mRNA_Ecto-sp13_S_contig13785.2969.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13785.2969.1 vs. uniprot
Match: D7G0K0_ECTSI (Tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0K0_ECTSI) HSP 1 Score: 493 bits (1270), Expect = 8.780e-173 Identity = 230/250 (92.00%), Postives = 241/250 (96.40%), Query Frame = 1
Query: 13 QGIEFFVQMHLDGAAVKDCDHWHDDAGIVTHHVGFTLLFEQALQVVDPSVSIPYWEYTIEAALGLANYGESQVFNPDWFGDASPDNSLHTVTDGRAISLSMLALQEAWDNVHNPYGLLRAPWNTDATPFVTRYDKINGVDSTDMVTCEEFQSCFESSSIAAMNNCLNAGIHGPVHNTLGGEWNNPEEEFTFQLGYSASVAILAKALWRQGYLRVPNVCLQGRDGPGNASTCITSCPAQVYESLGMTPYDV 762
+GIEFFVQMHLDGAAVK+CDHWHDDAGIVTHHVGFTLLFEQALQVVDPSVSIPYWEYTIEAALGLANYGESQVF+P WFGDASPDNSLHTVTDGR LS++ +EAWD VHNPYGLLRAPWNTD TPFVTRYDKINGVDSTDMVTCEEFQSCFESSSIAAMNNCLNAGIHGPVHNT+GGEWNNPEEEFTF+LGYSASVAILAKALWRQGYLRVPN CLQG+DGPGNASTCITSCPA++YESLGMTPYDV
Sbjct: 80 KGIEFFVQMHLDGAAVKECDHWHDDAGIVTHHVGFTLLFEQALQVVDPSVSIPYWEYTIEAALGLANYGESQVFHPGWFGDASPDNSLHTVTDGRWAFLSIM--KEAWDYVHNPYGLLRAPWNTDGTPFVTRYDKINGVDSTDMVTCEEFQSCFESSSIAAMNNCLNAGIHGPVHNTMGGEWNNPEEEFTFRLGYSASVAILAKALWRQGYLRVPNTCLQGKDGPGNASTCITSCPAELYESLGMTPYDV 327
BLAST of mRNA_Ecto-sp13_S_contig13785.2969.1 vs. uniprot
Match: D7G0J9_ECTSI (PKD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J9_ECTSI) HSP 1 Score: 371 bits (952), Expect = 5.740e-122 Identity = 163/250 (65.20%), Postives = 201/250 (80.40%), Query Frame = 1
Query: 13 QGIEFFVQMHLDGAAVKDCDHWHDDAGIVTHHVGFTLLFEQALQVVDPSVSIPYWEYTIEAALGLANYGESQVFNPDWFGDASPDNSLHTVTDGRAISLSMLALQEAWDNVHNPYGLLRAPWNTDATPFVTRYDKINGVDSTDMVTCEEFQSCFESSSIAAMNNCLNAGIHGPVHNTLGGEWNNPEEEFTFQLGYSASVAILAKALWRQGYLRVPNVCLQGRDGPGNASTCITSCPAQVYESLGMTPYDV 762
+GI FFVQMHLDGA V DCDHWHDDAGI+THHVG+T+LFEQALQVVDPSV+IPYWEYTIE + GL +YGESQ+F PDWFGDASP+N++HTV +GR L ++ Q+AWD VHNPYGLLR PWNTD TP+VTR++ N D T +VTC +Q+CF+ +++A + NCLN G HGPVH +GGEWNNPEEE T LGY+ V ++AK LWR+GYLR+P C + G G+ STC SCP+++YE+LGMTPYDV
Sbjct: 227 KGISFFVQMHLDGAGVSDCDHWHDDAGIMTHHVGYTMLFEQALQVVDPSVTIPYWEYTIEYSQGLTDYGESQIFAPDWFGDASPNNAMHTVDNGRWAYLPVM--QDAWDYVHNPYGLLRTPWNTDPTPYVTRHNMTNAQDITGVVTCGMYQNCFDETTLAGLFNCLNGGTHGPVHIKMGGEWNNPEEELTNSLGYADEVPLMAKFLWRKGYLRMPTSCTEDEHGTGDDSTCRASCPSEIYENLGMTPYDV 474
BLAST of mRNA_Ecto-sp13_S_contig13785.2969.1 vs. uniprot
Match: A0A6H5L3M0_9PHAE (PKD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3M0_9PHAE) HSP 1 Score: 370 bits (950), Expect = 9.730e-122 Identity = 167/250 (66.80%), Postives = 197/250 (78.80%), Query Frame = 1
Query: 13 QGIEFFVQMHLDGAAVKDCDHWHDDAGIVTHHVGFTLLFEQALQVVDPSVSIPYWEYTIEAALGLANYGESQVFNPDWFGDASPDNSLHTVTDGRAISLSMLALQEAWDNVHNPYGLLRAPWNTDATPFVTRYDKINGVDSTDMVTCEEFQSCFESSSIAAMNNCLNAGIHGPVHNTLGGEWNNPEEEFTFQLGYSASVAILAKALWRQGYLRVPNVCLQGRDGPGNASTCITSCPAQVYESLGMTPYDV 762
+GI FFVQMHLDGA VKDCDHWHDDAGI+THHVG+TL FEQALQVVDPSVSIPYWEYTIE+A GL YGES +F DWFG+ASPDNSLHTV GR L A D VHNPYGLLR+PWN D TPFVTR++ NG D T MV+CE +QSCF+++++A MNNCLN G HGPVH +GGEWN+PEE+ +LGY++++ +L K LWR+GYLR P C DG G++STC CPA+VYE+LGMTPYDV
Sbjct: 225 KGINFFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQALQVVDPSVSIPYWEYTIESAQGLTEYGESTIFAADWFGEASPDNSLHTVDKGR-----WAYLPGATDYVHNPYGLLRSPWNVDGTPFVTRFNLTNGEDKTSMVSCETYQSCFDATTLATMNNCLNGGTHGPVHIKVGGEWNDPEEDMATKLGYTSAIPLLTKFLWRKGYLRTPESCTAEEDGVGDSSTCRAGCPAEVYENLGMTPYDV 469
BLAST of mRNA_Ecto-sp13_S_contig13785.2969.1 vs. uniprot
Match: D7FSP4_ECTSI (PKD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSP4_ECTSI) HSP 1 Score: 345 bits (886), Expect = 7.650e-112 Identity = 157/255 (61.57%), Postives = 196/255 (76.86%), Query Frame = 1
Query: 13 QGIEFFVQMHLDGAAVKDCDHWHDDAGIVTHHVGFTLLFEQALQVVDPSVSIPYWEYTIEAALGLANYGESQVFNPDWFGDASPDNSLHTVTDGRAISLSMLALQEAWDNVHNPYGLLRAPWNTDATPFVTRYDKINGVDSTDMVTCEEFQSCFESSSIAAMNNCLNAGIHGPVHNTLGGEWNNPEEEFTFQLG-----YSASVAILAKALWRQGYLRVPNVCLQGRDGPGNASTCITSCPAQVYESLGMTPYDV 762
+GI FFVQMHL+GA V DCDHWHDDAGI+THHVG+TLLFEQALQVVDP+V+IPYWEYTIEAA GL +Y S+VF DWFG+ASPDN LHTV GR L ++ ++AW VHNPYGLLR+PWNTD TP+VTR++ N D +V+C+++QSCF+ ++A MNNCLN G HGPVH +GGEWN+P+E LG Y+ V +++K LWR+GYLR+P C +G G+ASTC +SCPA++YES GM PYDV
Sbjct: 240 KGINFFVQMHLNGAGVSDCDHWHDDAGIMTHHVGYTLLFEQALQVVDPAVTIPYWEYTIEAAAGLEDYDSSEVFASDWFGEASPDNELHTVDKGRWAFLPVM--EDAWHYVHNPYGLLRSPWNTDPTPYVTRHNVTNNKDVQGVVSCDDYQSCFDKDNLADMNNCLNGGTHGPVHIKVGGEWNDPQEGIIQALGTLFGRYTNKVPLMSKYLWRKGYLRMPTSCSVESEGTGDASTCRSSCPAELYESKGMKPYDV 492
BLAST of mRNA_Ecto-sp13_S_contig13785.2969.1 vs. uniprot
Match: A0A6H5KFJ6_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ6_9PHAE) HSP 1 Score: 339 bits (870), Expect = 1.330e-111 Identity = 155/277 (55.96%), Postives = 193/277 (69.68%), Query Frame = 1
Query: 34 QMHLDGAAVKDCDHWHDDAGIVTHHVGFTLLFEQALQVVDPSVSIPYWEYTIEAAL---GLANYGESQVFNPDWFGDASPDNSLHTVTDGRAISLSMLALQ-------------------------------EAWDNVHNPYGLLRAPWNTDATPFVTRYDKINGVDSTDMVTCEEFQSCFESSSIAAMNNCLNAGIHGPVHNTLGGEWNNPEEEFTFQLGYSASVAILAKALWRQGYLRVPNVCLQGRDGPGNASTCITSCPAQVYESLGMTPYDV 762
+MHLDGA V DCDHWHDDAGI+THHVG+T+LFEQALQVVDP+V+IPYWEYTIE GL +YGESQ+F+PDWFGDASP+N++HTV +GR L ++ +AWD VHNPYGLLR PWNTD TP+VTR++ N D T +VTC +Q+CF+ +++A + NCLN G HGPVH +GGEWNNPEEE T LGY+ V ++AK LWR+GYLR+P C G G+ STC SCP+++YE+LGMTPYDV
Sbjct: 144 KMHLDGAGVSDCDHWHDDAGIMTHHVGYTMLFEQALQVVDPAVTIPYWEYTIECGCHSQGLTDYGESQIFDPDWFGDASPNNAMHTVDNGRWAYLPVMQASPAIAVLHCTLTGLIIYIHPTVDTIYRVAQDGDAWDYVHNPYGLLRTPWNTDPTPYVTRHNMTNAQDITSVVTCGMYQNCFDETTLAGLFNCLNGGTHGPVHIKMGGEWNNPEEELTNSLGYADEVPLMAKFLWRKGYLRIPTSCTVEEHGTGDDSTCRASCPSEIYENLGMTPYDV 420
BLAST of mRNA_Ecto-sp13_S_contig13785.2969.1 vs. uniprot
Match: D7G0J8_ECTSI (Putative scytonemin-related tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J8_ECTSI) HSP 1 Score: 333 bits (854), Expect = 7.270e-107 Identity = 153/250 (61.20%), Postives = 192/250 (76.80%), Query Frame = 1
Query: 13 QGIEFFVQMHLDGAAVKDCDHWHDDAGIVTHHVGFTLLFEQALQVVDPSVSIPYWEYTIEAALGLANYGESQVFNPDWFGDASPDNSLHTVTDGRAISLSMLALQEAWDNVHNPYGLLRAPWNTDATPFVTRYDKINGVDSTDMVTCEEFQSCFESSSIAAMNNCLNAGIHGPVHNTLGGEWNNPEEEFTFQLGYSASVAILAKALWRQGYLRVPNVCLQGRDGPGNASTCITSCPAQVYESLGMTPYDV 762
+GI++FVQMHLDGA VKDCDHWHDDAGI+THHVG+TL FEQA+Q+V+PSVSIPYWEYTIEA GL +YGES VFN DWFG+ SP N LHTVT GR L + +AWD+VHNPYGLLR+PWN + TPFVTR++ + + +T MV+C + SCF+S+++A MN+CLN HGPVH GGEW+ EE+F ++GY SV ++ K LWR+GYL +P+ C QG + C TSCPA++YES GMTPYDV
Sbjct: 226 KGIDYFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQAMQLVNPSVSIPYWEYTIEATEGLPSYGESTVFNDDWFGEFSPRNELHTVTKGRWAFLPIQP--DAWDSVHNPYGLLRSPWNLNPTPFVTRHNATSSMSATAMVSCSVYLSCFDSTTLADMNSCLNGETHGPVHILAGGEWHAAEEDFIQKVGYYESVPLVTKFLWRKGYLSIPDTCDQG-------TPCQTSCPAKLYESKGMTPYDV 466
BLAST of mRNA_Ecto-sp13_S_contig13785.2969.1 vs. uniprot
Match: A0A6H5LKB4_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LKB4_9PHAE) HSP 1 Score: 325 bits (833), Expect = 2.710e-104 Identity = 148/250 (59.20%), Postives = 190/250 (76.00%), Query Frame = 1
Query: 13 QGIEFFVQMHLDGAAVKDCDHWHDDAGIVTHHVGFTLLFEQALQVVDPSVSIPYWEYTIEAALGLANYGESQVFNPDWFGDASPDNSLHTVTDGRAISLSMLALQEAWDNVHNPYGLLRAPWNTDATPFVTRYDKINGVDSTDMVTCEEFQSCFESSSIAAMNNCLNAGIHGPVHNTLGGEWNNPEEEFTFQLGYSASVAILAKALWRQGYLRVPNVCLQGRDGPGNASTCITSCPAQVYESLGMTPYDV 762
+GI++FVQ+HLDGA VKDCDHWHDDAGI+THHVGFTL FEQA+Q+VDPSV+IPYWEY+IEA L +YG+S VF+ DWFG+ SP+N HT+T GR L + ++AWD+VHNPYGLLR+PWN D TPFVTR++ + + +TDMV+C + SCF SSS++ MN CLN HGPVH GGEW+ EE+F ++GY SV ++ K LWR+GYL +P+ C G +C TSCP+++YES GMTPYDV
Sbjct: 226 KGIDYFVQLHLDGAGVKDCDHWHDDAGIMTHHVGFTLQFEQAMQLVDPSVTIPYWEYSIEATDDLDSYGDSIVFDHDWFGEFSPNNDFHTMTKGRWAFLRVQ--RDAWDSVHNPYGLLRSPWNVDDTPFVTRHNTTSSMTATDMVSCSVYSSCFASSSLSIMNACLNGETHGPVHILTGGEWHAAEEDFIQKVGYYESVPLVTKFLWRKGYLSIPDKCEVGE-------SCQTSCPSELYESKGMTPYDV 466
BLAST of mRNA_Ecto-sp13_S_contig13785.2969.1 vs. uniprot
Match: A0A7S2CGQ1_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CGQ1_9STRA) HSP 1 Score: 226 bits (577), Expect = 2.100e-66 Identity = 111/251 (44.22%), Postives = 154/251 (61.35%), Query Frame = 1
Query: 19 IEFFVQMHLDGAAVKDCDHWHDDAGIVTHHVGFTLLFEQALQVVDPSVSIPYWEYTIEAALGL-ANYGESQVFNPDWFGDASPDNSLHTVTDGRAISLSMLALQEAWDNVHNPYGLLRAPWNTDATPFVTRYDKINGVDS-TDMVTCEEFQSCFESSSIAAMNNCLNAGIHGPVHNTLGGEWNNPEEEFTF-QLGYSASVAILAKALWRQGYLRVPNVCLQGRDGPGNASTCITSCPAQVYESLGMTPYDV 762
I +FV+ HL GAA DCDHWHD+AGI+THH+ FTL EQ LQ VDP++S+PYWEYT ++ L ++ S+VF +WFG ASP ++ H VT+GR +++ + N+ N YGLLR+PWNT+ T + TRYDK+ G + + TC +F C + SIA +N CLN HGPVH +GG+W + + G + +LAK LWR GY++ P+ C ++S C SCPA L TPY +
Sbjct: 213 IHYFVKKHLHGAAALDCDHWHDNAGIMTHHLAFTLELEQTLQAVDPAISVPYWEYTKDSILHADGDWESSEVFLDEWFGVASPTSNDHVVTEGRWAYAPIMSDASDYSNITNSYGLLRSPWNTNPTAYFTRYDKVLGNEFYNNFPTCTQFSECIKRPSIAQINECLNGETHGPVHIMIGGQWGSVSSAVAMKEYGLAPQHLLLAKNLWRHGYVKCPDSC------DDSSSECKCSCPAS---QLDTTPYKI 454
BLAST of mRNA_Ecto-sp13_S_contig13785.2969.1 vs. uniprot
Match: A0A7S2MH92_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MH92_9STRA) HSP 1 Score: 223 bits (569), Expect = 5.910e-65 Identity = 115/273 (42.12%), Postives = 163/273 (59.71%), Query Frame = 1
Query: 13 QGIEFFVQMHLDGAAVKDCDHWHDDAGIVTHHVGFTLLFEQALQVVDPSVSIPYWEYTIEAAL------GLANYGE-----SQVFNPDWFGDASPDNSLHTVTDGRAISLSMLALQEAWDNVHNPYGLLRAPWNTDAT-PFVTRYDKINGVDSTDMVTCEEFQSCFESSSIAAMNNCLNAGIHGPVHNTLGGEW-------NNPEEEFTFQLGYSASVA----ILAKALWRQGYLRVPNVCLQGRDGPGNASTCITSCPAQVYESLGMTPYDV 762
+GIE+F++ HL G A + CDHWHDDAGI+THHVGFT+ FE+ LQVVDP+V++PYW+YTI++ + E S +F DWFG SPD H V G ++++ A + ++ NPYGLLR+PWNTD+T + R +++G D+ MV+C ++Q CFES ++A MN CLN +HGP+H LGG+W NN G A++A + +K LWR GYLR P C ++ C+ SCP + G +PYD+
Sbjct: 224 RGIEYFIREHLHGGADRACDHWHDDAGIMTHHVGFTMEFEKVLQVVDPTVTVPYWDYTIDSYRYCNPDSSFTCWREEILQKSPLFWDDWFGAGSPDTVDHAVHQGLWGNVTVFAAAGNYSSITNPYGLLRSPWNTDSTLNALRRSSQVDGFDAMGMVSCSDWQRCFESKNLATMNTCLNGEVHGPIHILLGGQWHTNLPILNNSAIWSGVGDGEGANLAGEQLLFSKLLWRSGYLRCPESC----SADTSSEDCVCSCPTEYRH--GRSPYDI 490
BLAST of mRNA_Ecto-sp13_S_contig13785.2969.1 vs. uniprot
Match: A0A7S3Y4W0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4W0_HETAK) HSP 1 Score: 219 bits (557), Expect = 6.910e-65 Identity = 110/261 (42.15%), Postives = 144/261 (55.17%), Query Frame = 1
Query: 13 QGIEFFVQMHLDGAAVKDCDHWHDDAGIVTHHVGFTLLFEQALQVVDPSVSIPYWEYTIEAALGLANYGESQVFNPDWFGDASPDNSLHTVTDGRAISLSMLALQEAWDNVHNPYGLLRAPWNTDATPFVTRYDKINGVDSTDMVTCEEFQSCFESSSIAAMNNCLNAGIHGPVHNTLGGEWNNPEE--EFTFQLGYS---------ASVAILAKALWRQGYLRVPNVCLQGRDGPGNASTCITSCPAQVYESLGMTPYDV 762
+ I F HLDGA +CDHWHDDAG+ HH GFT+ FE+ +Q++DP VS+PYWEYT++A L S +F DWFG SP N H V GR L + + +V N YGLLRAPWNTD+TP++TRY +N C FQ + +++ +N LN HGPVH +GG+W + + +GY+ AS ++ K LWR GY R P C G C S P ++YE LGMTPYDV
Sbjct: 213 RSIGSFQVQHLDGAGRMECDHWHDDAGLAAHHFGFTIQFEEVMQLIDPLVSLPYWEYTLDAE-NLDELEHSPIFRDDWFGKMSPTNEKHIVDTGRWKFLEIGYSADFDFDVQNAYGLLRAPWNTDSTPYLTRYKYVNQGSVFSTPGCSIFQQVMQKATMREINALLNGATHGPVHIEIGGQWGLSDYYIDLLSSMGYAGIADEAKPVASQVLIFKVLWRMGYARCPTTCSSAEAKTGE---CSCSAPRELYEDLGMTPYDV 469 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13785.2969.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13785.2969.1 >prot_Ecto-sp13_S_contig13785.2969.1 ID=prot_Ecto-sp13_S_contig13785.2969.1|Name=mRNA_Ecto-sp13_S_contig13785.2969.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=254bp MCASQGIEFFVQMHLDGAAVKDCDHWHDDAGIVTHHVGFTLLFEQALQVVback to top mRNA from alignment at Ecto-sp13_S_contig13785:1..4201- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13785.2969.1 ID=mRNA_Ecto-sp13_S_contig13785.2969.1|Name=mRNA_Ecto-sp13_S_contig13785.2969.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4201bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13785:1..4201- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13785:1..4201- >mRNA_Ecto-sp13_S_contig13785.2969.1 ID=mRNA_Ecto-sp13_S_contig13785.2969.1|Name=mRNA_Ecto-sp13_S_contig13785.2969.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=762bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13785:1..4201- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |