prot_Ecto-sp13_S_contig13816.2987.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13816.2987.1
Unique Nameprot_Ecto-sp13_S_contig13816.2987.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length99
Homology
BLAST of mRNA_Ecto-sp13_S_contig13816.2987.1 vs. uniprot
Match: D8LN84_ECTSI (Ribosomal protein rpl30 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LN84_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 6.210e-63
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0
Query:    1 MNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYFAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDAGDSDILRQGAEA 98
            MNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYFAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDAGDSDILRQGAEA
Sbjct:   14 MNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYFAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDAGDSDILRQGAEA 111          
BLAST of mRNA_Ecto-sp13_S_contig13816.2987.1 vs. uniprot
Match: A0A835YXX2_9STRA (Ribosomal protein rpl30 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXX2_9STRA)

HSP 1 Score: 165 bits (417), Expect = 4.890e-51
Identity = 77/93 (82.80%), Postives = 89/93 (95.70%), Query Frame = 0
Query:    1 MNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYFAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDAGDSDILR 93
            +N RLQLVM+SGKASLGYK T+K MR+++AKM++ISNNCPPLRKSEIEY+A+LAKC VHHY+GSNTDLGTACGKYFRVSVL+ITDAGDSDILR
Sbjct:   14 INTRLQLVMRSGKASLGYKQTLKCMRTSKAKMIIISNNCPPLRKSEIEYYALLAKCNVHHYSGSNTDLGTACGKYFRVSVLAITDAGDSDILR 106          
BLAST of mRNA_Ecto-sp13_S_contig13816.2987.1 vs. uniprot
Match: A0A812PA55_SYMMI (RPL30 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812PA55_SYMMI)

HSP 1 Score: 159 bits (402), Expect = 9.760e-49
Identity = 72/93 (77.42%), Postives = 90/93 (96.77%), Query Frame = 0
Query:    1 MNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYFAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDAGDSDILR 93
            +N+RLQLVM+SGKASLGYK+TIK++R+T+AK+V+IS+NCPPLRKSEIEY+AMLAKC VHHY G+N+DLGTACGK++RVS+LS+TD GDSDILR
Sbjct:   16 INSRLQLVMRSGKASLGYKTTIKTLRNTKAKLVIISSNCPPLRKSEIEYYAMLAKCTVHHYAGTNSDLGTACGKFYRVSMLSVTDGGDSDILR 108          
BLAST of mRNA_Ecto-sp13_S_contig13816.2987.1 vs. uniprot
Match: L8GX53_ACACA (60S ribosomal protein, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GX53_ACACA)

HSP 1 Score: 152 bits (384), Expect = 5.410e-46
Identity = 72/94 (76.60%), Postives = 84/94 (89.36%), Query Frame = 0
Query:    1 MNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYFAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDAGDSDILRQ 94
            +N+RL LVMKSGK +LGYKST+KS+R  +AK+++IS NCPPLRKSEIEY+AMLAK  VHHYTG+N DLGTACGKYFRVS LSITD GDSDI+RQ
Sbjct:   14 INSRLALVMKSGKYTLGYKSTLKSLRQGKAKLIIISTNCPPLRKSEIEYYAMLAKTGVHHYTGNNIDLGTACGKYFRVSSLSITDPGDSDIIRQ 107          
BLAST of mRNA_Ecto-sp13_S_contig13816.2987.1 vs. uniprot
Match: A0A7S2USR9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USR9_9STRA)

HSP 1 Score: 153 bits (387), Expect = 6.140e-46
Identity = 72/98 (73.47%), Postives = 88/98 (89.80%), Query Frame = 0
Query:    1 MNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYFAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDAGDSDILRQGAEA 98
            MN++LQLVMKSGKASLGYKS+IK++R+ +AK+VL+S NCPPLR+SEIEY+AMLAK  VHHY G+NTDLGTACGKYFRV VL +T+AGDS+ILR   E+
Sbjct:   53 MNSQLQLVMKSGKASLGYKSSIKALRNNKAKLVLVSKNCPPLRRSEIEYYAMLAKVGVHHYAGNNTDLGTACGKYFRVGVLCVTNAGDSEILRSIPES 150          
BLAST of mRNA_Ecto-sp13_S_contig13816.2987.1 vs. uniprot
Match: A0A7S1BKT7_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BKT7_9STRA)

HSP 1 Score: 152 bits (383), Expect = 7.220e-46
Identity = 69/97 (71.13%), Postives = 90/97 (92.78%), Query Frame = 0
Query:    1 MNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYFAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDAGDSDILRQGAE 97
            MN+RL+LVMKSGKA+LGYK+TI+S+RS++AK++L+++NCPPLRKSE+EY+AMLAK  VHHY+G+NT+LGTACGK+F  SVL++ DAGDSDIL  GAE
Sbjct:   13 MNSRLKLVMKSGKATLGYKATIRSLRSSKAKLILVASNCPPLRKSELEYYAMLAKTHVHHYSGNNTELGTACGKFFNCSVLTVLDAGDSDILTVGAE 109          
BLAST of mRNA_Ecto-sp13_S_contig13816.2987.1 vs. uniprot
Match: A0A7S3HF33_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HF33_9STRA)

HSP 1 Score: 151 bits (381), Expect = 1.650e-45
Identity = 68/94 (72.34%), Postives = 89/94 (94.68%), Query Frame = 0
Query:    1 MNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYFAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDAGDSDILRQ 94
            +N+++QLVMKSGK +LGYK+TIK++R+ +AKMVLI++N PPLRKSE+EY+AMLAKC VHHY G+N++LGTACGK++RVS++SITDAGDSDILRQ
Sbjct:   19 INSKVQLVMKSGKTALGYKTTIKALRANKAKMVLIASNTPPLRKSEVEYYAMLAKCVVHHYAGNNSELGTACGKFYRVSMVSITDAGDSDILRQ 112          
BLAST of mRNA_Ecto-sp13_S_contig13816.2987.1 vs. uniprot
Match: A0A482SS92_9ARCH (50S ribosomal protein L30e n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SS92_9ARCH)

HSP 1 Score: 150 bits (378), Expect = 5.340e-45
Identity = 67/93 (72.04%), Postives = 87/93 (93.55%), Query Frame = 0
Query:    1 MNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYFAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDAGDSDILR 93
            +N ++QLVMKSGK +LGYK+T+K++RS +AKMV+ISNN P LRKSE+EY+AMLAKC++HHY+G+N+DLGTACGK+FRVS++SITD GDSDILR
Sbjct:   23 INGKIQLVMKSGKTALGYKTTLKALRSNKAKMVVISNNTPTLRKSEVEYYAMLAKCSIHHYSGNNSDLGTACGKFFRVSMMSITDPGDSDILR 115          
BLAST of mRNA_Ecto-sp13_S_contig13816.2987.1 vs. uniprot
Match: A0A7R9Y9P0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9P0_9STRA)

HSP 1 Score: 148 bits (373), Expect = 2.490e-44
Identity = 71/100 (71.00%), Postives = 85/100 (85.00%), Query Frame = 0
Query:    1 MNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYFAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDAGDSDILRQ--GAEA 98
            MN ++QLVM+SGKA LGYK +IKS+RS   K+V+IS NCPPLRKSEIEY+AMLAKC VHHYTG+ TDLGTACGKYF VS +++TD GDSDI+ +  GAEA
Sbjct:   12 MNTKIQLVMRSGKALLGYKQSIKSLRSQSGKLVVISANCPPLRKSEIEYYAMLAKCGVHHYTGNGTDLGTACGKYFNVSCMTVTDPGDSDIVSREGGAEA 111          
BLAST of mRNA_Ecto-sp13_S_contig13816.2987.1 vs. uniprot
Match: A0A7S1GEK3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GEK3_9STRA)

HSP 1 Score: 148 bits (373), Expect = 2.490e-44
Identity = 70/93 (75.27%), Postives = 83/93 (89.25%), Query Frame = 0
Query:    1 MNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYFAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDAGDSDILR 93
            +NARLQLVMKSGK +LGYK  IK++R+ +AK V+IS+NCPPLRKSEIEY+AMLAK  VHHYTG+N+DLGTACGK+FR S LSI DAGDSDI+R
Sbjct:   14 INARLQLVMKSGKVALGYKQVIKTLRNGKAKYVIISSNCPPLRKSEIEYYAMLAKTNVHHYTGTNSDLGTACGKFFRASTLSILDAGDSDIIR 106          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13816.2987.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN84_ECTSI6.210e-63100.00Ribosomal protein rpl30 n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YXX2_9STRA4.890e-5182.80Ribosomal protein rpl30 n=1 Tax=Tribonema minus Ta... [more]
A0A812PA55_SYMMI9.760e-4977.42RPL30 protein n=1 Tax=Symbiodinium microadriaticum... [more]
L8GX53_ACACA5.410e-4676.6060S ribosomal protein, putative n=1 Tax=Acanthamoe... [more]
A0A7S2USR9_9STRA6.140e-4673.47Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1BKT7_9STRA7.220e-4671.13Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S3HF33_9STRA1.650e-4572.34Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A482SS92_9ARCH5.340e-4572.0450S ribosomal protein L30e n=1 Tax=archaeon TaxID=... [more]
A0A7R9Y9P0_9STRA2.490e-4471.00Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1GEK3_9STRA2.490e-4475.27Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 1..94
e-value: 8.8E-47
score: 158.9
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 2..93
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 2..92
e-value: 3.4E-22
score: 78.0
IPR039109Ribosomal protein L30/YlxQPANTHERPTHR11449RIBOSOMAL PROTEIN L30coord: 1..93
NoneNo IPR availablePANTHERPTHR11449:SF16coord: 1..93
IPR022991Ribosomal protein L30e, conserved sitePROSITEPS00993RIBOSOMAL_L30E_2coord: 67..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13816contigEcto-sp13_S_contig13816:2612..2908 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13816.2987.1mRNA_Ecto-sp13_S_contig13816.2987.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13816 271..3844 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13816.2987.1 ID=prot_Ecto-sp13_S_contig13816.2987.1|Name=mRNA_Ecto-sp13_S_contig13816.2987.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=99bp
MNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYF
AMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDAGDSDILRQGAEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029064L30e-like
IPR004038Ribosomal_L7Ae/L30e/S12e/Gad45
IPR039109L30/L30e/YlxQ
IPR022991Ribosomal_L30e_CS