prot_Ecto-sp13_S_contig13792.2977.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13792.2977.1
Unique Nameprot_Ecto-sp13_S_contig13792.2977.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length105
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13792.2977.1 vs. uniprot
Match: D7FXS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXS2_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 1.960e-14
Identity = 33/38 (86.84%), Postives = 35/38 (92.11%), Query Frame = 0 
Query:   66 REVTWGRPAWLLLDTCLVFAKVKRFLVRRDTVVDGVVW 103
            REVTWGRPAWLL D CLVFAKV+RFLVR+DTVVD VVW
Sbjct:   88 REVTWGRPAWLLSDICLVFAKVERFLVRQDTVVDDVVW 125
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13792.2977.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FXS2_ECTSI1.960e-1486.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13792contigEcto-sp13_S_contig13792:3913..4227 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13792.2977.1mRNA_Ecto-sp13_S_contig13792.2977.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13792 3672..4282 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13792.2977.1 ID=prot_Ecto-sp13_S_contig13792.2977.1|Name=mRNA_Ecto-sp13_S_contig13792.2977.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=105bp
MSGAHRQRSFSWRLGSFVSRAGTCLRCILLSTTRTSLPACGTIMLLRRLA
QEQNGPALRGCRCFGREVTWGRPAWLLLDTCLVFAKVKRFLVRRDTVVDG
VVWR*
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