mRNA_Ecto-sp13_S_contig1378.2968.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1378.2968.1 vs. uniprot
Match: D8LCS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS7_ECTSI) HSP 1 Score: 1543 bits (3995), Expect = 0.000e+0 Identity = 825/1052 (78.42%), Postives = 890/1052 (84.60%), Query Frame = 3
Query: 666 LWDHTRSVQDIEQGAAHRASGGPIPSELRRLLDTFDRAGGALADNPWVQPPECIVAKGMESIRCYFEDLYAEPCRVQRSSVKILLLGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVEPMELKGSSVRVYDCAGQIGYTGLLQMFLTPRSVCVLVCNAEAFGRQRGSESCGQVQEDCRKLEELGVCHWLRSISRRVPNNAVILVATKCDLARGNTGHIGTRMEHACRTWLSSWVRDGMQPVRLEHGVCLTSCYPAAVSEHGESSTGNRCASGGWSCDWRDYRDDHPSPSLLHRLVNKPDGGGPRGAHMVLPRSWDMALTVLEALELGRDPVEMVVHKLAGPGREYVTETAEDKTDVYQGITVEDLEATWQATVEGLAKGGIAVRNTENALKGALSIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEETFDGFVNLGGTGDTRITLEDPSDIASWWRLKNEGVLEPRLADAMWRDGLSEYVLPTLMSLDLTFPLANDPAGGLVVLLRQKLDRPERVGKVIDTFCLDQTPAFNANWTVFLGVPPGAIEKVLTRCCSLGGVQIFWRYGVLVHGGLGDQDGHGMFAAVLEYSSADNVLTAQIFGDISFSAAWVALSYVMSAVSLMLLEFPGLRWKGSLKCPQHGDTMHLTKKATRAGNKFLEGSRCQQCSADTRGLGAAAIDLVRMVDIRLNRDVIFREVKERFVDLKGQYSFASPAGSFKEEALLIQKIDEVAITVRGGFDDTKAGFGQVKGEIERGVHLTKTALVDVQDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLENTQESLIRLKNLQTPNYLYPRLVAVEETGANGTSSGTRGKKSVLNKLRGVVKKDMTLHFLCPVDMTKVPCGYRGEGYRFRETRGWVKKMSPVLQVALVMAKVALKATSGLDVDLSDFLEDVKGGLVGELVDRTLDEDALLRVISGEEDVDADMQEDTRASYEAMKKFMDKEQLDRLKNARDGDGYVDFREKMKRVADGMGGEVWVRNENVQQWTDSHANASLS 3821
LWDHT + +D+ Q A R SGG IPSELRRLL+T D A L NPW +PPE IV KGMESIR YFEDLYAEPCRVQR SVK++L+GQEGAGKTSLRQSMKANEATPTGEWKEESTVFADV+PMEL+GSSVRVYDCAGQ+GYTGLLQMFLTPRSVCVLVCN EAF ++ GSE+ GQVQEDCRKLEEL VCHWLRSISRRVP + VILVATKCDLA GN G +G R+ HACR WLS+WVR+GMQPVRLEHGVCLTSC PAAVSEHGESS GN A GGW CDWRD+RDD SPSLLHRLVNK DGGG RGA MVLPRSWDMALTVLEALELGRDPVEMV+ LAG RE +T+TAE TDVYQGI VEDL A WQATV+GLAKGGIAV N +NAL+GALSIR I KPLLNHKDEET++GFVNLG TGD +ITLEDP DIASWWR KNEGVLEPRLA MW DGLSEYVLPTL SL LTFPL NDP GGLVVLLR K DRPERVGKVI TFCLDQTPAFNA W +FLGVPPGAIEKVLTRCCSLGGVQIFWR GVLVHGGLGD+DG+G+FAAVLEYSSA+N LTAQIFGD SFSAAWVALSYVMSAVSLMLL+FPGLRW+GSLKCPQHGDT+ LT K TRAG+KFL GSRCQQCSADTR LGAAAIDLVRMV++RL+RDVIFREVKERFV+L+GQY F SP GS KEE LLI+KI+EV I V GGF +TKAG G+VKGEIER XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TQESL+RLKNLQ PNYLYP LVAVEETGA+GT SG RG KS+L+K+RGV KDMTLHFLCPVDMTKVPCGY G+GYRFRETRGWVKK+SPVLQVALV AKVALKATSGLDVDLSDFL+DVK GLVGELVD TLDEDALLR++SGEEDV ADM++DTRASYEA+KKFMDKEQ+DRLKNARDGDGYVDFR+KMKRVADG GG VW+RNENVQQWTDS +NA+LS
Sbjct: 516 LWDHTCNAEDVGQERAKRMSGGTIPSELRRLLETLDGADTDLGGNPWAEPPESIVTKGMESIRGYFEDLYAEPCRVQRRSVKVVLVGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVQPMELEGSSVRVYDCAGQVGYTGLLQMFLTPRSVCVLVCNVEAFEQRLGSEANGQVQEDCRKLEELRVCHWLRSISRRVPYSDVILVATKCDLACGNAGDMGKRLAHACRLWLSNWVRNGMQPVRLEHGVCLTSCCPAAVSEHGESSPGNHYAKGGWGCDWRDHRDDSSSPSLLHRLVNKLDGGGLRGAQMVLPRSWDMALTVLEALELGRDPVEMVLQTLAGADRENLTDTAEANTDVYQGIAVEDLNAKWQATVDGLAKGGIAVTNADNALEGALSIR----------------------IPKPLLNHKDEETYEGFVNLGDTGDKQITLEDPLDIASWWRHKNEGVLEPRLAYCMWPDGLSEYVLPTLASLGLTFPLENDPTGGLVVLLRLKPDRPERVGKVIYTFCLDQTPAFNATWKIFLGVPPGAIEKVLTRCCSLGGVQIFWRNGVLVHGGLGDEDGYGIFAAVLEYSSAENGLTAQIFGDTSFSAAWVALSYVMSAVSLMLLDFPGLRWRGSLKCPQHGDTILLTNKVTRAGDKFLAGSRCQQCSADTRALGAAAIDLVRMVNVRLDRDVIFREVKERFVELEGQYVFPSPVGSSKEEDLLIRKINEVTIAVNGGFAETKAGLGEVKGEIERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------TTQESLMRLKNLQAPNYLYPGLVAVEETGADGTPSGARGMKSMLHKVRGV-GKDMTLHFLCPVDMTKVPCGYGGKGYRFRETRGWVKKISPVLQVALVTAKVALKATSGLDVDLSDFLKDVKDGLVGELVDPTLDEDALLRIVSGEEDVGADMRKDTRASYEALKKFMDKEQMDRLKNARDGDGYVDFRDKMKRVADGRGGMVWIRNENVQQWTDSRSNAALS 1526
BLAST of mRNA_Ecto-sp13_S_contig1378.2968.1 vs. uniprot
Match: D7FUC3_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC3_ECTSI) HSP 1 Score: 1445 bits (3741), Expect = 0.000e+0 Identity = 780/1065 (73.24%), Postives = 860/1065 (80.75%), Query Frame = 3
Query: 663 ALWDHTRSVQDI--EQGAAHRASGGPIPSELRRLLDTFDRAGG---ALADNPWVQPPECIVAKGMESIRCYFEDLYAEPCRVQRSSVKILLLGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVEPMELKGSSVRVYDCAGQIGYTGLLQMFLTPRSVCVLVCNAEAFGRQRGSESCGQVQEDCRKLEELGVCHWLRSISRRVPNNAVILVATKCDLARGNTGHIGTRMEHACRTWLSSWVRDGMQPVRLEHGVCLTSCYPAAVSEHGESSTGNRCASGGWSCDWRDYRDDHPSPSLLHRLVNKPDGGGPRGAHMVLPRSWDMALTVLEALELGRDPVEMVVHKLAGPGREYVTETAEDKTDVYQGITVEDLEATWQATVEGLAKGGIAVRNTENALKGALSIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEETFDGFVNLGGTGDTRITLEDPSDIASWWRLKNEGVLEPRLADAMWRDGLSEYVLPTLMSLDLTFPLANDPAGGLVVLLRQKLDRPERVGKVIDTFCLDQTPAFNANWTVFLGVPPGAIEKVLTRCCSLGGVQIFWRYGVLVHGGLGDQDGHGMFAAVLEYSSADNVLTAQIFGDISFSAAWVALSYVMSAVSLMLLEFPGLRWKGSLKCPQHGDTMHLTKKATRAGNKFLEGSRCQQCSADTRGLGAAAIDLVRMVDIRLNRDVIFREVKERFVDLKGQYSFASPAGSFKEEALLIQKIDEVAITVRGGFDDTK-------AGFGQVKGEIERGVHLTKTALVDVQDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLENTQESLIRLKNLQTPNYLYPRLVAVEETGANGTSSGTRGKKSVLNKLRGVVKKDMTLHFLCPVDMTKVPCGYRGEGYRFRETRGWVKKMSPVLQVALVMAKVALKATSGLDVDLSDFLEDVKGGLVGELVDRTLDEDALLRVISGEEDVDADMQEDTRASYEAMKKFMDKEQLDRLKNARDGDGYVDFREKMKRVADGMGGEVWVRNENVQQWTDSHANASLS 3821
ALWDHT +QDI E+GA H SGG IPS+L RLLD DRA G +L DNPW +PPE IVAKG +SIR YFEDLYAEPCRV+RSSVK++L+GQEGAGKTSLRQSMK NEATPTG+WKEESTVFADVEPMEL+GSSVRVYDCAGQ YTGLLQMFLTPRSVCVLVCNAEAFG+QR +++ GQ+ EDCRKLEEL VC WLRSI+RRVP+N ILVATKCDL GN +G RME ACR WL+SWVR+GMQPVRLEHGV LTSC P EHGE T N GGW CDWR + D +P LLHRLVNKPDGGG RG +VLPRSWD+ALTVLEALE GRDPVE+V+HKL GR E YQGITVEDL A W TV+ LA+ I V + +NAL+GALSIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEE+FDG VNLG TGDTR+TLEDP DI SW+RLKNEGV+EPRLA A+W DGLSE+VLPTL SL LTFPL NDPA GLVVLLRQK D PE VGKVIDTFC + PAF+A+W +FLGVPPGAIEKVLTRCC+LGGV+ FWR V VHGG G Q GH MFA VLEYSSA+N LTA+IFGDIS W+ALSYVMSAVSLM+ +FPGLR +GSLKCPQHGD M L K R G+KFLEGSRC QCSADTRGLGAAAIDLVRMVDIRL+RD IF EVKERFVDL+G+YSF+SPAGS K E LLIQKID VAI V GGF++ K AG G VKG I G H XXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +NTQE L+RLKNLQ PNYLYPRLVAVEE + T S G K VL+KLRGV KK+M LHFLCPVDMTKVPCGY GEGYRFRETRGWVKK+SPVLQVA+V AKVAL AT+GL+V++S+FL+DVK GL ELVDR+LDEDALLRV+SGEEDVDADMQ DTRASYEA+KK MDKEQ+ RLKNARDGDGY+DFR+KMKRV DG GG VWVRNENVQ+W DSH+N + S
Sbjct: 181 ALWDHTHYLQDIVHEEGA-HGMSGGRIPSQLCRLLDVLDRAEGGVLSLEDNPWAEPPESIVAKGPKSIRGYFEDLYAEPCRVERSSVKVILVGQEGAGKTSLRQSMKTNEATPTGDWKEESTVFADVEPMELEGSSVRVYDCAGQAAYTGLLQMFLTPRSVCVLVCNAEAFGQQRANDTGGQIMEDCRKLEELRVCEWLRSIARRVPDNDAILVATKCDLVGGNAAEVGRRMEQACRMWLASWVRNGMQPVRLEHGVGLTSCRPTRFGEHGERGTANHTVEGGWVCDWRGHIGDDSAPGLLHRLVNKPDGGGLRGTQLVLPRSWDIALTVLEALESGRDPVEVVMHKLGNVGRGDAAEMTAANAGGYQGITVEDLIAKWLETVDELARREITVTSAKNALEGALSIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEESFDGLVNLGDTGDTRVTLEDPLDIVSWFRLKNEGVIEPRLACALWPDGLSEHVLPTLASLGLTFPLENDPAEGLVVLLRQKPDCPESVGKVIDTFCSEHIPAFSASWKIFLGVPPGAIEKVLTRCCNLGGVRTFWRSAVFVHGGHGYQGGHEMFAVVLEYSSANNELTAKIFGDISTPTPWMALSYVMSAVSLMMRDFPGLRSRGSLKCPQHGDAMLLATKVPRPGDKFLEGSRCPQCSADTRGLGAAAIDLVRMVDIRLDRDEIFHEVKERFVDLEGRYSFSSPAGSSKGENLLIQKIDGVAIAVHGGFNEMKGEANGIRAGLGDVKGXIRGGFHEMXXXXXXXXXXXXXXXEDTKAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGRLENVFKNTQEILMRLKNLQAPNYLYPRLVAVEEVASGSTPSRAHGMKRVLSKLRGVGKKEMVLHFLCPVDMTKVPCGYGGEGYRFRETRGWVKKISPVLQVAVVTAKVALNATAGLNVNISEFLKDVKDGLADELVDRSLDEDALLRVVSGEEDVDADMQNDTRASYEALKKLMDKEQVGRLKNARDGDGYIDFRDKMKRVPDGRGGMVWVRNENVQRWLDSHSNTAPS 1244
BLAST of mRNA_Ecto-sp13_S_contig1378.2968.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI) HSP 1 Score: 1400 bits (3624), Expect = 0.000e+0 Identity = 723/1059 (68.27%), Postives = 813/1059 (76.77%), Query Frame = 3
Query: 663 ALWDHTRSVQDIE-QGAAHRASGGPIPSELRRLLDTFDRAGGA----LADNPWVQPPECIVAKGMESIRCYFEDLYAEPCRVQRSSVKILLLGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVEPMELKGSSVRVYDCAGQIGYTGLLQMFLTPRSVCVLVCNAEAFGRQRGS-ESCGQVQEDCRKLEELGVCHWLRSISRRVPNNAVILVATKCDLARGNTGHIGTRMEHACRTWLSSWVRDGMQPVRLEHGVCLTSCYPAAVSEHGESSTGNRCASGGWSCDWRDYRDDHPSPSLLHRLVNKPDGGGPRGAHMVLPRSWDMALTVLEALELGRDPVEMVVHKLAGPGREYVTETAEDKTDVYQGITVEDLEATWQATVEGLAKGGIAVRNTENALKGALSIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEETFDGFVNLGGTGDTRITLEDPSDIASWWRLKNEGVLEPRLADAMWRDGLSEYVLPTLMSLDLTFPLANDPAGGLVVLLRQKLDRPERVGKVIDTFCLDQTPAFNANWTVFLGVPPGAIEKVLTRCCSLGGVQIFWRYGVLVHGGLGDQDGHGMFAAVLEYSSADNVLTAQIFGDISFSAAWVALSYVMSAVSLMLLEFPGLRWKGSLKCPQHGDTMHLTKKATRAGNKFLEGSRCQQCSADTRGLGAAAIDLVRMVDIRLNRDVIFREVKERFVDLKGQYSFASPAGSFKEEALLIQKIDEVAITVRGGFDDTKAGFGQVKGEIERGVHLTKTALVDVQDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLENTQESLIRLKNLQTPNYLYPRLVAVEETGANGTSSGTRGKKSVLNKLRGVVKKDMTLHFLCPVDMTKVPCGYRGEGYRFRETRGWVKKMSPVLQVALVMAKVALKATSGLDVDLSDFLEDVKGGLVGELVDRTLDEDALLRVISGEEDVDADMQEDTRASYEAMKKFMDKEQLDRLKNARDGDGYVDFREKMKRVADGMGGEVWVRNENVQQWTDSHANASLS 3821
ALW+HT +V+D + A+H GG P +L RLLD DRA L DNPW +PPE IVAKG ++IR YFEDLYAEPCRVQRSSVKI+L+GQEGAGKTSLR+SMKA EATPTGEWKEESTVFADVE MEL+GSS+RVYDCAGQ+ YTGLLQMFLTPR+VCV+VCNAE+FG+QRG+ E+ GQV+EDCRKLEEL VC WLRSISRRVP+N VILVATKCD GN G IG R+E A R WL+SWVR GMQPVRLE GVCLTSC V E GE ST N+ GGW+CDWRD +DD+PSPSLLHRLVNKPDGGG RGA MV+PRSWD+ALTVLEALE GRDPVEMVV L T TA KT +Y GIT EDL WQ GLA I V N +NAL+GAL+IREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEETFDG VNLG TGDTR+TLEDPSDIASW RLKNEGVLEPRLA +W +GLSEYV+PT+ SL LTFPL NDPAGGLVVLLR + DRPE VGKVIDTFCLDQTPA A+W +FLGVP GAIEKVLTRCCSLGGVQ FWR GVLVHGG+G+QD G+FA VLEYS +DN LTAQIFGDIS A WVALSYV+SAVSLMLL+FPGLR +GSLKCPQHGD M L TR G+K LEGSRC+QCS DTRGLGAAAIDLVRMVDIRL+RDVIFREVK RFVDL+GQYSF+S S +E +L+QK++EVA T++ GFDD K +V L++TQESL+RL+ LQ PNY YPRLVA+EE + GT + RG K VL+KLRGV K+MTLHFLCPVDMTKVPCGY G+GYRFRETR WVKK+SPVLQVA+V AKVA+KATSGLDVDLSDFL+DV GLV ELVDR LDED L RV+SGEEDV DMQ+ TRASYEA+ + M K L+R K+ARDGDGYVDFRE M+R++DG GGEVWVRNENVQ+W DSH++A+ S
Sbjct: 251 ALWNHTLNVEDARHEEASHSMQGGSFPRQLCRLLDVLDRAEREVDLNLDDNPWAEPPESIVAKGAKNIRGYFEDLYAEPCRVQRSSVKIILVGQEGAGKTSLRKSMKAKEATPTGEWKEESTVFADVERMELEGSSIRVYDCAGQVAYTGLLQMFLTPRAVCVIVCNAESFGQQRGTCETGGQVKEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDSVGGNAGEIGKRIELASRMWLASWVRSGMQPVRLEPGVCLTSCCTTNVCEDGERSTRNQAMEGGWTCDWRDGKDDNPSPSLLHRLVNKPDGGGLRGAQMVIPRSWDIALTVLEALERGRDPVEMVVEDLGDADGGDATGTAACKTGLYHGITAEDLRTKWQEAAVGLAGRDITVTNADNALEGALAIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDTRVTLEDPSDIASWGRLKNEGVLEPRLARKLWPNGLSEYVIPTIASLGLTFPLENDPAGGLVVLLRLEHDRPELVGKVIDTFCLDQTPALRASWKIFLGVPAGAIEKVLTRCCSLGGVQTFWRSGVLVHGGVGEQDRSGIFAVVLEYSPSDNELTAQIFGDISTPAPWVALSYVVSAVSLMLLDFPGLRSRGSLKCPQHGDAMPLANMVTRTGDKILEGSRCRQCSPDTRGLGAAAIDLVRMVDIRLDRDVIFREVKARFVDLEGQYSFSSSTASSNDEGVLVQKMEEVARTLKDGFDDLKGRLSKV------------------------------------------------------------------------LDSTQESLMRLQTLQAPNYPYPRLVAIEEIASGGTLTRARGMKRVLSKLRGVGTKEMTLHFLCPVDMTKVPCGYDGDGYRFRETRRWVKKLSPVLQVAMVTAKVAIKATSGLDVDLSDFLKDVNDGLVDELVDRMLDEDELRRVVSGEEDVGTDMQKQTRASYEALTELMGK--LERRKDARDGDGYVDFRENMQRLSDGRGGEVWVRNENVQKWLDSHSSAAPS 1235
BLAST of mRNA_Ecto-sp13_S_contig1378.2968.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI) HSP 1 Score: 1400 bits (3624), Expect = 0.000e+0 Identity = 721/1053 (68.47%), Postives = 810/1053 (76.92%), Query Frame = 3
Query: 663 ALWDHTRSVQDIEQGAAHRASGGPIPSELRRLLDTFDRAGGA---LADNPWVQPPECIVAKGMESIRCYFEDLYAEPCRVQRSSVKILLLGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVEPMELKGSSVRVYDCAGQIGYTGLLQMFLTPRSVCVLVCNAEAFGRQRGSESCGQVQEDCRKLEELGVCHWLRSISRRVPNNAVILVATKCDLARGNTGHIGTRMEHACRTWLSSWVRDGMQPVRLEHGVCLTSCYPAAVSEHGESSTGNRCASGGWSCDWRDYRDDHPSPSLLHRLVNKPDGGGPRGAHMVLPRSWDMALTVLEALELGRDPVEMVVHKLAGPGREYVTETAEDKTDVYQGITVEDLEATWQATVEGLAKGGIAVRNTENALKGALSIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEETFDGFVNLGGTGDTRITLEDPSDIASWWRLKNEGVLEPRLADAMWRDGLSEYVLPTLMSLDLTFPLANDPAGGLVVLLRQKLDRPERVGKVIDTFCLDQTPAFNANWTVFLGVPPGAIEKVLTRCCSLGGVQIFWRYGVLVHGGLGDQDGHGMFAAVLEYSSADNVLTAQIFGDISFSAAWVALSYVMSAVSLMLLEFPGLRWKGSLKCPQHGDTMHLTKKATRAGNKFLEGSRCQQCSADTRGLGAAAIDLVRMVDIRLNRDVIFREVKERFVDLKGQYSFASPAGSFKEEALLIQKIDEVAITVRGGFDDTKAGFGQVKGEIERGVHLTKTALVDVQDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLENTQESLIRLKNLQTPNYLYPRLVAVEETGANGTSSGTRGKKSVLNKLRGVVKKDMTLHFLCPVDMTKVPCGYRGEGYRFRETRGWVKKMSPVLQVALVMAKVALKATSGLDVDLSDFLEDVKGGLVGELVDRTLDEDALLRVISGEEDVDADMQEDTRASYEAMKKFMDKEQLDRLKNARDGDGYVDFREKMKRVADGMGGEVWVRNENVQQWTDSHANA 3812
ALWDHT++ Q +E+G +R GG +PS+L RLLD DRA G L DNPW +PP IV+KG SIR YFEDLY E RVQR+SVKI+L+GQEGAGKTSLRQSMKAN A PTGEWKEESTVFADVEPM+L+GS VRVYDCAGQ+ YTGLLQMFLTPRSVCVLVCNAEAFG+QRG ++ GQV+EDCRKLEEL VC WLRS+SRRVPNN VILVATKCDL GN G R+E A RTWL+SWV DGMQPVRLE GVCLTSC +AV E+GE STG+ + GW+CDWRD RDD P P L+HRLVNKPDG G RG MVLPRSWD+ALTVLEALE GRDPVE+VV LA P RE T TA +T VYQGITVE L WQ V GLA+ G+ V N +NAL+GALSIREFDGSLVRHE FVFLDVVWLARILKPLLNHKDEETFDG VNLG TGDTR+TLEDP DIASW RLKN+GVLEPRLA MW +GLS+YVLPTL SL LTFPL NDPAGGLVVLLR DRPERVGKVIDTFCLDQTPAF+ +W +FLGVP GAIEKVLTRCCSLGGVQ FWR GVLVHGGLGD+DGH +FA VLEYSS+DN LTAQIFGDIS A WVALSYV+SAV LMLL+FPGLR +GSLKCPQHGD M L K T+AG K LE S C QCS DTRGLGAAAIDLV MVDIRL+RDVIFR+VK+RFV+L+ QYSF+S A S +E +LIQK++EVA T++ G DD K G+V L++TQESL+RLKNLQ NY YPRLVAVEE + GT S G VLNKLRGV K+M LHFLCPVDMTKVPCGY GEGYRFRE R WVKK+SPVLQVA+V AKVALKATSGLDVDLS+FL+DV+ G V ELVD+TLDED LLRV+ GEED +M+++TRASYEA++ FM K L+R K+ARDGDGYVDFR+ M+R++DG GGEVWVRNENV++W DSH+NA
Sbjct: 155 ALWDHTQNAQHVEEGG-NRTLGGQLPSQLCRLLDVLDRATGGILGLDDNPWAEPPASIVSKGPTSIRGYFEDLYVESSRVQRNSVKIILVGQEGAGKTSLRQSMKANAAIPTGEWKEESTVFADVEPMQLEGSFVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAEAFGQQRGDDTGGQVKEDCRKLEELRVCDWLRSVSRRVPNNDVILVATKCDLVGGNAEEFGRRIEQATRTWLASWVHDGMQPVRLEPGVCLTSCCASAVGENGEKSTGHNASERGWACDWRDDRDDMPPPGLVHRLVNKPDGSGLRGTQMVLPRSWDIALTVLEALERGRDPVEVVVEHLAEPDREDATRTAARQTGVYQGITVEALRVKWQEAVVGLARRGVNVTNAKNALEGALSIREFDGSLVRHEMFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDTRVTLEDPLDIASWGRLKNQGVLEPRLARTMWPNGLSKYVLPTLASLGLTFPLKNDPAGGLVVLLRLNPDRPERVGKVIDTFCLDQTPAFSTSWKIFLGVPAGAIEKVLTRCCSLGGVQTFWRSGVLVHGGLGDEDGHEIFAVVLEYSSSDNELTAQIFGDISTPAPWVALSYVISAVRLMLLDFPGLRSRGSLKCPQHGDAMLLVNKMTQAGVKLLEPSGCPQCSPDTRGLGAAAIDLVSMVDIRLDRDVIFRDVKQRFVELESQYSFSSSAASSNDEDVLIQKMEEVARTLKDGLDDLKGRLGKV------------------------------------------------------------------------LDSTQESLMRLKNLQAANYPYPRLVAVEEIASGGTPSKAHGINRVLNKLRGVGTKEMVLHFLCPVDMTKVPCGYGGEGYRFREARRWVKKLSPVLQVAVVTAKVALKATSGLDVDLSNFLKDVQDGFVDELVDQTLDEDTLLRVVLGEEDAGFNMRKETRASYEALRGFMGK--LERRKDARDGDGYVDFRDNMQRLSDGRGGEVWVRNENVERWLDSHSNA 1132
BLAST of mRNA_Ecto-sp13_S_contig1378.2968.1 vs. uniprot
Match: D7G431_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G431_ECTSI) HSP 1 Score: 1346 bits (3484), Expect = 0.000e+0 Identity = 711/1056 (67.33%), Postives = 812/1056 (76.89%), Query Frame = 3
Query: 663 ALWDHTRSVQDIEQGAAHRA-SGGPIPSELRRLLDTFDRAGGALADNPWVQPPECIVAKGMESIRCYFEDLYAEPCRVQRSSVKILLLGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVEPMELKGSSVRVYDCAGQIGYTGLLQMFLTPRSVCVLVCNAEAFGRQRGSESCGQVQEDCRKLEELGVCHWLRSISRRVPNNAVILVATKCDLARGNTGHIGTRMEHACRTWLSSWVRDGMQPVRLEHGVCLTSCYPAAVSEHGESSTGNRCASGGWSCDWRDYRDDHPSPSLLHRLVNKPDGGGPRGAHMVLPRSWDMALTVLEALELGRDPVEMVVHKLAGPGREYVTETAEDKTDVYQGITVEDLEATWQATVEGLAKGGIAVRNTENALKGALSIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEETFDGFVNLGGTGDTRITLEDPSDIASWWRLKNEGVLEPRLADAMWRDGLSEYVLPTLMSLDLTFPLANDPAGGLVVLLRQKLDRPERVGKVIDTFCLDQTPAFNANWTVFLGVPPGAIEKVLTRCCSLGGVQIFWRYGVLVHGGLGDQDGHGMFAAVLEYSSADNVLTAQIFGDISFSAAWVALSYVMSAVSLMLLEFPGLRWKGSLKCPQHGDTMHLTKKATRAGNKFLEGSRCQQCSADTRGLGAAAIDLVRMVDIRLNRDVIFREVKERFVDLKGQYSFASPAGSFKEEALLIQKIDEVAITVRGGFDDTKAGFGQ-------VKGEIERGVHLTKTALVDVQDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLENTQESLIRLKNLQTPNYLYPRLVAVEETGANGTSSGTRGKKSVLNKLRGVVKKDMTLHFLCPVDMTKVPCGYRGEGYRFRETRGWVKKMSPVLQVALVMAKVALKATSGLDVDLSDFLEDVKGGLVGELVDRTLDEDALLRVISGEEDVDADMQEDTRASYEAMKKFMDKEQLDRLKNARDGDGYVDFREKMKRVADGMGGEVWVRNENVQQWTDSHA 3806
ALWDHT++VQD +Q SGG +P +L RLLD +RA L NPW +PPE IV KG +S+R YFEDLYAEPCR++R S K++L+GQEGAGK+SLRQSMKANE TPTGEWKEESTVFADVEPMEL+GSSVRVYDCAGQ+ YTGLLQMFLTPRSVCVLVCNA AFG+Q ++ G+V+EDCRKLEEL VC WLRSISRRVP+N VILV TKCDLA GN IG R+EHACRTWLSSWVR GMQPV+LE GV TSC+PA +HGE T N + G W+CDW D +DDHP PSLLHRLVNKPDGGG RGA MVLPRSWD L VL++LE GRDPVE+V+ K P R TETA T VYQGITVEDL WQ V+ L + GI V N +NAL+GALSIREFDGSLVRHETFVFLDV+WLARILKPLLNHKD+ETFDG VNLG TGD RITL+DP IASW RLKNEGVLEPRLA AMW GLSEYVLPTL SL LTFPL D G VVLLR K +RP+ VG+VIDTFC TPA +A+W +FLGVPPGAIEKVLTRCC LG VQ FWRYGVLVHGGLGD G G+FA VLEYSS D+ L QIFGDI A WVALSYVMSAVSLML++FPGLRW G+LKCPQHGD M + K T+AG FL+ RC +CS +T+GLGAAAIDL+RMVDIR++R IF EV ERF LKG YSF AGS K++ L + ++ + T++GG DD V+GE+ RG XXXXXXXXXXXXXXXXXXXXX LE+TQESL+RLKNLQ PNYLYPRLV V+E G+ GTSS GKKS+L KLRG+ KKDMTLHFLCPVDMT+VPCGY GEG+RF++TRGWV+K+SPVLQVA+V AKVAL AT+GL+VD SDFL+DV+ GLVGELVDRTLDE AL RV++GEE + ADMQ TRASYEA+KKFMDKE++ R K+A+DGDGYV FR++MKRVADG GG VWVRN+NVQ+W +S A
Sbjct: 62 ALWDHTQNVQDEDQDKGGCGMSGGSMPGQLCRLLDVLERAKIVLDGNPWAEPPESIVDKGRKSMRSYFEDLYAEPCRIERISTKVVLVGQEGAGKSSLRQSMKANEPTPTGEWKEESTVFADVEPMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAAAFGQQLERKNSGEVEEDCRKLEELRVCDWLRSISRRVPHNDVILVVTKCDLAGGNAAEIGERVEHACRTWLSSWVRHGMQPVQLEPGVSFTSCFPAEGGQHGEVGTENHGSKGDWACDWHDMKDDHPPPSLLHRLVNKPDGGGLRGAQMVLPRSWDTVLIVLDSLEQGRDPVEVVLRKSLHPDRGDATETAGGNTVVYQGITVEDLSKKWQKIVDELERRGIIVTNAKNALEGALSIREFDGSLVRHETFVFLDVLWLARILKPLLNHKDQETFDGRVNLGDTGDARITLDDPLYIASWGRLKNEGVLEPRLAYAMWPGGLSEYVLPTLASLGLTFPLEGDLDEGQVVLLRLKPERPDSVGEVIDTFCSRHTPALSASWNIFLGVPPGAIEKVLTRCCGLGAVQTFWRYGVLVHGGLGDLGGRGIFAVVLEYSSTDHKLNGQIFGDIGTPAPWVALSYVMSAVSLMLVDFPGLRWGGALKCPQHGDAMLMANKVTQAGETFLK-RRCPRCSTETKGLGAAAIDLLRMVDIRMDRGEIFDEVMERFDALKGHYSFDGQAGSSKKKDGLTRMVESIIKTMKGGVDDXXXXXXXXXXXXXXVQGEVRRGFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV-----------------------------LESTQESLMRLKNLQAPNYLYPRLVVVKEVGSGGTSSKAHGKKSMLTKLRGLAKKDMTLHFLCPVDMTRVPCGYGGEGHRFKQTRGWVRKISPVLQVAVVTAKVALNATTGLNVDPSDFLKDVRDGLVGELVDRTLDEHALRRVVTGEEAIGADMQRGTRASYEALKKFMDKEEIKRCKDAKDGDGYVHFRDEMKRVADGKGGMVWVRNKNVQKWLESRA 1087
BLAST of mRNA_Ecto-sp13_S_contig1378.2968.1 vs. uniprot
Match: D8LF46_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI) HSP 1 Score: 1334 bits (3453), Expect = 0.000e+0 Identity = 695/1059 (65.63%), Postives = 793/1059 (74.88%), Query Frame = 3
Query: 663 ALWDHTRSVQDIE-QGAAHRASGGPIPSELRRLLDTFDRAGG---ALADNPWVQPPECIVAKGMESIRCYFEDLYAEPCRVQRSSVKILLLGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVEPMELKGSSVRVYDCAGQIGYTGLLQMFLTPRSVCVLVCNAEAFGRQRGSESCGQV-QEDCRKLEELGVCHWLRSISRRVPNNAVILVATKCDLARGNTGHIGTRMEHACRTWLSSWVRDGMQPVRLEHGVCLTSCYPAAVSEHGESSTGNRCASGGWSCDWRDYRDDHPSPSLLHRLVNKPDGGGPRGAHMVLPRSWDMALTVLEALELGRDPVEMVVHKLAGPGREYVTETAEDKTDVYQGITVEDLEATWQATVEGLAKGGIAVRNTENALKGALSIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEETFDGFVNLGGTGDTRITLEDPSDIASWWRLKNEGVLEPRLADAMWRDGLSEYVLPTLMSLDLTFPLANDPAGGLVVLLRQKLDRPERVGKVIDTFCLDQTPAFNANWTVFLGVPPGAIEKVLTRCCSLGGVQIFWRYGVLVHGGLGDQDGHGMFAAVLEYSSADNVLTAQIFGDISFSAAWVALSYVMSAVSLMLLEFPGLRWKGSLKCPQHGDTMHLTKKATRAGNKFLEGSRCQQCSADTRGLGAAAIDLVRMVDIRLNRDVIFREVKERFVDLKGQYSFASPAGSFKEEALLIQKIDEVAITVRGGFDDTKAGFGQVKGEIERGVHLTKTALVDVQDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLENTQESLIRLKNLQTPNYLYPRLVAVEETGANGTSSGTRGKKSVL-NKLRGVVKKDMTLHFLCPVDMTKVPCGYRGEGYRFRETRGWVKKMSPVLQVALVMAKVALKATSGLDVDLSDFLEDVKGGLVGELVDRTLDEDALLRVISGEEDVDADMQEDTRASYEAMKKFMDKEQLDRLKNARDGDGYVDFREKMKRVADGMGGEVWVRNENVQQWTDSHANASLS 3821
ALWDHT+ VQDI+ + SGG +PS+L RLLD D L NPW +PPE +VAKG +SIR YFEDLYAEPCR+ RSSVK++L+GQEGAGKTSLRQSMKAN+A+PTG+W EESTVFA+VEPMEL GSSVRVYDCAGQ+ YTGLLQMFLTPRSVCVLVCNA FG++RGSE CG+V QEDCRKLEEL VC WLRSISRRVP+N VILVATKCDL GN G IG+RME++CRTWLS WVR+GMQPVRLE VCLTSC+P V EHGE S GN GGW+CDWR+ DD PSPS LHRLVNKPDG G RGA MVLPRSWD+AL VLEALE GRDPVE+V+ K P R TET K DVYQGITVE+L WQ TV+ L + GI V N NAL+GALSIREFDGSLVRHE FVFLDVVWL+RILKPLLNHKD+ TFDG V LG TGDTRITL D SDI SW RLK+EGVLEPRLA+AMW GLSEYVLPTL+S+ LTFPL DP GLVVLLR + RPE VG+VIDTFC TPAF+A+W +FLGVPPGAIEKVLTRCC LG VQ FWRYGVLVHGGLGD DG G+FA V+EYSS DN LTAQIFGDIS A WVALSYVMSAVSLML++FPGLRWKG LKCPQHG+ M K RAG+KFLE +C +CS +TRGLGAAAIDLV +VDIRL+RDVIFREVK RFV L+ QY F+ P GS K E L++KI+++AI ++ T +D LE+TQESL+RLKNLQ PNYLYPRLV V++ G G SS G K L +KLRG+ KKDMTLHFLCPVDMT+VPCG GEGYRFRE R WVKK+SPVLQV LV AKVAL A +GL+VD+S FL+DV+ GL+GE+VDRTLDEDALLR +SG+ +D D+Q DTRASYEA+K FM+ E+ R KNARDGDGY+DFR+KMK + DG GGEVW+RNENVQ+W DS+++ + S
Sbjct: 323 ALWDHTQDVQDIDPKERGDSMSGGTMPSQLCRLLDVLDPVPSRYVGLGGNPWTEPPESVVAKGPKSIRGYFEDLYAEPCRITRSSVKVVLVGQEGAGKTSLRQSMKANKASPTGKWNEESTVFANVEPMELDGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGQRRGSEDCGEVEQEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDLVGGNAGEIGSRMENSCRTWLSGWVRNGMQPVRLEPHVCLTSCFPIRVGEHGERSAGNHVWKGGWACDWRNVEDDQPSPSFLHRLVNKPDGRGLRGAQMVLPRSWDVALAVLEALEHGRDPVEVVLRKSPEPDRGDETETG-GKADVYQGITVEELGTKWQETVDELERRGITVTNMMNALEGALSIREFDGSLVRHEKFVFLDVVWLSRILKPLLNHKDQRTFDGRVKLGDTGDTRITLHDQSDIDSWDRLKSEGVLEPRLANAMWPHGLSEYVLPTLVSVGLTFPLEGDPDAGLVVLLRLEPHRPESVGEVIDTFCSKHTPAFSASWEIFLGVPPGAIEKVLTRCCGLGDVQTFWRYGVLVHGGLGDLDGRGIFAVVVEYSSTDNELTAQIFGDISTPAPWVALSYVMSAVSLMLVDFPGLRWKGCLKCPQHGNEMPFANKVNRAGDKFLE-RKCPRCSPETRGLGAAAIDLVCLVDIRLDRDVIFREVKARFVVLESQY-FSCPTGSSKTEDELLRKIEDMAIAMK-----------------------VMTGRLDT-----------------------------------------------------VLESTQESLMRLKNLQAPNYLYPRLVVVKKDGNGGRSSRATGWKRCLPSKLRGMGKKDMTLHFLCPVDMTEVPCGPGGEGYRFREMRDWVKKISPVLQVTLVTAKVALNAVTGLNVDVSGFLKDVQDGLLGEIVDRTLDEDALLRAVSGDGAIDTDLQRDTRASYEALKAFMENEERRRRKNARDGDGYIDFRDKMKLLPDGRGGEVWIRNENVQKWLDSNSSPAPS 1302
BLAST of mRNA_Ecto-sp13_S_contig1378.2968.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI) HSP 1 Score: 1333 bits (3449), Expect = 0.000e+0 Identity = 733/1065 (68.83%), Postives = 833/1065 (78.22%), Query Frame = 3
Query: 663 ALWDHTRSVQDIE-QGAAHRASGGPIPSELRRLLDTFD--RAGG----------ALADNPWVQPPECIVAKGMESIRCYFEDLYAEPCRVQRSSVKILLLGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVEPMELKGSSVRVYDCAGQIGYTGLLQMFLTPRSVCVLVCNAEAFGRQRGSESCGQVQEDCRKLEELGVCHWLRSISRRVPNNAVILVATKCDLARGNTGHIGTRMEHACRTWLSSWVRDGMQPVRLEHGVCLTSCYPAAVSEHGESSTGNRCASGGWSCDWRDYRDDHPSPSLLHRLVNKPDGGGPRGAHMVLPRSWDMALTVLEALELGRDPVEMVVHKLAGPGREYVTETAEDKTDVYQGITVEDLEATWQATVEGLAKGGIAVRNTENALKGALSIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEETFDGFVNLGGTGDTRITLEDPSDIASWWRLKNEGVLEPRLADAMWRDGLSEYVLPTLMSLDLTFPLANDPAGGLVVLLRQKLDRPERVGKVIDTFCLDQTPAFNANWTVFLGVPPGAIEKVLTRCCSLGGVQIFWRYGVLVHGGLGDQDGHGMFAAVLEYSSADNVLTAQIFGDISFSAAWVALSYVMSAVSLMLLEFPGLRWKGSLKCPQHGDTMHLTKKATRAGNKFLEGSRCQQCSADTRGLGAAAIDLVRMVDIRLNRDVIFREVKERFVDLKGQYSFASPAGS-FKEEALLIQKIDEVAITVRGGFDDTKAGFGQVKGEIERGVHLTKTALVDVQDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLENTQESLIRLKNLQTPNYLYPRLVAVEETGANGTSSGTRGKKSVLNKLRGVVKKDMTLHFLCPVDMTKVPCGYRGEGYRFRETRGWVKKMSPVLQVALVMAKVALKATSGLDVDLSDFLEDVKGGLVGELVDRTLDEDALLRVISGEEDVDADMQEDTRASYEAMKKFMDKEQLDRLKNARDGDGYVDFREKMKRVADGMGGEVWVRNENVQQWTDSHANAS 3815
ALWDHT++VQD++ + H GGP+PS+L RLLD FD A G +L++NPW +PPE IVAKG +SIR YFEDLYAE CR++R VK++L+GQEGAGKTSLRQSMKAN+AT TGEWKE STV ADVE MEL+GSSVRVYDCAGQ+ YTGLLQMFLTPRSVCVLVCNA FG Q GS++ QV+EDCRKLE L VC+WLRSISRRVP+ VILVATKCDLA GN IG RME ACR WLSSW M VRLE GVCLTSC+P EHGESS+ N + W+CDWRD PSPSL++RLVNKPD GG RG MVLPRSWD+ALT L++LE GRDPVEMV+ K R TETA KT VYQGITVE+L A WQ TV+GL + GI V N ENAL+GALSIREFDGSLV HE FVFLDVVWLARILKPLLNHKD+E FDG VNLG TGDTRITL+D +DIASW RLK EGVLEPRLA A+W +GLSEYVLPTL SL L FPL NDPA GLVVLLR K RPE VGKVIDTFC TPAF A+W +FLGVPPGAIEKVLTRCC LGGVQ FWRYGVLVHGGLG QD FA V+EYSS DN L AQIFGD+S W A SYVMSAVSLML++FPGL WKG L+CPQHGD M KATR G+KFLEGSRC QCSADT GLGAAAIDL+R VDIRL+RDVIF EVK RF DL+ QYSF P KEE+ LI+KID +A V+G F++ K + +V+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LE+TQESL+RL++LQ PNY YPRLV V+E G++GT+S RG+KS+L+KL GV KKDMTL FLCPVDMT+VPCGY GEGYRF+ETR WVKK+SPVLQVA+V AKVAL AT+GL VD+SDFL+DVK GLV ELVDRTLD++ALLR + G++++ AD+Q DTRASYEA+KKFMDKEQ++R+KN RDGDGY+DFR++MKRV DG GG VWVRNENVQ+W DS + A+
Sbjct: 251 ALWDHTQNVQDVDHKERGHSMPGGPMPSQLCRLLDIFDSVEAQGLNDTGIGPSLSLSENPWAEPPESIVAKGPKSIRGYFEDLYAEHCRIKRRGVKVVLVGQEGAGKTSLRQSMKANKATLTGEWKENSTVLADVESMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGEQLGSDNIDQVEEDCRKLEALRVCNWLRSISRRVPDTEVILVATKCDLAGGNAWEIGRRMEKACRRWLSSWACRNMLSVRLEPGVCLTSCFPVGAGEHGESSSENFLSKSCWACDWRDVGGGEPSPSLIYRLVNKPDKGGLRGVQMVLPRSWDIALTFLDSLEHGRDPVEMVILKSPDSDRG-ATETA--KTTVYQGITVEELSAKWQETVDGLGRRGITVTNAENALEGALSIREFDGSLVPHEKFVFLDVVWLARILKPLLNHKDQEMFDGRVNLGDTGDTRITLDDSADIASWDRLKKEGVLEPRLAYAIWPNGLSEYVLPTLASLGLIFPLENDPAEGLVVLLRLKPHRPESVGKVIDTFCSGLTPAFRASWKIFLGVPPGAIEKVLTRCCGLGGVQTFWRYGVLVHGGLGVQDERRTFAVVVEYSSTDNELIAQIFGDVSTPGPWGATSYVMSAVSLMLVDFPGLGWKGYLECPQHGDGMLFVNKATRDGDKFLEGSRCPQCSADTGGLGAAAIDLLRFVDIRLDRDVIFNEVKARFNDLESQYSFTCPTHDRSKEESELIRKIDGMATAVQGAFNEVKV---EXXXXXXXXXXXXXXXFAEVEGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLGMISGRLDKVLESTQESLMRLRDLQAPNYRYPRLVVVKEVGSDGTASKARGRKSMLSKLCGVGKKDMTLQFLCPVDMTQVPCGYGGEGYRFKETRSWVKKISPVLQVAVVTAKVALNATTGLHVDISDFLKDVKDGLVEELVDRTLDDEALLRAVLGDDNIGADLQRDTRASYEALKKFMDKEQIERVKNTRDGDGYIDFRDEMKRVPDGRGGMVWVRNENVQKWLDSRSIAA 1309
BLAST of mRNA_Ecto-sp13_S_contig1378.2968.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI) HSP 1 Score: 1308 bits (3384), Expect = 0.000e+0 Identity = 687/1057 (65.00%), Postives = 778/1057 (73.60%), Query Frame = 3
Query: 663 ALWDHTRSVQDIE-QGAAHRASGGPIPSELRRLLDTFDRAGG---ALADNPWVQPPECIVAKGMESIRCYFEDLYAEPCRVQRSSVKILLLGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVEPMELKGSSVRVYDCAGQIGYTGLLQMFLTPRSVCVLVCNAEAFGRQRGSESCGQVQEDCRKLEELGVCHWLRSISRRVPNNAVILVATKCDLARGNTGHIGTRMEHACRTWLSSWVRDGMQPVRLEHGVCLTSCYPAAVSEHGESSTGNRCASGGWSCDWRDYRDDHPSPSLLHRLVNKPDGGGPRGAHMVLPRSWDMALTVLEALELGRDPVEMVVHKLAGPGREYVTETAEDKTDVYQGITVEDLEATWQATVEGLAKGGIAVRNTENALKGALSIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEETFDGFVNLGGTGDTRITLEDPSDIASWWRLKNEGVLEPRLADAMWRDGLSEYVLPTLMSLDLTFPLANDPAGGLVVLLRQKLDRPERVGKVIDTFCLDQTPAFNANWTVFLGVPPGAIEKVLTRCCSLGGVQIFWRYGVLVHGGLGDQDGHGMFAAVLEYSSADNVLTAQIFGDISFSAAWVALSYVMSAVSLMLLEFPGLRWKGSLKCPQHGDTMHLTKKATRAGNKFLEGSRCQQCSADTRGLGAAAIDLVRMVDIRLNRDVIFREVKERFVDLKGQYSFASPAGSFKEEALLIQKIDEVAITVRGGFDDTKAGFGQVKGEIERGVHLTKTALVDVQDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLENTQESLIRLKNLQTPNYLYPRLVAVEETGANGTSSGTRGKKSVLNKLRGVVKKDMTLHFLCPVDMTKVPCGYRGEGYRFRETRGWVKKMSPVLQVALVMAKVALKATSGLDVDLSDFLEDVKGGLVGELVDRTLDEDALLRVISGEEDVDADMQEDTRASYEAMKKFMDKEQLDRLKNARDGDGYVDFREKMKRVADGMGGEVWVRNENVQQWTDSHANASLS 3821
ALWDHT++VQD+ + GG +PS+L RLL DR G AL NPW +PPE IVAKG +SIR YFEDLYAEPC ++RSSVK++L+GQEGAGKTSLRQSMKAN+ATPTGEWKEESTVFADVEPMEL+GSSVRVYDCAGQ+ YTGLLQMFLTPRSVCVLVCNA FG+Q GS++ QV+EDCRKL+ L VC WLRSISRRVP N VILVATKCDL GN G R+EHACR WLS+WVR+GM PVRLE V LTSC+P EHGES+TG+ + GW+CDWR D SPSLL+RLVNKPD GG RG MVLPRSWD+ALTVLEALE GRDPVEMV+ K R TET KT+VYQ I VE+L W+ TV+ L K GI V N ENAL+GALSIREFDGSLVRHE FVFLDVVWLARILKPLLNHKD+ TFDG VNLG TGD RITL+D SDIASW RLKNEGVLEPRLA AMW DGLSEYVLPTL SL LTFPL DP GLVVLLR + +RP VG+ IDTFC TPAF+A+W +FLGVPPGAIEKVLTRCC LG VQ FWRYGVLVHGGLGD DG G+FA V EYSS +N LTAQIFGDIS SA WVALSYV SAVSLML++FPGLRW GSLKCPQHG M K AG+KFLE RC +CS TRGLGAAAIDL+RMVDIRL+R VI REVK RF L+ QY F PAGS +E ++K+DEV R L K LE+TQESL RLKNLQ PNY YPRLV V+E G++GTSS GKKS+L+KLRG+ KKDM LHFLCPVDMT VPCGY GEGY+F+ETR WVK++SP LQV +V AKVAL A +GL+VD+SDFL+DVK GLV ELVDRTLDEDALLR +SG++ V AD+Q DTRASYEA+K FM+ E+ R KNARDGDGY++FRE+MKR+ DG GGEVWVRNENV++W S+++ + S
Sbjct: 40 ALWDHTQNVQDVHHKEGGDIMPGGAMPSQLCRLLVVLDRLSGVNLALLGNPWAEPPESIVAKGPKSIRGYFEDLYAEPCWIKRSSVKVVLVGQEGAGKTSLRQSMKANKATPTGEWKEESTVFADVEPMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGQQLGSDNVDQVEEDCRKLQALRVCDWLRSISRRVPGNDVILVATKCDLVSGNAEETGRRLEHACRMWLSTWVRNGMDPVRLEPHVSLTSCFPIGDGEHGESNTGSDASKQGWACDWRHVEGDKSSPSLLYRLVNKPDEGGLRGVQMVLPRSWDIALTVLEALEHGRDPVEMVLLKSPDSERR-PTETGVGKTNVYQAIKVEELGTNWRETVDELGKRGIVVTNAENALEGALSIREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQRTFDGRVNLGDTGDARITLDDSSDIASWGRLKNEGVLEPRLAYAMWPDGLSEYVLPTLASLGLTFPLEGDPDNGLVVLLRLEPNRPASVGEAIDTFCSKYTPAFSASWEIFLGVPPGAIEKVLTRCCGLGDVQTFWRYGVLVHGGLGDLDGRGIFAVVTEYSSTNNELTAQIFGDISTSAPWVALSYVTSAVSLMLMDFPGLRWNGSLKCPQHGYEMPFATKVNCAGDKFLE-RRCPRCSPQTRGLGAAAIDLIRMVDIRLDRGVIDREVKARFDVLESQY-FTCPAGSSTDEDEFVRKMDEVKAEXXXXXXXXXXXXXXXXXXAGR---LDKV-----------------------------------------------------------LESTQESLARLKNLQAPNYHYPRLVVVKEVGSHGTSSKAHGKKSMLSKLRGLGKKDMRLHFLCPVDMTTVPCGYGGEGYQFQETRAWVKRVSPALQVTVVTAKVALNAVTGLNVDISDFLKDVKDGLVEELVDRTLDEDALLRAVSGDDTVGADLQRDTRASYEALKVFMENEERRRRKNARDGDGYIEFREEMKRLPDGRGGEVWVRNENVRKWLASNSSPAPS 1031
BLAST of mRNA_Ecto-sp13_S_contig1378.2968.1 vs. uniprot
Match: A0A6H5K1K4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K4_9PHAE) HSP 1 Score: 1247 bits (3227), Expect = 0.000e+0 Identity = 661/998 (66.23%), Postives = 742/998 (74.35%), Query Frame = 3
Query: 963 MKANEATPTGEWKEESTVFADVEPMELKGSSVRVYDCAGQI----------------------------GYTGLLQMFLTPRSVCVLVCNAEAFGRQRGSESCGQVQEDCRKLEELGVCHWLRSISRRVPNNAVILVATKCDLARGNTGHIGTRMEHACRTWLSSWVRD-------------------GMQPVRLEHGVCLTSCYPAAVSEHGESSTGNRCASGGWSCDWRDYRDDHPSPSLLHRLVNKPDGGGPRGAHMVLPRSWDMALTVLEALELGRDPVEMVVHKLAGPGREYVTETAEDKTDVYQGITVEDLEATWQATVEGLAKGGIAVRNTENALKGALSIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEETFDGFVNLGGTGDTRITLEDPSDIASWWRLKNEGVLEPRLADAMWRDGLSEYVLPTLMSLDLTFPLANDPAGGLVVLLRQKLDRPERVGKVIDTFCLDQTPAFNANWTVFLGVPPGAIEKVLTRCCSLGGVQIFWRYGVLVHGGLGDQDGHGMFAAVLEYSSADNVLTAQIFGDISFSAAWVALSYVMSAVSLMLLEFPGLRWKGSLKCPQHGDTMHLTKKATRAGNKFLEGSRCQQCSADTRGLGAAAIDLVRMVDIRLNRDVIFREVKERFVDLKGQYSFASPAGSFKEEALLIQKIDEVAITVRGGFDDTKAGFGQVKGEIERGVHLTKTALVDVQDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLENTQESLIRLKNLQTPNYLYPRLVAVEETGANGTSSGTRGKKSVLNKLRGVVKKDMTLHFLCPVDMTKVPCGYRGEGYRFRETRGWVKKMSPVLQVALVMAKVALKATSGLDVDLSDFLEDVKGGLVGELVDRTLDEDALLRVISGEEDVDADMQEDTRASYEAMKKFMDKEQLDRLKNARDGDGYVDFREKMKRVADGMGGEVWVRNENVQQWTDSHANAS 3815
MKAN+AT TG+WKEESTV ADVEPMEL+GSSVRVYDCAGQ+ YTGLLQMFLTPRSVCVLVCNA FG++R SE CG V+ DCRKLEEL VC WLRSISRR+P+N VILVATKCDLA GN IG+RME ACRTWLS WVR+ GMQPVRLE VCLTS P V EHG+ S GN + GGW+CDWRD DD P PS LHRLVNKPDG G RG VLPRSWD+ALTVLEALE GRDPVE V+ K P E ETA KTDVYQGITVE+L WQ TV+ L + GI V N +NAL+GALS+REFDGSLVR E FVFLDVVWLARILKPLLNHKD+ETFDG VNLG TGDT ITL+DPSDI SW RLK EGVLEP+LA AMW DGLSEYVLPTL SL LTFPL NDP GLVVLLR K +RPE VGKVIDTFC TPAF+A+W +FLGVPPGA+EKVLTRCC LGGV+ FWRYGVLVHG LG QDG FA VLEYSS DN LTA+IFGDIS AAWVALSYVMSAV LML++FPGLRWKGSLKCPQHGD M A R G+K LEGSRC QCS DT GLGAAAIDLVR VDIRL+RDVIF +VK RF DL QYS + P +EE LI+KID+VA V+GGF + + G +KGE+ XXXXXXXXXXXXX LE+T+ESL+R++NLQ PNY YPRLV V+E GA+GT+S GKKSVL+KLR + KKDMTLHFLCPVDMTKVPCGY GEGYRF+ETRGWVKK+SPVLQVA+V AKVAL AT+GLDVD+S+FL+DVK GLV ELVDRT+DE+ALLR +SG++D+ A++Q DTRASYEA+KKFMDKEQ+DR+KNARDGDGY+DFR++MKRV DG GG VWVRN+NVQ+W DSH+ A+
Sbjct: 1 MKANKATLTGDWKEESTVVADVEPMELQGSSVRVYDCAGQVMPSAIADNPPSGVYGQWGIVSSIDLGEVAYTGLLQMFLTPRSVCVLVCNAGEFGQRRDSEHCGGVEGDCRKLEELRVCDWLRSISRRIPDNDVILVATKCDLAGGNAREIGSRMEKACRTWLSGWVRNAXXXXXXXXXXXXXXXXXXGMQPVRLEPHVCLTSSLPVRVDEHGDRSAGNHGSKGGWACDWRDEEDDQPPPSFLHRLVNKPDGRGLRGTQTVLPRSWDIALTVLEALEHGRDPVEAVLGKSPDPDGEDAAETAGGKTDVYQGITVEELGTKWQETVDELERRGITVTNAKNALEGALSVREFDGSLVRRENFVFLDVVWLARILKPLLNHKDQETFDGRVNLGDTGDTPITLDDPSDITSWDRLKKEGVLEPKLAYAMWPDGLSEYVLPTLASLGLTFPLENDPDEGLVVLLRLKPNRPESVGKVIDTFCSGLTPAFSASWKIFLGVPPGAVEKVLTRCCGLGGVRTFWRYGVLVHGSLGVQDGRRTFAVVLEYSSTDNELTAKIFGDISTPAAWVALSYVMSAVRLMLVDFPGLRWKGSLKCPQHGDAMLFVDMARRGGDKLLEGSRCPQCSVDTGGLGAAAIDLVRFVDIRLDRDVIFNDVKARFDDLDSQYSLSCPTDPSQEEGELIRKIDDVATAVKGGFAEVEGGVSNLKGEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKV------------------------------------LESTKESLMRIRNLQAPNYRYPRLVVVKEVGADGTASKAHGKKSVLSKLRRLGKKDMTLHFLCPVDMTKVPCGYGGEGYRFQETRGWVKKISPVLQVAVVTAKVALNATTGLDVDISNFLKDVKDGLVNELVDRTIDEEALLRAVSGDDDIGAELQRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFRDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAA 962
BLAST of mRNA_Ecto-sp13_S_contig1378.2968.1 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE) HSP 1 Score: 1130 bits (2923), Expect = 0.000e+0 Identity = 609/934 (65.20%), Postives = 683/934 (73.13%), Query Frame = 3
Query: 663 ALWDHTRSVQDI-EQGAAHRASGGPIPSELRRLLDTFDRAGGA------LADNPWVQPPECIVAKGMESIRCYFEDLYAEPCRVQRSSVKILLLGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVEPMELKGSSVRVYDCAGQIGYTGLLQMFLTPRSVCVLVCNAEAFGRQRGSESCGQVQEDCRKLEELGVCHWLRSISRRVPNNAVILVATKCDLARGNTGHIGTRMEHACRTWLSSWVRDGMQPVRLEHGVCLTSCYPAAVSEHGESSTGNRCASGGWSCDWRDYRDDHPSPSLLHRLVNKPDGGGPRGAHMVLPRSWDMALTVLEALELGRDPVEMVVHKLAGPGREYVTETAEDKTDVYQGITVEDLEATWQATVEGLAKGGIAVRNTENALKGALSIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEETFDGFVNLGGTGDTRITLEDPSDIASWWRLKNEGVLEPRLADAMWRDGLSEYVLPTLMSLDLTFPLANDPAGGLVVLLRQKLDRPERVGKVIDTFCLDQTPAFNANWTVFLGVPPGAIEKVLTRCCSLGGVQIFWRYGVLVHGGLGDQD--GHGMFAAVLEYSSADNVLTAQIFGDISFSAAWVALSYVMSAVSLMLLEFPGLRWKGSLKCPQHGDTMHLTKKATRAGNKFLEGSRCQQCSADTRGLGAAAIDLVRMVDIRLNRDVIFREVKERFVDLKGQYSFASPAGSFKEEALLIQKIDEVAITVRGGFDDTKAGFGQVKGEIERGVHLTKTALVDVQDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLENTQESLIRLKNLQTPNYLYPRLVAVEETGANGTSSGTRGKKSVLNKLRGVVKKDMTLHFLCPVDMTKVPCGYRGEGYRFRETRGWVKKMSPVLQV 3437
ALWDHT++ +DI R SGGP+PS+L RLLD D L NPWV+PPE IV KG +++R YFEDLYAEPCR++RS VK++L+GQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVE MEL+GSSVRVYDCAGQ+ YTGLLQMFLTPR+VCVLVCNA FG+Q SES QV EDCRKLEEL VC WLRSISRRVPNN VILVATKCDLA GN G IG RMEHACR WLSSWVR+G+QPVRLE V LTSC+ V EHGESSTG+ GGW+CDWRD D +PSPSLLHRLVNKPDG G RG MVLPRSWD+ALTVLEALE GRDPVE+V+ K P R TETA +T +YQGITVEDL WQ TV+GL + G+ V N +NAL+GAL IREFDGSL+R+E F+FLDVVWLA+ILKPLLNHKD+ETFDG V+LG TGD RITL+DPSDIASW RLK++GVLEPRLA A+W +GLSEYVLP L L LTFPL +DPA GLVVLLR K DRPE VG IDTFCLD TPA +A+W +FLGVPPGAIEKVLTRCC LGGV+ FWRYGVLVHGGLG+ G+FA VLEYSS DN L AQIFGDIS A WV LSYVMSAVSLMLL+FPGLRW+GSL CPQHGDTM L KA+ GLGAAAIDLVRMVDIR +R R V+ G+ K+E LIQKID+VAI ++GGF++ K + + V K XXXXXXXXXXXXXXXX E+T ESL+RL+NL PNY YPRLV V+E G+NGTSS G K L K+RGV KKDMTLHFLCPVDMT VPCGY GEGYR +ETRGWVKK+SPVLQV
Sbjct: 106 ALWDHTQNAEDIGHDEGTQRMSGGPMPSQLCRLLDVLDDIQQGKFQSLKLGTNPWVEPPEPIVVKGPKAVRGYFEDLYAEPCRIKRSIVKVVLVGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVEAMELEGSSVRVYDCAGQVAYTGLLQMFLTPRAVCVLVCNAGKFGQQTRSESNDQVGEDCRKLEELRVCDWLRSISRRVPNNDVILVATKCDLAGGNAGKIGARMEHACRRWLSSWVRNGLQPVRLEPCVSLTSCFETGVGEHGESSTGSHELKGGWACDWRDMADGNPSPSLLHRLVNKPDGRGLRGTQMVLPRSWDIALTVLEALEHGRDPVEVVLRKSPDPDRGDATETARGETAMYQGITVEDLSIKWQETVDGLERSGVTVTNAKNALEGALLIREFDGSLIRYEKFIFLDVVWLAKILKPLLNHKDQETFDGLVSLGDTGDARITLDDPSDIASWGRLKSQGVLEPRLAYAIWPNGLSEYVLPALAFLGLTFPLEDDPAKGLVVLLRLKPDRPESVGHAIDTFCLDHTPALSASWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGEVHVGRRGIFAVVLEYSSTDNELAAQIFGDISTPAPWVVLSYVMSAVSLMLLDFPGLRWRGSLTCPQHGDTMLLANKAS-----------------PVAGLGAAAIDLVRMVDIRRDR----RRVQ----------------GNSKDENKLIQKIDDVAIAMKGGFNEVKXXXXXXXXDAKAAVDELKRXXXXXXXXXXXXXXXXXXXXXXXXNELVVVKRTLDKVA----------------------ESTHESLMRLENLLDPNYRYPRLVVVKEVGSNGTSSNAHGVKRWLGKIRGVGKKDMTLHFLCPVDMTTVPCGYGGEGYRIQETRGWVKKISPVLQV 980 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1378.2968.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1378.2968.1 >prot_Ecto-sp13_S_contig1378.2968.1 ID=prot_Ecto-sp13_S_contig1378.2968.1|Name=mRNA_Ecto-sp13_S_contig1378.2968.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1168bp MTRVVFSCYSPIFVSCTGPIPKELGSLLNLEKLWLAGNKLTGPTPPELGKback to top mRNA from alignment at Ecto-sp13_S_contig1378:1943..16263- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1378.2968.1 ID=mRNA_Ecto-sp13_S_contig1378.2968.1|Name=mRNA_Ecto-sp13_S_contig1378.2968.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=14321bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1378:1943..16263- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1378:1943..16263- >mRNA_Ecto-sp13_S_contig1378.2968.1 ID=mRNA_Ecto-sp13_S_contig1378.2968.1|Name=mRNA_Ecto-sp13_S_contig1378.2968.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3504bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1378:1943..16263- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |