prot_Ecto-sp13_S_contig13776.2967.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13776.2967.1
Unique Nameprot_Ecto-sp13_S_contig13776.2967.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length53
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig13776.2967.1 vs. uniprot
Match: A0A6H5L369_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L369_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 8.530e-22
Identity = 48/52 (92.31%), Postives = 51/52 (98.08%), Query Frame = 0 
Query:    1 GSTLLGSTNAAVVAAQKERHSADAGVQCSRPAQSSDQLMGQVARGGCGCTVM 52
            GSTLLGS NAAVVAAQK+RHSADAGVQCSRPA+SSDQL+GQVARGGCGCTVM
Sbjct: 1594 GSTLLGSANAAVVAAQKKRHSADAGVQCSRPAESSDQLVGQVARGGCGCTVM 1645
[Close]
BLAST of mRNA_Ecto-sp13_S_contig13776.2967.1 vs. uniprot
Match: D8LDX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDX9_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 4.290e-19
Identity = 46/52 (88.46%), Postives = 49/52 (94.23%), Query Frame = 0 
Query:    1 GSTLLGSTNAAVVAAQKERHSADAGVQCSRPAQSSDQLMGQVARGGCGCTVM 52
            GSTLLGSTNAA   AQK+RHSADAGVQCSRPA+SSDQL+GQVARGGCGCTVM
Sbjct:  534 GSTLLGSTNAA---AQKKRHSADAGVQCSRPAESSDQLVGQVARGGCGCTVM 582
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13776.2967.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L369_9PHAE8.530e-2292.31Protein kinase domain-containing protein n=1 Tax=E... [more]
D8LDX9_ECTSI4.290e-1988.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13776contigEcto-sp13_S_contig13776:4130..4288 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13776.2967.1mRNA_Ecto-sp13_S_contig13776.2967.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13776 4130..4462 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13776.2967.1 ID=prot_Ecto-sp13_S_contig13776.2967.1|Name=mRNA_Ecto-sp13_S_contig13776.2967.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=53bp
GSTLLGSTNAAVVAAQKERHSADAGVQCSRPAQSSDQLMGQVARGGCGCT
VM*
back to top