mRNA_Ecto-sp13_S_contig1379.2974.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1379.2974.1 vs. uniprot
Match: D8LTF8_ECTSI (Steroid-5-alpha-reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTF8_ECTSI) HSP 1 Score: 522 bits (1344), Expect = 7.410e-182 Identity = 251/262 (95.80%), Postives = 254/262 (96.95%), Query Frame = 1
Query: 1 MVVSAGDGEADLLAKWMIVAAVGTLGACSAVAPPYGRYSRAVIFGIRFPLLDAKLGWILMECPNVLISLWFLLYGSDEACLKSPANLALLSMFVLHYVNRSFVFPFRTRGGRPMPVAMMLFGALFVSINSYLQCTHLLRSRVYPNSWFVDPRFITGAATFSAGMFINCQSDGILRRLRGPGETGYKIPEGGMFAYVSGANYFGECVEWIGFAIAGWSLPATAFALYTLSNLAPRARKHHLWYLEKFREGYPAGRKALVPFVW 786
MV SAGDGEADLLAKWMIVAAVGTLGACSAVAPPYGRYSRAVIFGIRFPLLDAKLGWILMECPNVL+SLWFLLYGSDE CLKSP NLALLSMFVLHYVNRSFVFPFRTRGGRPMPV MMLFGALFVSINSYLQCTHLLRSR+YPNSWF DPRFI GAATFSAGMFINCQSDGILRRLR PGETGYKIP+GGMFAYVSGANYFGECV WIGFAIAGWSLPATAFALYTLSNLAPRARKHHLWYLEKFREGYPAGRKALVPFVW
Sbjct: 1 MVFSAGDGEADLLAKWMIVAAVGTLGACSAVAPPYGRYSRAVIFGIRFPLLDAKLGWILMECPNVLMSLWFLLYGSDETCLKSPVNLALLSMFVLHYVNRSFVFPFRTRGGRPMPVPMMLFGALFVSINSYLQCTHLLRSRIYPNSWFGDPRFIIGAATFSAGMFINCQSDGILRRLRRPGETGYKIPQGGMFAYVSGANYFGECVGWIGFAIAGWSLPATAFALYTLSNLAPRARKHHLWYLEKFREGYPAGRKALVPFVW 262
BLAST of mRNA_Ecto-sp13_S_contig1379.2974.1 vs. uniprot
Match: A0A7S2XZJ2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZJ2_9STRA) HSP 1 Score: 255 bits (652), Expect = 1.150e-77 Identity = 124/229 (54.15%), Postives = 153/229 (66.81%), Query Frame = 1
Query: 100 PYGRYSRAVIFGIRFPLLDAKLGWILMECPNVLISLWFLLYGSDEACLKSPANLALLSMFVLHYVNRSFVFPFRTRGGRPMPVAMMLFGALFVSINSYLQCTHLLRSRVYPNSWFVDPRFITGAATFSAGMFINCQSDGILRRLRGPGETGYKIPEGGMFAYVSGANYFGECVEWIGFAIAGWSLPATAFALYTLSNLAPRARKHHLWYLEKFREGYPAGRKALVPFVW 786
PYGRYS +G PL++AKL WI ME PN++++ L G ++ L S NL L S FV HY+NR+ VFP R R G+PMP+++M+ F IN YLQ +L +VY W D RF+ G F AG IN SDGILR+LR +GYKIP GGMF YVSGAN+FGE VEW GF AGWSLPATAFA +T N+ PRA +HH WY +KF+E YP RKAL+PF+W
Sbjct: 33 PYGRYSEEKKWG---PLINAKLAWITMEMPNLVLAAVCFLSG-EKPNLTSLPNLILSSAFVAHYINRTLVFPMRMRSGKPMPLSIMIMAFTFCCINGYLQARYLCSLKVYNEDWLADGRFLFGITLFLAGFAINMHSDGILRKLRTNNSSGYKIPRGGMFEYVSGANFFGEIVEWTGFTFAGWSLPATAFAFFTFCNIGPRAIQHHEWYQQKFKEDYPKCRKALIPFLW 257
BLAST of mRNA_Ecto-sp13_S_contig1379.2974.1 vs. uniprot
Match: L8GZ51_ACACA (3oxo-5-alpha-steroid 4-dehydrogenase 1, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GZ51_ACACA) HSP 1 Score: 251 bits (641), Expect = 8.050e-76 Identity = 127/248 (51.21%), Postives = 160/248 (64.52%), Query Frame = 1
Query: 49 MIVAAVGTLGACSAVAPPYGRYSRAV--IFGIRFPLLDAKLGWILMECPNVLISLWFLLYGSDEACLKSPANLALLSMFVLHYVNRSFVFPFRTRGGRPMPVAMMLFGALFVSINSYLQCTHLLRSRVYPNSWFVDPRFITGAATFSAGMFINCQSDGILRRLRGPGETGYKIPEGGMFAYVSGANYFGECVEWIGFAIAGWSLPATAFALYTLSNLAPRARKHHLWYLEKFREGYPAGRKALVPFVW 786
MI + + T A A PYGRYS ++G P + A+L W+L ECP+V + L LL+GS EA L N L+ +F++HY+ RSFVFPF RGG+P P ++L +F N Y+Q + R VY + W DPRFI G F AGMFIN Q+D ILR LR PGET YKIP GGMF YVSGAN+FGE +EW GFA+A WS+ A AFA +T SN PR +HH WY +KF + YP RK ++PFVW
Sbjct: 30 MIGSGLVTFVASQATRAPYGRYSHEAGNMYG---PPVPARLAWMLQECPSVFVPLICLLFGS-EASLAGLVNCVLVGLFLVHYIQRSFVFPFLIRGGKPTPAVLVLMAFVFCLGNGYMQGRYHTRYAVYADDWVYDPRFIVGIVLFFAGMFINIQADSILRNLRKPGETAYKIPRGGMFEYVSGANFFGEILEWTGFALASWSVVAFAFAFFTFSNTGPRGVQHHQWYQKKFND-YPKTRKGVIPFVW 272
BLAST of mRNA_Ecto-sp13_S_contig1379.2974.1 vs. uniprot
Match: UPI000854EC10 (3-oxo-5-alpha-steroid 4-dehydrogenase 1 n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI000854EC10) HSP 1 Score: 239 bits (609), Expect = 2.550e-71 Identity = 120/252 (47.62%), Postives = 161/252 (63.89%), Query Frame = 1
Query: 31 DLLAKWMIVAAVGTLGACSAVAPPYGRYSRAVIFGIRFPLLDAKLGWILMECPNVLISLWFLLYGSDEACLKSPANLALLSMFVLHYVNRSFVFPFRTRGGRPMPVAMMLFGALFVSINSYLQCTHLLRSRVYPNSWFVDPRFITGAATFSAGMFINCQSDGILRRLRGPGETGYKIPEGGMFAYVSGANYFGECVEWIGFAIAGWSLPATAFALYTLSNLAPRARKHHLWYLEKFREGYPAGRKALVPFVW 786
DLL+ M++ + + + PYGRY+ + FG P + +L W + E P++++S + Y S + L +PA L L+ F+ HY+ R+ +FPF RGG+P P+A F N YLQ ++L + P++W DPRFI G+ F GMFIN SD ILR LR PGETGYKIP GG+F YVSGAN+FGE VEW GFA+AGWS P AFA++T+ L RA++HH WYLEKF + YP RK LVPFV+
Sbjct: 13 DLLSLVMVLMGLLSFAFLRFIRMPYGRYASST-FG---PPIPVRLAWFIQELPSLVVSFY---YVSSQPELPTPA-LVLMGFFICHYIQRTLIFPFLIRGGKPTPLASFALAFTFCCYNGYLQSSYLCKHATLPSNWTHDPRFIAGSVLFFCGMFINVYSDHILRNLRKPGETGYKIPHGGLFEYVSGANFFGEIVEWSGFAVAGWSTPGAAFAIFTVLVLLSRAQQHHQWYLEKF-DNYPKSRKILVPFVY 255
BLAST of mRNA_Ecto-sp13_S_contig1379.2974.1 vs. uniprot
Match: K4FYJ5_CALMI (3-oxo-5-alpha-steroid 4-dehydrogenase n=2 Tax=Callorhinchus milii TaxID=7868 RepID=K4FYJ5_CALMI) HSP 1 Score: 236 bits (601), Expect = 6.680e-70 Identity = 126/260 (48.46%), Postives = 160/260 (61.54%), Query Frame = 1
Query: 16 GDGEADLLAK--W-MIVAAVGTLGACSAVAPPYGRYSRAVIFGIRFPLLDAKLGWILMECPNVLISLWFLLYGSDEACLKSPANLALLSMFVLHYVNRSFVFPFRTRGGRPMPVAMMLFGALFVSINSYLQCTHLLRSRVYPNSWFVDPRFITGAATFSAGMFINCQSDGILRRLRGPGETGYKIPEGGMFAYVSGANYFGECVEWIGFAIAGWSLPATAFALYTLSNLAPRARKHHLWYLEKFREGYPAGRKALVPFVW 786
GDGE LL + W MI+ V PYGR++ FG FP+ KL W + E P +++ L+ L + A NL LLSMF +HY++R+F+FPF RGG+ P + F N YLQ +L R +YP W DPRF+TG A + +G+ +N SD ILR LR PGETGYKIP GGMF YV+GAN+ GE VEW GFAIA WSLP+ AFA++T L RA +HH WYLEKF E YP RKAL+PF++
Sbjct: 18 GDGELLLLRRLSWLMILTGAAAFLLLQFVDLPYGRFASRK-FG--FPV-HVKLAWCVQEAPAMVLPLYLGLCSAGSASSLQRPNLVLLSMFTIHYIHRAFMFPFLIRGGKATPFIPFILAFTFCVYNGYLQGRYLSRFAIYPADWITDPRFLTGLAVWLSGLLLNVTSDHILRNLRKPGETGYKIPRGGMFEYVTGANFLGEIVEWTGFAIACWSLPSAAFAVFTFMVLISRASQHHRWYLEKF-EDYPTSRKALIPFLY 272
BLAST of mRNA_Ecto-sp13_S_contig1379.2974.1 vs. uniprot
Match: L1JHA2_GUITC (S5A_REDUCTASE domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JHA2_GUITC) HSP 1 Score: 238 bits (606), Expect = 1.020e-69 Identity = 115/235 (48.94%), Postives = 159/235 (67.66%), Query Frame = 1
Query: 85 SAVAPPYGRYSR--AVIFGIRFPLLDAKLGWILMECPNVLISLWFLLYGSDEACLKSPANLALLSMFVLHYVNRSFVFPFRTRGGRPMPVAMMLFGALFVSINSYLQCTHLLRSRVYPNSWFVDPRFITGAATFSAGMFINCQSDGILRRLRGPGETGYKIPEGGMFAYVSGANYFGECVEWIGFAIAGWSLPATAFALYTLSNLAPRARKHHLWYLEKFREGYPAGRKALVPFV 783
S V YGRY+ + ++G + ++A++ W L E P V+I + +L + + ++S AN LL++F+ HYVNR+ ++P+RTRG +P P+++ML LF +N Y+Q L + Y SWF+DPRF G F GM IN QSD ILRRLR PGE GYKIP GGMF +VSGAN+ GE +EW GFA+A W+L + AFA++T N+APRA HHLWYL KF + YP RKA++PF+
Sbjct: 111 SGVRVVYGRYATDCSWLWGFK---INARIAWFLQEVPCVIIGMSNILTANHDV-MQSTANTILLALFMAHYVNRALLYPWRTRGSKPTPLSVMLMAWLFCVVNGYMQTRMLTHVKKYEESWFIDPRFGIGVTIFFCGMLINFQSDDILRRLRKPGEVGYKIPRGGMFRFVSGANFLGEIIEWTGFAVASWTLQSAAFAVFTFCNIAPRAYHHHLWYLSKFPD-YPKRRKAVIPFI 340
BLAST of mRNA_Ecto-sp13_S_contig1379.2974.1 vs. uniprot
Match: V3ZTF2_LOTGI (3-oxo-5-alpha-steroid 4-dehydrogenase (NADP(+)) n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3ZTF2_LOTGI) HSP 1 Score: 233 bits (593), Expect = 6.500e-69 Identity = 117/231 (50.65%), Postives = 153/231 (66.23%), Query Frame = 1
Query: 91 VAPPYGRYSRAVIFGIRFPLLDAKLGWILMECPNVLISLWFLLYGSDEACLKSPANLALLSMFVLHYVNRSFVFPFRTRGGRPMPVAMMLFGALFVSINSYLQCTHLLRSRVYPNSWFVDPRFITGAATFSAGMFINCQSDGILRRLRGPGETGYKIPEGGMFAYVSGANYFGECVEWIGFAIAGWSLPATAFALYTLSNLAPRARKHHLWYLEKFREGYPAGRKALVPFV 783
V+ PYGRYSR G F + +AK+ W + E P++LI + +LY +D L+ N L+S+F LHY+ RS V+PF +GG+P P+ L +F +IN YLQ +L + Y N WF RFI G F GMFIN QSD ILR LR PGETGYKIP+GGMF YVSGAN+ GE +EW GFA++ W+ A FA +T+ N+ PRA +HH WY +KF + YPA RKAL+PF+
Sbjct: 34 VSAPYGRYSRG---GWGFTI-NAKVAWFIQEVPSILIPIGIMLY-TDCPKLQYTPNRILISLFSLHYIQRSLVYPFLIKGGKPTPLIPFLLALVFCTINGYLQFNYLAKYADYGNDWF-SLRFIAGVMLFFTGMFINLQSDSILRNLRKPGETGYKIPKGGMFEYVSGANFLGEIIEWCGFALSVWASSAAVFACFTICNIGPRALQHHRWYQKKF-DNYPAKRKALIPFI 257
BLAST of mRNA_Ecto-sp13_S_contig1379.2974.1 vs. uniprot
Match: A5D8N5_XENLA (3-oxo-5-alpha-steroid 4-dehydrogenase (NADP(+)) n=2 Tax=Xenopus TaxID=8353 RepID=A5D8N5_XENLA) HSP 1 Score: 232 bits (592), Expect = 8.840e-69 Identity = 120/252 (47.62%), Postives = 156/252 (61.90%), Query Frame = 1
Query: 31 DLLAKWMIVAAVGTLGACSAVAPPYGRYSRAVIFGIRFPLLDAKLGWILMECPNVLISLWFLLYGSDEACLKSPANLALLSMFVLHYVNRSFVFPFRTRGGRPMPVAMMLFGALFVSINSYLQCTHLLRSRVYPNSWFVDPRFITGAATFSAGMFINCQSDGILRRLRGPGETGYKIPEGGMFAYVSGANYFGECVEWIGFAIAGWSLPATAFALYTLSNLAPRARKHHLWYLEKFREGYPAGRKALVPFVW 786
+LLA +M + + + + PYGRY+ +V FG P + +L W + E P++ I ++F L S+ AN L+ + HY+ R+ VFPF RGG+P P A +F N Y+Q ++L Y + W DP FITG F GMFIN SD ILR LR PGETGYKIP GG+F YVSGAN+FGE +EW GFA+AGWSLPA AFA++T L RA++HH WYLEKF E YP RK LVPF++
Sbjct: 15 NLLAMFMALMGLVSYAMLQYIRMPYGRYATSV-FG---PPVPVRLAWFVQEVPSLFIPVFFYLRQSELGI----ANQVLMGALICHYIQRTLVFPFLIRGGKPTPFASFALAFIFCCYNGYMQSSYLCHYAFYASDWIHDPCFITGIMLFFCGMFINIYSDRILRNLRKPGETGYKIPTGGLFDYVSGANFFGEILEWSGFALAGWSLPAAAFAIFTAFVLTSRAQQHHKWYLEKF-EDYPKNRKILVPFLY 257
BLAST of mRNA_Ecto-sp13_S_contig1379.2974.1 vs. uniprot
Match: A0A401P450_SCYTO (3-oxo-5-alpha-steroid 4-dehydrogenase (NADP(+)) n=2 Tax=Scyliorhinus TaxID=7829 RepID=A0A401P450_SCYTO) HSP 1 Score: 232 bits (592), Expect = 1.000e-68 Identity = 118/257 (45.91%), Postives = 159/257 (61.87%), Query Frame = 1
Query: 19 DGEADLLAKW-MIVAAVGTLGACSAVAPPYGRYSRAVIFGIRFPLLDAKLGWILMECPNVLISLWFLLYGSDEACLKSPANLALLSMFVLHYVNRSFVFPFRTRGGRPMPVAMMLFGALFVSINSYLQCTHLLRSRVYPNSWFVDPRFITGAATFSAGMFINCQSDGILRRLRGPGETGYKIPEGGMFAYVSGANYFGECVEWIGFAIAGWSLPATAFALYTLSNLAPRARKHHLWYLEKFREGYPAGRKALVPFVW 786
+ E L + W M++ V T C V PYGRY+ FG ++ K W + E P++ + L+ + + +D L+ P N LL MF+ HY++RS +FPF RGG+ P F N YLQ L + VYP+ W +PRF+TG + G+ +N SD ILR+LR PGETGYKIP GGMF YVSGAN+ GE +EWIGFA+A WSLP+ AFA++ L L+ RA +HH WYLEKF E YP RKA++PF++
Sbjct: 11 ESEMLLRSSWLMVLMGVCTFLICQFVDLPYGRYAHGK-FGFA---VNVKAAWFIQETPSLALPLYLMFFSTDTNPLQLP-NQLLLGMFICHYIHRSLIFPFLIRGGKATPFISFALAFTFCLYNGYLQARFLSKYAVYPSDWITNPRFLTGFVLWFFGLSVNLHSDHILRKLRKPGETGYKIPHGGMFEYVSGANFLGEIIEWIGFAMACWSLPSAAFAVFGLFVLSSRAAQHHRWYLEKF-EDYPKSRKAIIPFLY 261
BLAST of mRNA_Ecto-sp13_S_contig1379.2974.1 vs. uniprot
Match: B9A122_GLARU (3-oxo-5-alpha-steroid 4-dehydrogenase (NADP(+)) n=3 Tax=Ranidae TaxID=8397 RepID=B9A122_GLARU) HSP 1 Score: 231 bits (590), Expect = 1.640e-68 Identity = 118/259 (45.56%), Postives = 164/259 (63.32%), Query Frame = 1
Query: 19 DGEA---DLLAKWMIVAAVGTLGACSAVAPPYGRYSRAVIFGIRFPLLDAKLGWILMECPNVLISLWFLLYGSDEACLKSPANLALLSMFVLHYVNRSFVFPFRTRGGRPMPVAMMLFGALFVSINSYLQCTHLLRSRVYPNSWFVDPRFITGAATFSAGMFINCQSDGILRRLRGPGETGYKIPEGGMFAYVSGANYFGECVEWIGFAIAGWSLPATAFALYTLSNLAPRARKHHLWYLEKFREGYPAGRKALVPFVW 786
+GEA DLL+ M++ + + + PYGRY+ + FG P + +L W + E P++++ ++++ + D L +PA L L+ +F+ HY++R+ +FPF RGG+P P+ +F N YLQ ++L + + W DPRFI G A F GM IN SD ILR LR PGE+GYKIP GG+F YVSGAN+FGE EW GFA+AGWS P AFA++TL L RA++HH WYLEKF + YP RK LVPFV+
Sbjct: 6 EGEARLLDLLSLLMVLMGLLSFALLRCIRVPYGRYASSA-FG---PPVPVRLAWFIQELPSLVVPVYYVSFHPD---LPTPA-LLLMGLFICHYMHRTLIFPFLIRGGKPTPLVPFALAFIFCCYNGYLQSSYLCKHSTFHPGWTYDPRFIAGLALFFCGMSINIYSDHILRNLRKPGESGYKIPHGGLFEYVSGANFFGEIAEWSGFAVAGWSTPGAAFAIFTLLVLLSRAQQHHQWYLEKF-DNYPKTRKILVPFVY 255 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1379.2974.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1379.2974.1 >prot_Ecto-sp13_S_contig1379.2974.1 ID=prot_Ecto-sp13_S_contig1379.2974.1|Name=mRNA_Ecto-sp13_S_contig1379.2974.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=263bp MVVSAGDGEADLLAKWMIVAAVGTLGACSAVAPPYGRYSRAVIFGIRFPLback to top mRNA from alignment at Ecto-sp13_S_contig1379:1023..8660- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1379.2974.1 ID=mRNA_Ecto-sp13_S_contig1379.2974.1|Name=mRNA_Ecto-sp13_S_contig1379.2974.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7638bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1379:1023..8660- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1379:1023..8660- >mRNA_Ecto-sp13_S_contig1379.2974.1 ID=mRNA_Ecto-sp13_S_contig1379.2974.1|Name=mRNA_Ecto-sp13_S_contig1379.2974.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=789bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1379:1023..8660- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |