prot_Ecto-sp13_S_contig13811.2984.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13811.2984.1
Unique Nameprot_Ecto-sp13_S_contig13811.2984.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length210
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13811.2984.1 vs. uniprot
Match: A0A6H5JE26_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE26_9PHAE)

HSP 1 Score: 231 bits (589), Expect = 3.990e-67
Identity = 141/209 (67.46%), Postives = 146/209 (69.86%), Query Frame = 0 
Query:    1 MHLPSPSQGAPVSDGSGDASGVHGLYSTPRHRVAAQASGXXXXXXXXVGLHGYPQQAPMTXXXXXXXXXRQRGAPPARRGGHDGFYMLPRQPGAAPEGTHRIGGGEFYVRHQQHGATQEGVHGGVYIXXXXXXXXXXXXXXGGRRAGGVCISPEREGRASXXXXXXXXXXXXGDGAGAGVGGVRDDYVMVSPDRPPPVPQPHYGPYSSR 209
            MHLPSP QGAP          V GLYSTPRH VAA ASG        VGLH Y QQAPMT         +QRGAPPARRGGHD FYMLP+QPGAAP+GTHRIGGGE Y R     ATQEGV+GGVYI               GRRAGGVCISPE EG+A XXXXXXXXXXXX    GAGVGGVRDDYVMVSPDRPPPVPQP YGPYSSR
Sbjct:  756 MHLPSPLQGAPARXXXXXXXXVDGLYSTPRHHVAALASGGGG-----VGLHAYTQQAPMTGGSGFGFPMQQRGAPPARRGGHDSFYMLPQQPGAAPKGTHRIGGGELYFRXXXXXATQEGVYGGVYIPRQPQGAAPEGVRGSGRRAGGVCISPELEGQAXXXXXXXXXXXXXX--VGAGVGGVRDDYVMVSPDRPPPVPQPDYGPYSSR 957
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BLAST of mRNA_Ecto-sp13_S_contig13811.2984.1 vs. uniprot
Match: D8LBM4_ECTSI (TPR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBM4_ECTSI)

HSP 1 Score: 228 bits (582), Expect = 5.210e-66
Identity = 132/210 (62.86%), Postives = 136/210 (64.76%), Query Frame = 0 
Query:    1 MHLPSPSQGAPVSDGSGDASGVHGLYSTPRHRVAAQASGXXXXXXXXVGLHGYPQQAPMTXXXXXXXXXRQRGAPPARRGGHDGFYMLPRQPGAAPEGTHRIGGGEFYVRHQQHGATQEGVHGGVYIXXXXXXXXXXXXXXGGRRAGGVCISPEREGRASXXXXXXXXXXXXGDG-AGAGVGGVRDDYVMVSPDRPPPVPQPHYGPYSSR 209
            MHLPSP QGAP     GDASGV GLYSTPRH VAA            VGLH Y QQAPMT         +Q GAPPARRGGHDGFYMLP+QPGAAPEGTHRIGG + YVR +QHGAT     GGV I               G RA GVCISPEREGRAS              G AGAGVG VRDDYVMVSPDRPPPVPQPHYGPYSSR
Sbjct:  794 MHLPSPLQGAPAXXXXGDASGVDGLYSTPRHDVAALGRSPGGV----VGLHAYTQQAPMTGSGVGFPG-QQWGAPPARRGGHDGFYMLPQQPGAAPEGTHRIGGEKLYVRPRQHGATXXXXXGGVSISRQPQGVAPEGVRGVGSRARGVCISPEREGRASPVGRRGDGHRGSDGGVAGAGVGRVRDDYVMVSPDRPPPVPQPHYGPYSSR 998
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13811.2984.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JE26_9PHAE3.990e-6767.46SH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LBM4_ECTSI5.210e-6662.86TPR domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13811contigEcto-sp13_S_contig13811:1179..1823 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13811.2984.1mRNA_Ecto-sp13_S_contig13811.2984.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13811 983..2885 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13811.2984.1 ID=prot_Ecto-sp13_S_contig13811.2984.1|Name=mRNA_Ecto-sp13_S_contig13811.2984.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=210bp
MHLPSPSQGAPVSDGSGDASGVHGLYSTPRHRVAAQASGGGGGGGGGVGL
HGYPQQAPMTGGSGFGFPGRQRGAPPARRGGHDGFYMLPRQPGAAPEGTH
RIGGGEFYVRHQQHGATQEGVHGGVYIPRQPQGATPEGVRGGGRRAGGVC
ISPEREGRASPVGRRGDGHRGGGDGAGAGVGGVRDDYVMVSPDRPPPVPQ
PHYGPYSSR*
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