mRNA_Ecto-sp13_S_contig13802.2981.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13802.2981.1 vs. uniprot
Match: D7FGU3_ECTSI (Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGU3_ECTSI) HSP 1 Score: 487 bits (1254), Expect = 1.890e-162 Identity = 243/248 (97.98%), Postives = 244/248 (98.39%), Query Frame = 1
Query: 1 MFSIASGLLVAALLSRTAQAGNWLRTSPRGNALPDGEPPASFDRRENVVFPAGVSSERDVRPALLQTNKFYSNFLLDSPARAAWTLPYIVSVNDDIPFGMSVAYPKFFEGERSEDDRLEWYATTTTKDIILSAVELHTNQEATLTDFDDQGFTAFVSFSSAMVDGSMKTWLVRGMAYATVMYDDFTPEVSSIHAILSVNGNGVADQTHTSSDGRFVLELNDLTTWILYSSDTSLELEYEPAVDDTPSV 744
M SIASGLLVAALLSRTAQAGNWLRTSPRGNALPDGEPPASFDRRENVVFPAGVSSERDVRPALLQTNKFYSNFLLD PARAAWTLPYIVSVNDD PFGMSVAYPKFFEGERSEDDRLEWYATTTTKDI+LSAVELHTNQEATLTDFDDQGFTAFVSFSSAMVDGSMKTWLVRGMAYATVMYDDFTPEVSSIHAILSVNGN VADQTHTSSDGRFVLELNDLTTWILYSSDTSLELEYEPAVDDTPSV
Sbjct: 1 MLSIASGLLVAALLSRTAQAGNWLRTSPRGNALPDGEPPASFDRRENVVFPAGVSSERDVRPALLQTNKFYSNFLLDGPARAAWTLPYIVSVNDDHPFGMSVAYPKFFEGERSEDDRLEWYATTTTKDIVLSAVELHTNQEATLTDFDDQGFTAFVSFSSAMVDGSMKTWLVRGMAYATVMYDDFTPEVSSIHAILSVNGNAVADQTHTSSDGRFVLELNDLTTWILYSSDTSLELEYEPAVDDTPSV 248
BLAST of mRNA_Ecto-sp13_S_contig13802.2981.1 vs. uniprot
Match: A0A6H5JGT8_9PHAE (Glyco_hydro_81 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGT8_9PHAE) HSP 1 Score: 346 bits (887), Expect = 9.960e-119 Identity = 171/179 (95.53%), Postives = 175/179 (97.77%), Query Frame = 1
Query: 1 MFSIASGLLVAALLSRTAQAGNWLRTSPRGNALPDGEPPASFDRRENVVFPAGVSSERDVRPALLQTNKFYSNFLLDSPARAAWTLPYIVSVNDDIPFGMSVAYPKFFEGERSEDDRLEWYATTTTKDIILSAVELHTNQEATLTDFDDQGFTAFVSFSSAMVDGSMKTWLVRGMAYAT 537
MFSIASGLLVAALLSRTAQAGNWLRTSPRGNALPDGEPPASFDRRENVVFPAGVSSERDVRPALLQTNKFYSNFLL+ PARAAWTLPYIVSVNDD+PFGMSVAYPKFFEGERSEDDRLEWYATTTTKDI+LSAVELHTNQEATLTDFDDQGFTAFVSFSSA+VDGSMKTWLVRGM T
Sbjct: 1 MFSIASGLLVAALLSRTAQAGNWLRTSPRGNALPDGEPPASFDRRENVVFPAGVSSERDVRPALLQTNKFYSNFLLNGPARAAWTLPYIVSVNDDLPFGMSVAYPKFFEGERSEDDRLEWYATTTTKDIVLSAVELHTNQEATLTDFDDQGFTAFVSFSSALVDGSMKTWLVRGMVRPT 179
BLAST of mRNA_Ecto-sp13_S_contig13802.2981.1 vs. uniprot
Match: D8LL13_ECTSI (Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL13_ECTSI) HSP 1 Score: 312 bits (800), Expect = 3.170e-96 Identity = 152/227 (66.96%), Postives = 182/227 (80.18%), Query Frame = 1
Query: 64 NWLRTSPRGNALPDGEPPASFDRRENVVFPAGVSSERDVRPALLQTNKFYSNFLLDSPARAAWTLPYIVSVNDDIPFGMSVAYPKFFEGERSEDDRLEWYATTTTKDIILSAVELHTNQEATLTDFDDQGFTAFVSFSSA-MVDGSMKTWLVRGMAYATVMYDDFTPEVSSIHAILSVNGNGVADQTHTSSDGRFVLELNDLTTWILYSSDTSLELEYEPAVDDTPS 741
+W +PR N LP GEPPASFDRREN++ P GVSS D RPALL TNKFY+N LLDS +RAAW LPYI+++N++ PFG+ V+YP+FFEGER +DDRL+WYATTT KDIILSA EL TNQEA LTDFDD+GF+A V FSS GSM T++VRGMAYATV+Y+DFTPE+++ HAIL VNGN A HT+S GRF+LELND +TWI+YSS+ LEL Y PA DTPS
Sbjct: 25 DWSLVAPRSNTLPKGEPPASFDRRENIISPLGVSSSLDARPALLHTNKFYANLLLDSSSRAAWALPYILTINEEYPFGLYVSYPRFFEGER-QDDRLKWYATTTGKDIILSAQELRTNQEAELTDFDDEGFSATVKFSSQDTAGGSMTTYIVRGMAYATVLYEDFTPEMATQHAILRVNGNAAAGGVHTNSRGRFMLELNDGSTWIVYSSNRELELSYVPATSDTPS 250
BLAST of mRNA_Ecto-sp13_S_contig13802.2981.1 vs. uniprot
Match: D7FTA2_ECTSI (Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTA2_ECTSI) HSP 1 Score: 244 bits (623), Expect = 8.520e-71 Identity = 123/232 (53.02%), Postives = 165/232 (71.12%), Query Frame = 1
Query: 67 WLRTSPRGNALPDGEPPASFDRRENVVFPAGVS-SERDVRPALLQTNKFYSNFLLDSPARAAWTLPYIVSVNDDIPFGMSVAYPKFFEGERSEDDRLEWYATTTTKDIILSAVELHTNQEATLTDFDDQGFTAFVSFSSAMVD----GSMKTWLVRGMAYATVMYDDFTPEVSSIHAILSVNGNGVADQT--HTSSDGRFVLELNDLTTWILYSSDTSLELEYEPAVDDTPS 741
W P +ALP PP SF+R N V P G S + RPA LQTNKFYSNFL+D P++AAWTLPY+V+VN + PFGM V++P++F G+ ++D RL+WYAT++ KD+I++A EL+ N A ++ FD G +A ++F+S + GSM T+LVRGMAYATV+Y+DF+PE+SSIHA+L VNG G+ D HTS DGRF LELND + WILYSSD ++E Y A + P+
Sbjct: 16 WDLVVPSTSALPSISPPESFNRSVNNVLPLGTSVGLSEARPARLQTNKFYSNFLIDGPSKAAWTLPYLVTVNSEYPFGMYVSHPRYFPGQFADDGRLKWYATSSNKDLIMTAQELNANHVAVISAFDPSGLSADITFTSEDQENNTGGSMTTFLVRGMAYATVVYEDFSPEISSIHAMLRVNGRGINDGNGNHTSPDGRFELELNDGSLWILYSSDPAVEFHYVSAQPNEPN 247
BLAST of mRNA_Ecto-sp13_S_contig13802.2981.1 vs. uniprot
Match: A0A818QJ38_9BILA (Endo-1,3(4)-beta-glucanase n=6 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A818QJ38_9BILA) HSP 1 Score: 102 bits (255), Expect = 2.900e-21 Identity = 70/207 (33.82%), Postives = 109/207 (52.66%), Query Frame = 1
Query: 115 PASFDRRENVVFPAGVSSERDVRPAL-----LQTNKFYSNFLLDSPARAAWTLPYIVSVNDDIPFGMSVAYPKFFE-GERSEDDRLEWYATTTTKDIILSAVELHTNQEATLTDFDDQGFTAFVSFSSAMVDGSMKTWLVRGMAYATVMYDDFTPEVSSIHAILSVNGNGVADQTHTSSDG-RFVLELNDLTTWILYSSDTSLELEY 714
P S R ++ +P V + R L L TNKFY+N LL + T P+++ +N + P+G+S++ + G + R++++ K+I +SA E T Q+ + D DD GF+ + S+ +VRGMAY T Y+ TP++S+ HAILSVNG QT G RF + LN+ TWILY+ + + LE+
Sbjct: 24 PISTTRPDSTFYPNIVHPRQPQRLKLSQKRPLHTNKFYTNPLLGPGSNPIITHPFVLFMNLESPYGISISCTEQLSFGPHIDSTRVKYFINVILKNIQVSATEFST-QKFEIIDVDDPGFSLTLKMYQENSQSSIIMPIVRGMAYVTFEYNSATPKISTTHAILSVNG-----QTSGRLTGKRFEIVLNNQQTWILYTLNGDITLEF 224
BLAST of mRNA_Ecto-sp13_S_contig13802.2981.1 vs. uniprot
Match: A0A817GCP2_9BILA (Endo-1,3(4)-beta-glucanase n=4 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817GCP2_9BILA) HSP 1 Score: 101 bits (251), Expect = 7.840e-21 Identity = 64/194 (32.99%), Postives = 105/194 (54.12%), Query Frame = 1
Query: 139 NVVFPAGVSSERDVRPALLQTNKFYSNFLLDSPARAAWTLPYIVSVNDDIPFGMSVAYPKFFE-GERSEDDRLEWYATTTTKDIILSAVELHTNQEATLTDFDDQGFTAFVSFSSAMVDGSMKTWLVRGMAYATVMYDDFTPEVSSIHAILSVNGNGVADQTHTSSDG-RFVLELNDLTTWILYSSDTSLELEY 714
N+V P + L TNKFY+N LL + T P+++ +N + P+G+S++ + F G R + R++++ K+I +SA E ++Q+ + D DD GF + S+ +VRGM Y T ++ TP++S++HAILSVNG QT G RF + LN+ TW+LY+ + + LE+
Sbjct: 37 NIVHPRQPQRLNLSQKRALHTNKFYTNPLLGPGSNPIITHPFVLLMNLESPYGISISCTEQFALGPRIDSTRVKYFINIILKNIQVSATEF-SSQKFEIIDVDDPGFALTLKMYQQNSQSSIIMPIVRGMTYVTFEFNSATPKISTVHAILSVNG-----QTSGKITGKRFEIVLNNDQTWLLYTLNGDITLEF 224
BLAST of mRNA_Ecto-sp13_S_contig13802.2981.1 vs. uniprot
Match: A0A817YVJ6_9BILA (Endo-1,3(4)-beta-glucanase n=3 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817YVJ6_9BILA) HSP 1 Score: 100 bits (249), Expect = 8.880e-21 Identity = 60/179 (33.52%), Postives = 104/179 (58.10%), Query Frame = 1
Query: 193 LQTNKFYSNFLL----DSPARAAWTLPYIVSVNDDIPFGMSVAYPKFFE-GERSEDDRLEWYATTTTKDIILSAVELHTNQEATLTDFDDQGFTAFVSFSSAMVDGSMKTWLVRGMAYATVMYDDFTPEVSSIHAILSVNGNGVADQTHTSSDGRFVLELNDLTTWILYSSDTSLELEY 714
L TNKFYSN +L D+P T PY++ +N D P+G+S+++ + + G + + R++++ + K+I +SA+E ++Q +TD D+ GF + ++ L+RGMAY T + TP +S+IH++LSVNG + T RF + LN+ TW+LY+ D ++ L++
Sbjct: 55 LHTNKFYSNAILGANGDNPLL---THPYVILMNKDSPYGVSISFTEEWSYGPQIDSTRVKYFVNSIVKNIQMSALEF-SSQSFEVTDVDEPGFACTIKMYQQNSPTTITMPLIRGMAYVTFEFVSATPRISTIHSMLSVNGQISGNITGK----RFEIVLNNNQTWLLYAIDGNITLKF 225
BLAST of mRNA_Ecto-sp13_S_contig13802.2981.1 vs. uniprot
Match: A0A820SJD9_9BILA (Endo-1,3(4)-beta-glucanase n=5 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A820SJD9_9BILA) HSP 1 Score: 100 bits (250), Expect = 1.320e-20 Identity = 64/194 (32.99%), Postives = 105/194 (54.12%), Query Frame = 1
Query: 139 NVVFPAGVSSERDVRPALLQTNKFYSNFLLDSPARAAWTLPYIVSVNDDIPFGMSVAYPKFFE-GERSEDDRLEWYATTTTKDIILSAVELHTNQEATLTDFDDQGFTAFVSFSSAMVDGSMKTWLVRGMAYATVMYDDFTPEVSSIHAILSVNGNGVADQTHTSSDG-RFVLELNDLTTWILYSSDTSLELEY 714
N+V P + L TNKFY+N LL + T P+++ +N + P+G+S++ + F G R + R++++ K+I +SA E ++Q+ + D DD GF + S+ +VRGM Y T ++ TP++S++HAILSVNG QT G RF + LN+ TW+LY+ + + LE+
Sbjct: 37 NIVHPRQPQRLNLPQKRALHTNKFYTNPLLGPGSNPIITHPFVLFMNLESPYGISISCTEQFALGPRIDSTRVKYFINIILKNIQVSATEF-SSQKFEIIDVDDPGFALTLKMYQQNSQSSIIMPIVRGMTYVTFEFNSATPKISTVHAILSVNG-----QTSGRITGKRFEIVLNNDQTWLLYTLNGDITLEF 224
BLAST of mRNA_Ecto-sp13_S_contig13802.2981.1 vs. uniprot
Match: A0A814KIZ1_9BILA (Endo-1,3(4)-beta-glucanase n=4 Tax=Rotaria sordida TaxID=392033 RepID=A0A814KIZ1_9BILA) HSP 1 Score: 97.1 bits (240), Expect = 2.810e-19 Identity = 59/175 (33.71%), Postives = 96/175 (54.86%), Query Frame = 1
Query: 193 LQTNKFYSNFLLDSPARAAWTLPYIVSVNDDIPFGMSVAYPKFFE-GERSEDDRLEWYATTTTKDIILSAVELHTNQEATLTDFDDQGFTAFVSFSSAMVDGSMKTWLVRGMAYATVMYDDFTPEVSSIHAILSVNGNGVADQTHTSSDGRFVLELNDLTTWILYSSDTSLELEY 714
L TNKFY+N LL T P+++ +N + P+G+S++ + G++ + R++++ K+I +SA E T Q + + DD GF + S+ +VRGMAY T Y+ TP++S+ HAILSVNG + S RF + LN+ TW+LY+ + + LE+
Sbjct: 55 LHTNKFYTNPLLGPGNNPIITHPFVLFMNLESPYGISISCTEQLALGQQIDSTRVKYFINVILKNIQVSATEF-TAQNFEIINVDDPGFALTLKMRQQNSQSSITMPIVRGMAYVTFEYNSATPKISTTHAILSVNGQA----SGRISGKRFEIALNNGQTWLLYTLNGDITLEF 224
BLAST of mRNA_Ecto-sp13_S_contig13802.2981.1 vs. uniprot
Match: A0A6H5JFJ7_9PHAE (Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFJ7_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 1.320e-18 Identity = 46/55 (83.64%), Postives = 48/55 (87.27%), Query Frame = 1
Query: 580 AILSVNGNGVADQTHTSSDGRFVLELNDLTTWILYSSDTSLELEYEPAVDDTPSV 744
A + + VADQTHTSSDGRFVLELNDLTTWILYSSD SLELEYEPAVDDTPSV
Sbjct: 2 ASMKTHLQAVADQTHTSSDGRFVLELNDLTTWILYSSDASLELEYEPAVDDTPSV 56 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13802.2981.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13802.2981.1 >prot_Ecto-sp13_S_contig13802.2981.1 ID=prot_Ecto-sp13_S_contig13802.2981.1|Name=mRNA_Ecto-sp13_S_contig13802.2981.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=249bp MFSIASGLLVAALLSRTAQAGNWLRTSPRGNALPDGEPPASFDRRENVVFback to top mRNA from alignment at Ecto-sp13_S_contig13802:6..2764- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13802.2981.1 ID=mRNA_Ecto-sp13_S_contig13802.2981.1|Name=mRNA_Ecto-sp13_S_contig13802.2981.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2759bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13802:6..2764- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13802:6..2764- >mRNA_Ecto-sp13_S_contig13802.2981.1 ID=mRNA_Ecto-sp13_S_contig13802.2981.1|Name=mRNA_Ecto-sp13_S_contig13802.2981.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=747bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13802:6..2764- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |