prot_Ecto-sp13_S_contig13807.2983.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13807.2983.1
Unique Nameprot_Ecto-sp13_S_contig13807.2983.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length122
Homology
BLAST of mRNA_Ecto-sp13_S_contig13807.2983.1 vs. uniprot
Match: D8LB78_ECTSI (Centrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB78_ECTSI)

HSP 1 Score: 224 bits (571), Expect = 1.060e-73
Identity = 113/122 (92.62%), Postives = 117/122 (95.90%), Query Frame = 0
Query:    1 MQPRSARTYVRVGNLQCAARRPCANFVPRRVLFLIEIEWSLVDPVGSISLGNLKKVANEFGHTISDAELMEMISTANYVEGLADEDEQLSNEVTFPDFYNLMTKGRSAASTAEASPKTPGGG 122
            MQPR ART+VRVGNLQC ARRPCANFVPRRVL LIEIEWSL+DPVGSISLGNLKKVANEFGHTISDAELMEMISTANYVEGLAD DEQLSNEV+FPDFYNLMTKGRS+AS AEASPKTPGGG
Sbjct:    1 MQPRPARTHVRVGNLQCVARRPCANFVPRRVLSLIEIEWSLLDPVGSISLGNLKKVANEFGHTISDAELMEMISTANYVEGLADADEQLSNEVSFPDFYNLMTKGRSSASAAEASPKTPGGG 122          
BLAST of mRNA_Ecto-sp13_S_contig13807.2983.1 vs. uniprot
Match: A0A023B8U4_GRENI (Centrin, caltractin n=2 Tax=Gregarina niphandrodes TaxID=110365 RepID=A0A023B8U4_GRENI)

HSP 1 Score: 51.2 bits (121), Expect = 1.840e-5
Identity = 29/62 (46.77%), Postives = 35/62 (56.45%), Query Frame = 0
Query:   43 DPVGSISLGNLKKVANEFGHTISDAELMEMISTANYVEGLADEDEQLSNEVTFPDFYNLMTK 104
            D  GSIS  NLK+VA E G T++D EL EMI  A         D     E++F DFY +MTK
Sbjct:  104 DRTGSISFKNLKRVAQELGETMTDEELKEMIERA---------DSNGDGEISFEDFYAIMTK 156          
BLAST of mRNA_Ecto-sp13_S_contig13807.2983.1 vs. uniprot
Match: A0A4D9DEJ2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DEJ2_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 4.820e-5
Identity = 30/59 (50.85%), Postives = 38/59 (64.41%), Query Frame = 0
Query:   46 GSISLGNLKKVANEFGHTISDAELMEMISTANYVEGLADEDEQLSNEVTFPDFYNLMTK 104
            GSIS  +LK+VA E G  +SDAEL EMI  A+     AD+D     EV+F DFY +MT+
Sbjct:  166 GSISFKDLKRVAKELGENMSDAELKEMIQRAD-----ADQD----GEVSFEDFYTIMTR 215          
BLAST of mRNA_Ecto-sp13_S_contig13807.2983.1 vs. uniprot
Match: A0A086PT87_TOXGO (Putative centrin n=1 Tax=Toxoplasma gondii MAS TaxID=943118 RepID=A0A086PT87_TOXGO)

HSP 1 Score: 48.9 bits (115), Expect = 5.730e-5
Identity = 27/62 (43.55%), Postives = 36/62 (58.06%), Query Frame = 0
Query:   43 DPVGSISLGNLKKVANEFGHTISDAELMEMISTANYVEGLADEDEQLSNEVTFPDFYNLMTK 104
            D  G+I+L NLK+VA E G T+S+ EL EM+  A         D     E++F DFY +MTK
Sbjct:   53 DRTGTITLKNLKRVAKELGETMSEDELREMLERA---------DSNGDGEISFEDFYAIMTK 105          
BLAST of mRNA_Ecto-sp13_S_contig13807.2983.1 vs. uniprot
Match: A0A086M5N1_TOXGO (EF hand protein (Fragment) n=3 Tax=Toxoplasma gondii TaxID=5811 RepID=A0A086M5N1_TOXGO)

HSP 1 Score: 48.9 bits (115), Expect = 8.790e-5
Identity = 27/62 (43.55%), Postives = 36/62 (58.06%), Query Frame = 0
Query:   43 DPVGSISLGNLKKVANEFGHTISDAELMEMISTANYVEGLADEDEQLSNEVTFPDFYNLMTK 104
            D  G+I+L NLK+VA E G T+S+ EL EM+  A         D     E++F DFY +MTK
Sbjct:   76 DRTGTITLKNLKRVAKELGETMSEDELREMLERA---------DSNGDGEISFEDFYAIMTK 128          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13807.2983.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LB78_ECTSI1.060e-7392.62Centrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A023B8U4_GRENI1.840e-546.77Centrin, caltractin n=2 Tax=Gregarina niphandrodes... [more]
A0A4D9DEJ2_9STRA4.820e-550.85Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A086PT87_TOXGO5.730e-543.55Putative centrin n=1 Tax=Toxoplasma gondii MAS Tax... [more]
A0A086M5N1_TOXGO8.790e-543.55EF hand protein (Fragment) n=3 Tax=Toxoplasma gond... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 39..108
e-value: 7.2E-7
score: 31.2
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 46..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13807contigEcto-sp13_S_contig13807:3520..4602 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13807.2983.1mRNA_Ecto-sp13_S_contig13807.2983.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13807 3520..4602 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13807.2983.1 ID=prot_Ecto-sp13_S_contig13807.2983.1|Name=mRNA_Ecto-sp13_S_contig13807.2983.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=122bp
MQPRSARTYVRVGNLQCAARRPCANFVPRRVLFLIEIEWSLVDPVGSISL
GNLKKVANEFGHTISDAELMEMISTANYVEGLADEDEQLSNEVTFPDFYN
LMTKGRSAASTAEASPKTPGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair