prot_Ecto-sp13_S_contig13770.2961.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13770.2961.1
Unique Nameprot_Ecto-sp13_S_contig13770.2961.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length278
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13770.2961.1 vs. uniprot
Match: A0A6H5JBF4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBF4_9PHAE)

HSP 1 Score: 214 bits (545), Expect = 1.830e-65
Identity = 122/170 (71.76%), Postives = 124/170 (72.94%), Query Frame = 0 
Query:   46 MADMSKARSSSIDLGATVVVKRDGELLGQRGSVVDKKQGWYKVQLPGVDGIKSFRWAEIKEMEAPPPSPPPSANPSPIKPQAPSPSKKISSESTXXXXXXXXXXXDXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTVTMRRRITRGRPSENDAGVTPNSSAAGALDQPDQ 215
            MAD SKARSSSIDLGATVVVKRDGELLGQRGSVVDK QGWYKVQLPGVDGIKSFRWAEIKEMEAPPPSPPPSA PSPIKPQAPSP KK SS ST           D                           EKTVTMRRR+TRGRPSENDAGVTP+SSAAG  DQPDQ
Sbjct:    1 MADKSKARSSSIDLGATVVVKRDGELLGQRGSVVDKNQGWYKVQLPGVDGIKSFRWAEIKEMEAPPPSPPPSAIPSPIKPQAPSPFKKNSSVSTAAAAVVGVAG-DKSSSRGKAAGGFPPRHPSTASAASVADEKTVTMRRRLTRGRPSENDAGVTPSSSAAGTSDQPDQ 169
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BLAST of mRNA_Ecto-sp13_S_contig13770.2961.1 vs. uniprot
Match: D8LJ46_ECTSI (Similar to deoxynucleotidyltransferase, terminal, interacting protein 2, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ46_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 7.640e-47
Identity = 109/172 (63.37%), Postives = 111/172 (64.53%), Query Frame = 0 
Query:   46 MADMSKARSSSIDLGATVVVKRDGELLGQRGSVVDKKQGWYKVQLPGVDGIKSFRWAEIKEMEAPPPSPPPSANPSPIKPQAPSPSKKISSESTXXXXXXXXXXXDXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTVTMRRRITRGRPSENDAGVTPNSSAAGALDQPDQER 217
            M D  KARSSSIDLGATVVVKRDGELLGQRGSVVDKKQGWYKVQLPGVDGIKSFRWAEIKEMEAPPP          IKPQAP           XXXXXXX    D                           EKTVTMRRR+TRG PSENDAGVTP+SS     DQPDQER
Sbjct:    1 MEDKPKARSSSIDLGATVVVKRDGELLGQRGSVVDKKQGWYKVQLPGVDGIKSFRWAEIKEMEAPPPXXXXXXXXXXIKPQAPXXXXXXXXXXXXXXXXXXGVAGDKSSSRGKAAGALPPRHPSTASAASAADEKTVTMRRRLTRGHPSENDAGVTPSSSTPEVSDQPDQER 172
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13770.2961.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JBF4_9PHAE1.830e-6571.76Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LJ46_ECTSI7.640e-4763.37Similar to deoxynucleotidyltransferase, terminal, ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13770contigEcto-sp13_S_contig13770:1052..4551 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13770.2961.1mRNA_Ecto-sp13_S_contig13770.2961.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13770 1026..4551 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13770.2961.1 ID=prot_Ecto-sp13_S_contig13770.2961.1|Name=mRNA_Ecto-sp13_S_contig13770.2961.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=278bp
MAMYPIAPHLRTIYEDRGVFTTTHHIPHTRHVSTCWLCLYGRRIAMADMS
KARSSSIDLGATVVVKRDGELLGQRGSVVDKKQGWYKVQLPGVDGIKSFR
WAEIKEMEAPPPSPPPSANPSPIKPQAPSPSKKISSESTAAAAAVVGVAG
DKSSSRGKAAGGLPPRHPSAASAASAADEKTVTMRRRITRGRPSENDAGV
TPNSSAAGALDQPDQEREDEEEEEEKARGGSAGRTADVYDDEETESEANR
EVDEDETDLDDVEEGGGGGADTDVDEGH
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