prot_Ecto-sp13_S_contig13789.2973.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig13789.2973.1
Unique Name	prot_Ecto-sp13_S_contig13789.2973.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	405

Homology

[Close]

BLAST of mRNA_Ecto-sp13_S_contig13789.2973.1 vs. uniprot
Match: D7G2P0_ECTSI (SnoaL-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2P0_ECTSI)

HSP 1 Score: 481 bits (1238), Expect = 5.050e-165
Identity = 342/406 (84.24%), Postives = 348/406 (85.71%), Query Frame = 0

Query:    1 MPSNDVMCIHPGDEPVLGQQAVARSWRSLFRSGDGRFSSSVIKPTDVRIRVRGTTAIVQCNEEVTSRQNAAAXXXXXXXXXXXXTDPTLRSFSPAPSALSSFGSYSKADDGDGGSS-FGDNPKHKDPAAWLAHVISENPYEPGSEKSIVSNPTTPEDRARIKKAVGKHGAASIKKAVAAAFAQSDEETRLANLAKRSKKGGPSLSGGRGGSERKSKVKPRVLNVTNIYRKAGGKWLMVHHHASLPPTGRSGSSRRVAMGIDGMKDGLEGMPRIINLSDQGGGFGVGGGSSKDNRLEEMLXXXXXXXXXXXXXXXGGTGAGRTPSGGMIIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGKGSRWRREELPLTEDLTKKTIQ 405
            MPSNDVMCIHPGDEPVLGQQAVARSWRSLFRSGDGRFSSSVIKPTDVRIRVRGTTAIVQCNEEVTSRQNA  XXXXXXXXXXXX     RSFS                        FGD+PKHKDPAAWLAHVISENPYEPGSEKSIVSNPTTPEDRARIKKAVGKHGAASIKKAVAAAFAQSDEETRLANLAKRSKKGG  LS     SER+SK+KPRVLNVTNIYRKAGGKWLMVHHHASLPPTG+SGSSRRVAMGIDG+KDGLEGMPRIINLS+QGGGF       KDNRLEEML   XXXXXXXXXXXXGGTGAGRTPSGGMIII  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        EGKGSRWRREELPLTEDLTKKTIQ
Sbjct:   17 MPSNDVMCIHPGDEPVLGQQAVARSWRSLFRSGDGRFSSSVIKPTDVRIRVRGTTAIVQCNEEVTSRQNAXXXXXXXXXXXXXXXXXXXRSFSXXXXXXXXXXXXXXXXXXXXXXXXFGDDPKHKDPAAWLAHVISENPYEPGSEKSIVSNPTTPEDRARIKKAVGKHGAASIKKAVAAAFAQSDEETRLANLAKRSKKGGAFLSXXXXXSERRSKIKPRVLNVTNIYRKAGGKWLMVHHHASLPPTGKSGSSRRVAMGIDGLKDGLEGMPRIINLSEQGGGFXXXXXXXKDNRLEEMLEALXXXXXXXXXXXXGGTGAGRTPSGGMIIIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------EGKGSRWRREELPLTEDLTKKTIQ 414

[Close]

BLAST of mRNA_Ecto-sp13_S_contig13789.2973.1 vs. uniprot
Match: A0A6H5L954_9PHAE (UVR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L954_9PHAE)

HSP 1 Score: 475 bits (1222), Expect = 4.900e-160
Identity = 340/412 (82.52%), Postives = 343/412 (83.25%), Query Frame = 0

Query:    1 MPSNDVMCIHPGDEPVLGQQAVARSWRSLFRSGDGRFSSSVIKPTDVRIRVRGTTAIVQCNEEVTSRQNAAAXXXXXXXXXXXXTDPTLRSFSPAPSALSSFGSYSKADDGDGGSSFGDNPKHKDPAAWLAHVISENPYEPGSEKSIVSNPTTPEDRARIKKAVGKHGAASIKKAVAAAFAQSDEETRLANLAKRSKKGGPSLSGGRGGSERKSKVKPRVLNVTNIYRKAGGKWLMVHHHASLPPTGRSGSSRRVAMGIDGMKD-------GLEGMPRIINLSDQGGGFGVGGGSSKDNRLEEMLXXXXXXXXXXXXXXXGGTGAGRTPSGGMIIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGKGSRWRREELPLTEDLTKKTIQ 405
            MPSNDVMCIHPGDEPVLGQQAV RSWRSLFRSGDGRFSSSVIK                CNEEVTSRQNAAA            TDPTLRSFSPAPSALSSFGS SKA D DG SSFGDNPKHKDPAAWLAHVISENPYEPGSEKSIVSNPTTPEDRARIKKAVGKHGAASIKKAVAAAFAQSDEETRLANLAKRSKKGG  LSGGRGGSER+SKVKPRVLNVTNIYRKAGGKWLMVHHHASLPP G+SGSSRRVAMGIDG+KD        LEGMPRIINLSDQGGGF                XXXXXXXXXXXXXXXGGTGAGRTPSGGMIII     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  G  SRWRREELPLTEDLTKKTIQ
Sbjct:  212 MPSNDVMCIHPGDEPVLGQQAVDRSWRSLFRSGDGRFSSSVIK----------------CNEEVTSRQNAAAAAAA--------TDPTLRSFSPAPSALSSFGSSSKAADDDGSSSFGDNPKHKDPAAWLAHVISENPYEPGSEKSIVSNPTTPEDRARIKKAVGKHGAASIKKAVAAAFAQSDEETRLANLAKRSKKGGAFLSGGRGGSERRSKVKPRVLNVTNIYRKAGGKWLMVHHHASLPPMGKSGSSRRVAMGIDGLKDVRAGAVVALEGMPRIINLSDQGGGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGTGAGRTPSGGMIIIGGGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG--SRWRREELPLTEDLTKKTIQ 597

[Close]

BLAST of mRNA_Ecto-sp13_S_contig13789.2973.1 vs. uniprot
Match: A0A836CFM1_9STRA (SnoaL-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFM1_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 5.930e-14
Identity = 34/64 (53.12%), Postives = 49/64 (76.56%), Query Frame = 0

Query:    3 SNDVMCIHPGDEPVLGQQAVARSWRSLFRSGDGRFSSSVIKPTDVRIRVRGTTAIVQCNEEVTS 66
            S+ V+C+HPG EP++G +AV ++WR +F SGD  F SSV++P  VR+ VRGT+A V C EEV++
Sbjct:   80 SDAVLCVHPGQEPLVGHEAVTKAWRGMFASGDAAFKSSVVQPKGVRVSVRGTSAWVTCTEEVSA 143

[Close]

BLAST of mRNA_Ecto-sp13_S_contig13789.2973.1 vs. uniprot
Match: A0A7S2SU46_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SU46_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 6.360e-10
Identity = 29/63 (46.03%), Postives = 46/63 (73.02%), Query Frame = 0

Query:    3 SNDVMCIHPGDEPVLGQQAVARSWRSLFRSGDGRFSSSVIKPTDVRIRVRGTTAIVQCNEEVT 65
            S    CIHPG EP+LG +++  +W ++ RS D RF +++IKPT+V++ V+G+TA + C EEV+
Sbjct:   95 SPQTCCIHPGQEPLLGHRSIMNTWDAMLRSQDTRFRNNMIKPTNVQLSVKGSTAWISCVEEVS 157

[Close]

BLAST of mRNA_Ecto-sp13_S_contig13789.2973.1 vs. uniprot
Match: A0A7S4MBM1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MBM1_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 1.670e-8
Identity = 29/65 (44.62%), Postives = 47/65 (72.31%), Query Frame = 0

Query:    6 VMCIHPGDEPVLGQQAVARSWRSLFRSGDGR--FSSSVIKPTDVRIRVRGTTAIVQCNEEVTSRQ 68
            V+C+HP   P++G  AV  SWR +F +G+G   F  +V++P+ VR+ +RG+TAI+ C+EEV +R+
Sbjct:  281 VLCVHPSHAPLVGASAVLGSWRRMFDTGEGAPAFRRNVVEPSRVRLSMRGSTAILTCDEEVYTRR 345

[Close]

BLAST of mRNA_Ecto-sp13_S_contig13789.2973.1 vs. uniprot
Match: A0A7R9ZCZ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZCZ2_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 9.970e-7
Identity = 29/78 (37.18%), Postives = 43/78 (55.13%), Query Frame = 0

Query:    7 MCIHPGDEPVLGQQAVARSWRSLF-----RSGD-----------GRFSSSVIKPTDVRIRVRGTTAIVQCNEEVTSRQ 68
            +C+HPG  P++G  AV   W+ +F      SG            G +  SV++P+ VR+ VRGTTA+V C+E V  R+
Sbjct:   10 LCVHPGHSPLVGASAVLGCWKRMFGRAATNSGSTXXXXXXXXXXGGYRRSVVEPSHVRLSVRGTTAVVTCDESVYVRR 87

[Close]

BLAST of mRNA_Ecto-sp13_S_contig13789.2973.1 vs. uniprot
Match: A0A7S3VB37_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VB37_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.760e-6
Identity = 24/62 (38.71%), Postives = 43/62 (69.35%), Query Frame = 0

Query:    7 MCIHPGDEPVLGQQAVARSWRSLFRSGDGRFSSSVIKPTDVRIRVRGTTAIVQCNEEVTSRQ 68
            +CIHP    ++G + V  S++ +F  G+  F  + ++P+++R+ V+GTTAIV C+EEV +R+
Sbjct:  203 LCIHPSSTTIIGSKNVLSSFKEMFAGGNVAFQKNKMEPSNIRMSVKGTTAIVTCDEEVYTRR 264

[Close]

BLAST of mRNA_Ecto-sp13_S_contig13789.2973.1 vs. uniprot
Match: A0A7S0YXZ8_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YXZ8_9CRYP)

HSP 1 Score: 58.5 bits (140), Expect = 2.000e-6
Identity = 25/58 (43.10%), Postives = 38/58 (65.52%), Query Frame = 0

Query:    6 VMCIHPGDEPVLGQQAVARSWRSLFRSGDGRFSSSVIKPTDVRIRVRGTTAIVQCNEE 63
            V CIHPG  PV+G + V   + ++FR+     +++ ++PT VR+ VRGT+A V C EE
Sbjct:   73 VQCIHPGLRPVVGHRQVVDMFDNMFRTKQAAAANTRVRPTKVRVHVRGTSAFVLCTEE 130

[Close]

BLAST of mRNA_Ecto-sp13_S_contig13789.2973.1 vs. uniprot
Match: A0A7S1XPG9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XPG9_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 4.490e-6
Identity = 27/63 (42.86%), Postives = 39/63 (61.90%), Query Frame = 0

Query:    3 SNDVMCIHPGDEPVLGQQAVARSWRSLFRSGDGRFSSS-VIKPTDVRIRVRGTTAIVQCNEEV 64
            ++DV CIHPG    +G +AV R+W  +F+    R     +I+  DVR+ VRGTTA+V C E +
Sbjct:  109 ADDVSCIHPGSPIKVGHKAVVRAWERMFKEDRSRQPEPHIIRAGDVRVFVRGTTAVVTCTENI 171

[Close]

BLAST of mRNA_Ecto-sp13_S_contig13789.2973.1 vs. uniprot
Match: A0A7S0LVY3_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LVY3_9CRYP)

HSP 1 Score: 56.2 bits (134), Expect = 5.730e-6
Identity = 28/68 (41.18%), Postives = 47/68 (69.12%), Query Frame = 0

Query:    3 SNDVMCIHPGDEPVLGQQAVARSWRSLFRSGDGRFSSSV-IKPTDVRIRVRGTTAIVQCNEEVTSRQN 69
            S+ V  I PG +P++G + +   W++ F   D +FSSSV I+P++VRI VRG +A V CNE++ ++++
Sbjct:   44 SSTVQFIFPGGKPLIGYRDIMAMWQNSFHLRD-KFSSSVEIRPSNVRISVRGLSAFVVCNEDMVTQKS 110

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig13789.2973.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig13789.2973.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11


Match Name	E-value	Identity	Description
D7G2P0_ECTSI	5.050e-165	84.24	SnoaL-like domain-containing protein n=1 Tax=Ectoc...	[more]
A0A6H5L954_9PHAE	4.900e-160	82.52	UVR domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A836CFM1_9STRA	5.930e-14	53.13	SnoaL-like domain-containing protein n=1 Tax=Tribo...	[more]
A0A7S2SU46_9STRA	6.360e-10	46.03	Hypothetical protein (Fragment) n=1 Tax=Rhizochrom...	[more]
A0A7S4MBM1_9STRA	1.670e-8	44.62	Hypothetical protein n=1 Tax=Odontella aurita TaxI...	[more]
A0A7R9ZCZ2_9STRA	9.970e-7	37.18	Hypothetical protein (Fragment) n=1 Tax=Pseudictyo...	[more]
A0A7S3VB37_9STRA	1.760e-6	38.71	Hypothetical protein n=1 Tax=Chaetoceros debilis T...	[more]
A0A7S0YXZ8_9CRYP	2.000e-6	43.10	Hypothetical protein (Fragment) n=1 Tax=Hemiselmis...	[more]
A0A7S1XPG9_9STRA	4.490e-6	42.86	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
A0A7S0LVY3_9CRYP	5.730e-6	41.18	Hypothetical protein (Fragment) n=1 Tax=Cryptomona...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037401	SnoaL-like domain	PFAM	PF13474	SnoaL_3	coord: 3..80 e-value: 2.3E-7 score: 31.1
None	No IPR available	GENE3D	3.10.450.50		coord: 202..251 e-value: 8.9E-10 score: 40.4 coord: 1..86 e-value: 1.6E-15 score: 59.1
None	No IPR available	PANTHER	PTHR34957	FAMILY NOT NAMED	coord: 3..68
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 330..370
IPR032710	NTF2-like domain superfamily	SUPERFAMILY	54427	NTF2-like	coord: 213..244
IPR032710	NTF2-like domain superfamily	SUPERFAMILY	54427	NTF2-like	coord: 4..70

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig13789	contig	Ecto-sp13_S_contig13789:1030..4608 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig13789.2973.1	mRNA_Ecto-sp13_S_contig13789.2973.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig13789 1030..4611 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig13789.2973.1 ID=prot_Ecto-sp13_S_contig13789.2973.1|Name=mRNA_Ecto-sp13_S_contig13789.2973.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=405bp
MPSNDVMCIHPGDEPVLGQQAVARSWRSLFRSGDGRFSSSVIKPTDVRIR
VRGTTAIVQCNEEVTSRQNAAAAAAAAAATAAAATDPTLRSFSPAPSALS
SFGSYSKADDGDGGSSFGDNPKHKDPAAWLAHVISENPYEPGSEKSIVSN
PTTPEDRARIKKAVGKHGAASIKKAVAAAFAQSDEETRLANLAKRSKKGG
PSLSGGRGGSERKSKVKPRVLNVTNIYRKAGGKWLMVHHHASLPPTGRSG
SSRRVAMGIDGMKDGLEGMPRIINLSDQGGGFGVGGGSSKDNRLEEMLEA
LRNRLPGGLPGGIGGTGAGRTPSGGMIIIGGGDDDDDEDEDDDDDEEDEE
DEDDDEEEEDEEDEADDADVTSSSSSGSSSSEGKGSRWRREELPLTEDLT
KKTIQ

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR037401	SnoaL-like
IPR016024	ARM-type_fold
IPR032710	NTF2-like_dom_sf