prot_Ecto-sp13_S_contig13772.2962.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13772.2962.1
Unique Nameprot_Ecto-sp13_S_contig13772.2962.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length373
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13772.2962.1 vs. uniprot
Match: A0A6H5L4E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4E4_9PHAE)

HSP 1 Score: 451 bits (1159), Expect = 3.980e-154
Identity = 329/373 (88.20%), Postives = 335/373 (89.81%), Query Frame = 0 
Query:    1 MNVIAPTTVAMTTAAXXXXXXXXXXXXXXXXXSAGENVSGDAGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSESRLGSVAEDCFSSAASFGSVTQTKPVGTGTSTWKGSFVKGSRRCCGCVPLSRGGSSAGARVSSGQAGAPETFDGEGDGGGKPQEPAEKGKSKGGFRPRHRRGHSTGHIAHGTNPSARAARITQPQGWEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGRETVLSWGRRSGSWGAGGVAAADREFNRILKSGIDVFKHSSTPESTQQWVDVVPKRIKEFLSRSCPLEDENEGLVTLFLDKERENLCWCPPGAAELVPDERYSLSVRSLV 373
            +NV APTTVA TT A                 SAGENVSGDAGER     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   SESR+G+VAEDCFSS+ASFGSVTQTKPVGTGTSTWKGSFVKGSR CC CVPLSRGGSSA AR+SSGQAGAPETFDGEGDG GKPQEP EKGK K GFRPRHRRGHSTGHIAHGTNPSARAARITQPQGWE  XXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGRETVLSWGRRSGSWGAGGVAAADREFNRILKSGIDVFKHSST ESTQQWVDVVPKRIKEFLSR+CPLEDENEGLVTLFLDKERENLCWCPPGAAELVPDERYSLSVRSLV
Sbjct:   27 VNVKAPTTVA-TTKAAASVSSRRRTRVEDGGNSAGENVSGDAGERERPQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---SESRVGNVAEDCFSSSASFGSVTQTKPVGTGTSTWKGSFVKGSRCCCSCVPLSRGGSSADARLSSGQAGAPETFDGEGDGWGKPQEPTEKGKGKDGFRPRHRRGHSTGHIAHGTNPSARAARITQPQGWEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGRETVLSWGRRSGSWGAGGVAAADREFNRILKSGIDVFKHSSTSESTQQWVDVVPKRIKEFLSRTCPLEDENEGLVTLFLDKERENLCWCPPGAAELVPDERYSLSVRSLV 395
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BLAST of mRNA_Ecto-sp13_S_contig13772.2962.1 vs. uniprot
Match: D8LGU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGU4_ECTSI)

HSP 1 Score: 430 bits (1106), Expect = 2.270e-146
Identity = 254/272 (93.38%), Postives = 257/272 (94.49%), Query Frame = 0 
Query:  102 ESRLGSVAEDCFSSAASFGSVTQTKPVGTGTSTWKGSFVKGSRRCCGCVPLSRGGSSAGARVSSGQAGAPETFDGEGDGGGKPQEPAEKGKSKGGFRPRHRRGHSTGHIAHGTNPSARAARITQPQGWEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGRETVLSWGRRSGSWGAGGVAAADREFNRILKSGIDVFKHSSTPESTQQWVDVVPKRIKEFLSRSCPLEDENEGLVTLFLDKERENLCWCPPGAAELVPDERYSLSVRSLV 373
            ESR+GS AED FSS+ASFGSVTQTKPVGTGTSTWKGSFVKGSR CC CVPLSR GSSA ARVSSGQAGAPETFDGE DG  KPQEP EKGK KGGFRPRHRRGHSTGHIAHGTNPSARAARITQPQGWE  XXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGRETVLSWGRRSGSWGAGGVAAADREFNRILKSG+DVFKH ST ESTQQWVDVVPKRIKEFLSRSCPLEDENEGLVTLFLDKERENLCWCPPGAAELVPDERYSLSVRSLV
Sbjct:  105 ESRVGSGAEDRFSSSASFGSVTQTKPVGTGTSTWKGSFVKGSRCCCSCVPLSRRGSSADARVSSGQAGAPETFDGESDGWVKPQEPTEKGKGKGGFRPRHRRGHSTGHIAHGTNPSARAARITQPQGWEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGRETVLSWGRRSGSWGAGGVAAADREFNRILKSGVDVFKHCSTRESTQQWVDVVPKRIKEFLSRSCPLEDENEGLVTLFLDKERENLCWCPPGAAELVPDERYSLSVRSLV 376
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13772.2962.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L4E4_9PHAE3.980e-15488.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGU4_ECTSI2.270e-14693.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..373
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13772contigEcto-sp13_S_contig13772:3..3336 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13772.2962.1mRNA_Ecto-sp13_S_contig13772.2962.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13772 3..3366 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13772.2962.1 ID=prot_Ecto-sp13_S_contig13772.2962.1|Name=mRNA_Ecto-sp13_S_contig13772.2962.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=373bp
MNVIAPTTVAMTTAAAASASSRRRTRGDGGGNSAGENVSGDAGERERPQQ
QQQQQQKEAEGRGAATPTKASAEPPLPPLSMQHEGIAGGNGGGDGDGGGG
SESRLGSVAEDCFSSAASFGSVTQTKPVGTGTSTWKGSFVKGSRRCCGCV
PLSRGGSSAGARVSSGQAGAPETFDGEGDGGGKPQEPAEKGKSKGGFRPR
HRRGHSTGHIAHGTNPSARAARITQPQGWEGGGGGSSATTSTTSSTGSTA
LAVAAASGGGEGGRETVLSWGRRSGSWGAGGVAAADREFNRILKSGIDVF
KHSSTPESTQQWVDVVPKRIKEFLSRSCPLEDENEGLVTLFLDKERENLC
WCPPGAAELVPDERYSLSVRSLV
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