEQLNNSELKNRMIFVREDR-ESGTPGSGHXXXXXXXXXXXXXXXXMVGQMQMGPMGAFGGQPFAAGPGALMGQSMGGHMQQMQMHQXXXXXXXXXXXAMPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVLHADVLQDGDGRSKGCGIVEYEDIRGANRAIRELNNTALGGRPIFVREDREQQNPRQXXXXXXXXXXXXXXXXXXXXXX----------------XXENLAGRQLYVGNLSFETTWADLKDHFRTAGEVERADVMMDGSRRSKGWGTVRFRTQEEAQSAIQELNGTELGSRQIEVREDSK 365
BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Match: A0A7S0DYZ3_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0DYZ3_9CRYP) HSP 1 Score: 227 bits (579), Expect = 8.800e-69 Identity = 135/347 (38.90%), Postives = 181/347 (52.16%), Query Frame = 1
Query: 1 VFVSNLAYDVQWQDLKDHMKNAGS---VIRADVFVGPDGRSKGLGIVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAKISPNSMGQYPVIVTSSCFFFSGRPHNSIPQVYVGNLSWECQWQDLKDHMRAAG---NVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREE-------------VRPGAGDLSCVCRPHFCA---NLRMIPMPLFMCPRQGPTGSKRMGQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVRED 975
V+V NL+++ WQDLKDHM+ G V+ ++V GRSKG +VE+S P A AI +L +T++ GR I VRE+R D+ +VYVGNLSW+ WQD+KDHMR +VK VD+ +P GRSKGCA+VEY +P EA AI +L+ T+LLGR IFVREDRE G + V R F N+R PMP + + G + L +GR+V+V N+SWE WQ LKDH + G V++ +I GRSKG A V + + ++A AI +L +DL GR I VRED
Sbjct: 37 VYVGNLSWECSWQDLKDHMRGPGGDLDVVYSEVMYDGGGRSKGCALVEYSSPQFATRAIEELHDTDIRGRKIFVREDREDS-------------------------------------------RVYVGNLSWDAAWQDVKDHMRGPNQDMDVKHVDVLLDPVGRSKGCAIVEYSSPAEAQRAIDELNHTDLLGRNIFVREDRENGISSNSNNGVAQVTFNGVNNNPAVIRGPFTVMRGNMRATPMPARVQMPRVTRGPQIRPPLRRPGQGRRVYVGNLSWECQWQDLKDHMRAAGEVRYADIMYGPDGRSKGCALVEYNTVEEAQKAIAELHDSDLMGRLIFVRED 340
BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Match: D8LGN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGN3_ECTSI) HSP 1 Score: 231 bits (588), Expect = 9.010e-68 Identity = 138/368 (37.50%), Postives = 186/368 (50.54%), Query Frame = 1
Query: 1 VFVSNLAYDVQWQDLKDHMKN-AGSVIRADVFVGPDGRSKGLGIVEFSKPYEARNAISQLSETELMGRPIQVREERGD---------------------------------------AGNHGRGVGGAAGAKISPNSMGQYPVIVTSSCFFFSGR-PHNSIPQVYVGNLSWECQWQDLKDHMRAAGNVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEVRPGAGDLSCVCRPHFCANLRMIPMPLFMCPRQGPTGSKRMGQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVREDNR 981
V+V NLA+DV WQDLKDHM+ G VIRADV GRS+G GIVE+++P +A AI QL+ +EL R I VRE+R A G +G + G + M Q G P + ++YVGNL+W +WQ+LKDHMR G V D+ Q+ GRSKGC +VEYE + A+ AIR+L++T L GR IFVREDRE+ P R E GRQ++V N+S+ET W LKDHF+ G V+ ++ D RSKG+ TVRF ++++A AI +L+GT+L R+I VRED++
Sbjct: 153 VYVGNLAWDVAWQDLKDHMRGLGGEVIRADVMTDQGGRSRGCGIVEYAEPEQATQAIEQLNNSELKNRMIFVREDRESGTPGXXXXXXXXXXXXXXXXXMVGQMQMGPMGAFGGQPFAAGPGALMGQSMGGHMQQMQMHQXXXXXXXXXXXXXGAMPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDIRGANRAIRELNNTALGGRPIFVREDREQQNP-----------------RQXXXXXXXXXXXXXXXXXXXXXXXENLAGRQLYVGNLSFETTWADLKDHFRTAGEVERADVMMDGSRRSKGWGTVRFRTQEEAQSAIQELNGTELGSRQIEVREDSK 503
BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Match: A0A2D4CCJ1_PYTIN (RNA binding protein putative (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CCJ1_PYTIN) HSP 1 Score: 225 bits (573), Expect = 1.010e-67 Identity = 137/346 (39.60%), Postives = 188/346 (54.34%), Query Frame = 1
Query: 1 VFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLGIVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAKISPNSMGQYPVIVTSSCFFFSGRPHNSIPQ-VYVGNLSWECQWQDLKDHMRAAGNVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEVRPGAGDLSCVCRPHFCANLRMIPMPLFMCPRQGPTG---------------SKRMGQLHEGA-----EGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVRED 975
V+V NLA+ VQWQDLKD+M++AG V R + GRSKG +V F +A+ AI L++TE GR + VRE+R G G ++P ++ +G P ++ + V+VGNLSW +WQDLKD+ + AG V D+ +E GGRS+G +VE+ T +EA AI LHD+EL GR IFVREDRE +G +S + A IP PL P G G S++M A EG + V N+ + WQ LKDHF++ G V+ VEIP+ + G+S+GY VRF DA AI++ +GT+L GR I VR D
Sbjct: 25 VYVGNLAWAVQWQDLKDYMRSAGEVERVVLMEDHAGRSKGCAVVTFVTEADAQRAIHTLNDTEFHGRXLFVREDRDPQSGSNTGAWNPPGPPLAP-------LLPPPHSVQDAGPPAPTLGRRVFVGNLSWNIKWQDLKDYFKKAGRVLHADVMEEAGGRSRGFGLVEFSTAEEAQQAIAMLHDSELDGRRIFVREDRENE---SGSISSI------AKRGNIPPPLAPIPIPGSNGAPGMLPXXXXXXXXYSQQMPPSSSYAPAANNEGTTLFVGNLPYGVNWQELKDHFREAGDVEHVEIPQLSDGKSRGYGIVRFVHPDDAMHAIDRFNGTELKGRTIIVRHD 354 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1382.2990.1 >prot_Ecto-sp13_S_contig1382.2990.1 ID=prot_Ecto-sp13_S_contig1382.2990.1|Name=mRNA_Ecto-sp13_S_contig1382.2990.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=330bp VFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLGIVEFSKPYback to top mRNA from alignment at Ecto-sp13_S_contig1382:448..1896+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1382.2990.1 ID=mRNA_Ecto-sp13_S_contig1382.2990.1|Name=mRNA_Ecto-sp13_S_contig1382.2990.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1449bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1382:448..1896+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1382:448..1896+ >mRNA_Ecto-sp13_S_contig1382.2990.1 ID=mRNA_Ecto-sp13_S_contig1382.2990.1|Name=mRNA_Ecto-sp13_S_contig1382.2990.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=990bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1382:448..1896+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |