prot_Ecto-sp13_S_contig13766.2958.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13766.2958.1
Unique Nameprot_Ecto-sp13_S_contig13766.2958.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length240
Homology
BLAST of mRNA_Ecto-sp13_S_contig13766.2958.1 vs. uniprot
Match: D7FTX9_ECTSI (U3 small nucleolar ribonucleoprotein protein MPP10 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTX9_ECTSI)

HSP 1 Score: 432 bits (1110), Expect = 8.520e-147
Identity = 233/239 (97.49%), Postives = 236/239 (98.74%), Query Frame = 0
Query:    1 RDLQGPTVRKEAPHLSQDKSKEGLGELYEKEFLKKTMGVTEDDPQKGLKNELKHLFSKLCGKLDALCNFHYTPKAAIPEMKVQADVAAIAMEEVLPSSVADAEALAPEELYKKKRGREAEFLEGGAEMSQEDRKRSRSSKKAVRRKARRQAQAAQKLVSKLNPGLGNKYEKAKMMRDIQGAKNVTTATGGEESTGREFSTSAKFFSQLQESVTASVKSAGKGMEGDVKDMNKKAAQLRL 239
            RDLQGPTVRKEAPHLSQDKSKEGLGELYEKEFLKKTMGVTEDDPQKGLKNELKHLFSKLCGKLDALCNFHYTPKAAIPEMKVQADVAAIAMEEVLPSSVADAEALAPEELYKKKRGREAEFLEGGAEMSQEDRKRSRSSKKAVRRKARRQA+AAQKLVSKLNPGLGNKYEKAKMMRDIQGAKNVTTATGGEESTGREFSTSAKFFSQLQESVTASVKS GKGM+GD KD +KKAAQLRL
Sbjct:  375 RDLQGPTVRKEAPHLSQDKSKEGLGELYEKEFLKKTMGVTEDDPQKGLKNELKHLFSKLCGKLDALCNFHYTPKAAIPEMKVQADVAAIAMEEVLPSSVADAEALAPEELYKKKRGREAEFLEGGAEMSQEDRKRSRSSKKAVRRKARRQAEAAQKLVSKLNPGLGNKYEKAKMMRDIQGAKNVTTATGGEESTGREFSTSAKFFSQLQESVTASVKSTGKGMDGDAKDTSKKAAQLRL 613          
BLAST of mRNA_Ecto-sp13_S_contig13766.2958.1 vs. uniprot
Match: A0A835YNW6_9STRA (Mpp10 protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNW6_9STRA)

HSP 1 Score: 229 bits (583), Expect = 5.340e-71
Identity = 123/211 (58.29%), Postives = 158/211 (74.88%), Query Frame = 0
Query:    9 RKEAPHLSQDKSKEGLGELYEKEFLKKTMGVTEDDPQKGLKNELKHLFSKLCGKLDALCNFHYTPKAAIPEMKVQADVAAIAMEEVLPSSVADAEALAPEELYKKKRGREAEFLEGGAEMSQEDRKRSRSSKKAVRRKARRQAQAAQKLVSKLNPGLGNKYEKAKMMRDIQGAKNVTTATGGEESTGREFSTSAKFFSQLQESVTASVKSA 219
            R++AP +S DKS EGL  +YEKE+LK+ +GV EDDP K LK EL+  F++LCGKLDALCNFH+ P+A +PE+ V  DV AIAMEE LP+ V+ A+ LAPEE+Y +KRGR A FLEGGAEM Q++R R+R +KK  R KAR+Q +A QKLVS+ NPGLGN YE+ K++ DI+GA+NV      +  TG++FSTS KFF  LQ+ V   VK A
Sbjct:   87 REDAPEVSMDKSTEGLAAVYEKEYLKQALGVEEDDPSKDLKEELRRDFARLCGKLDALCNFHFRPRAHLPEVAVATDVPAIAMEEALPTGVSTADGLAPEEVYARKRGRRAVFLEGGAEMDQDERNRARLAKKRSRNKARKQTEAEQKLVSRANPGLGNPYEQRKLLADIRGARNVMEGAA-DARTGKDFSTSTKFFGALQKQVAKGVKDA 296          
BLAST of mRNA_Ecto-sp13_S_contig13766.2958.1 vs. uniprot
Match: A0A2P4YHT8_9STRA (U3 small nucleolar ribonucleoprotein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YHT8_9STRA)

HSP 1 Score: 189 bits (481), Expect = 6.600e-57
Identity = 108/207 (52.17%), Postives = 148/207 (71.50%), Query Frame = 0
Query:   15 LSQDKSKEGLGELYEKEFLKKTMGVTEDDPQKGLKNELKHLFSKLCGKLDALCNFHYTPKAAIPEMKVQADVAAIAMEEVLPSSVADAEALAPEELYKKKRGREAEFLEGGAEMSQEDRKRSRSSKKAVRRKARRQAQAAQKLVSKLNPGLGNKYEKAKMMRDIQGAKNVTTATGGEESTGREFSTSAKFFSQLQESVTASVKSAGK 221
            +S +KSKEGLGE+YEKE++K  MG   DD  K  + E++ +F  LC KLDAL N+H+TPK A+ E++V+  V AIAMEEV+P SV+DA   APEE+Y+KKR R    L+   EM+Q +RK  R++KK  RRK +RQ +  ++LV+KLNPGLGNKYEK KM+  I GAKN+TT    E S+ ++FS S +FFS+LQ+ V   +++A K
Sbjct:   19 VSMEKSKEGLGEIYEKEYMKTAMGFEADDESKQDQEEIEVMFKSLCWKLDALSNYHFTPKPAVKELQVKPAVPAIAMEEVVPISVSDANLKAPEEVYEKKRKRGEAVLQSKEEMTQTERKALRNAKKHARRKEKRQREFDERLVAKLNPGLGNKYEKKKMLESIAGAKNITTGKQIEGSS-KQFSNSKEFFSRLQDEVQEKIRNASK 224          
BLAST of mRNA_Ecto-sp13_S_contig13766.2958.1 vs. uniprot
Match: A0A6V1QZP6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QZP6_HETAK)

HSP 1 Score: 195 bits (495), Expect = 7.180e-56
Identity = 116/243 (47.74%), Postives = 167/243 (68.72%), Query Frame = 0
Query:    9 RKEAPHLSQDKSKEGLGELYEKEFLKKTMGVTEDDPQKGLKNELKHLFSKLCGKLDALCNFHYTPKAAIPEMKVQADVAAIAMEEVLPSSVADAEALAPEELYKKKRGREAEFLEGGAEMSQEDRKRSRSSKKAVRRKARRQAQAAQKLVSKLNPGLGNKYEKAKMMRDIQGAKNVTTATGGEESTG-----REFSTSAKFFSQLQESVTA-------SVKSAGKGMEGDVKDMNKKAAQLRL 239
            R E P +S +KSK GLGELYEKE+LK+ MGV ++DP K  K E+  +F KLC KLD+L NFH+TPK  IP+++V+ +V AIA+EEVLP++V+ A+ALAPEE++ K +GR+   L+   EM QE+RKR+R+ KKA RRK R++ +A ++LV+KLNPG+GN YEK K++  ++ +KNV      + S+G      +F TSAKFF++LQE  +        S K+ G+ M    +    K+A L+L
Sbjct:  262 RAELPEVSTEKSKAGLGELYEKEYLKQVMGVEDEDPNKAEKEEMAKIFKKLCYKLDSLSNFHFTPKPVIPDLQVKVNVPAIALEEVLPAAVSAADALAPEEVHAKAKGRKG-VLQAREEMEQEERKRARAGKKAARRKDRQRKEADKRLVAKLNPGMGNPYEKEKILESLK-SKNVVEGKNLQSSSGDPDGSSDFKTSAKFFAKLQEQTSKEFANAADSHKNRGESMGNKRRKKGSKSASLKL 502          
BLAST of mRNA_Ecto-sp13_S_contig13766.2958.1 vs. uniprot
Match: G4YNZ1_PHYSP (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=G4YNZ1_PHYSP)

HSP 1 Score: 187 bits (476), Expect = 1.170e-54
Identity = 107/205 (52.20%), Postives = 146/205 (71.22%), Query Frame = 0
Query:   15 LSQDKSKEGLGELYEKEFLKKTMGVTEDDPQKGLKNELKHLFSKLCGKLDALCNFHYTPKAAIPEMKVQADVAAIAMEEVLPSSVADAEALAPEELYKKKRGREAEFLEGGAEMSQEDRKRSRSSKKAVRRKARRQAQAAQKLVSKLNPGLGNKYEKAKMMRDIQGAKNVTTATGGEESTGREFSTSAKFFSQLQESVTASVKSA 219
            +S +KSKEGLGE+YEKE++K  MG   DD  K  + E++ +F  LC KLDAL N+H+TPK A+ E++V+  V AIAMEEV+P SV+DA   APEE+Y KKR R    L+   EM+Q +RK  R++KK  RRK +RQ +  ++LV+KLNPGLGNKYEK KM+  I GAKN+TT    E S+ ++FS S +FFS+LQ+ V   +++A
Sbjct:  137 VSMEKSKEGLGEIYEKEYMKTAMGFEADDESKQDQEEIEVMFKSLCWKLDALSNYHFTPKPAVKELQVKPAVPAIAMEEVVPISVSDANLKAPEEVYDKKRKRGEAVLQSKEEMTQSERKALRNAKKHARRKEKRQREFDERLVAKLNPGLGNKYEKKKMLESIAGAKNITTGKQIEGSS-KQFSNSKEFFSRLQDEVQEKIRNA 340          
BLAST of mRNA_Ecto-sp13_S_contig13766.2958.1 vs. uniprot
Match: H3GM34_PHYRM (U3 small nucleolar ribonucleoprotein protein MPP10 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GM34_PHYRM)

HSP 1 Score: 190 bits (482), Expect = 3.250e-53
Identity = 109/205 (53.17%), Postives = 146/205 (71.22%), Query Frame = 0
Query:   15 LSQDKSKEGLGELYEKEFLKKTMGVTEDDPQKGLKNELKHLFSKLCGKLDALCNFHYTPKAAIPEMKVQADVAAIAMEEVLPSSVADAEALAPEELYKKKRGREAEFLEGGAEMSQEDRKRSRSSKKAVRRKARRQAQAAQKLVSKLNPGLGNKYEKAKMMRDIQGAKNVTTATGGEESTGREFSTSAKFFSQLQESVTASVKSA 219
            +S +KSKEGLGE+YEKE++K  MG   DD  K  + E++ +F  LC KLDAL N+H+TPK A+ E+KV+  V AIAMEEV+P SV+DA   APEE+Y+KKR R    L+   EM+Q +RK  R++KK  RRK  RQ +  ++LV+KLNPGLGNKYEK KM+  I GAKN+TT    E S+ ++FS S +FFS+LQ+ V   ++SA
Sbjct:  388 VSMEKSKEGLGEIYEKEYMKTAMGFEADDESKQDQEEIEVMFKSLCWKLDALSNYHFTPKPAVKELKVKPAVPAIAMEEVVPISVSDANLKAPEEVYEKKRKRGEAVLQSKEEMTQTERKALRNAKKHARRKENRQREFDERLVAKLNPGLGNKYEKKKMLESIAGAKNITTGKQIEGSS-KQFSNSKEFFSRLQDEVQEKIRSA 591          
BLAST of mRNA_Ecto-sp13_S_contig13766.2958.1 vs. uniprot
Match: A0A2D4C329_PYTIN (U3 small nucleolar ribonucleoprotein, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C329_PYTIN)

HSP 1 Score: 182 bits (461), Expect = 8.760e-53
Identity = 107/209 (51.20%), Postives = 142/209 (67.94%), Query Frame = 0
Query:    9 RKEAPHLSQDKSKEGLGELYEKEFLKKTMGVTEDDPQKGLKNELKHLFSKLCGKLDALCNFHYTPKAAIPEMKVQADVAAIAMEEVLPSSVADAEALAPEELYKKKRGREAEFLEGGAEMSQEDRKRSRSSKKAVRRKARRQAQAAQKLVSKLNPGLGNKYEKAKMMRDIQGAKNVTTATGGEESTGREFSTSAKFFSQLQESVTASVK 217
            +K+   +S +KSKEGLGE+YEKE+LK  MG   DD  K  + E+  +F  LC KLDAL N+ +TPK  + E++V+  V AIAMEEV+P SV+DA   APEE+Y KKR R    L+   EM+QE+R   R +KK  RRK +RQ +A ++LV+KLNPGLGNKYEK KM+  I  AKN+T     E ST ++FS S +FFS+LQE V   ++
Sbjct:   97 KKKLVDVSMEKSKEGLGEIYEKEYLKTAMGFEADDESKQDQEEIDVMFRSLCWKLDALSNYQFTPKPMVKELQVKPSVPAIAMEEVVPISVSDANLRAPEEIYDKKRKRGEAVLQSKEEMTQEERNALRLAKKRSRRKEKRQQEADERLVAKLNPGLGNKYEKKKMLESIASAKNITKGKEIEGST-KQFSNSKEFFSRLQEEVQTEIR 304          
BLAST of mRNA_Ecto-sp13_S_contig13766.2958.1 vs. uniprot
Match: A0A3M6VNB8_9STRA (U3 small nucleolar ribonucleoprotein protein MPP10 n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VNB8_9STRA)

HSP 1 Score: 189 bits (480), Expect = 8.880e-53
Identity = 108/211 (51.18%), Postives = 149/211 (70.62%), Query Frame = 0
Query:    9 RKEAPHLSQDKSKEGLGELYEKEFLKKTMGVTEDDPQKGLKNELKHLFSKLCGKLDALCNFHYTPKAAIPEMKVQADVAAIAMEEVLPSSVADAEALAPEELYKKKRGREAEFLEGGAEMSQEDRKRSRSSKKAVRRKARRQAQAAQKLVSKLNPGLGNKYEKAKMMRDIQGAKNVTTATGGEESTGREFSTSAKFFSQLQESVTASVKSA 219
            +K+   +S +KSKEGLGE+YEKE++K  MG   DD  K  + E+  +F  LC KLDAL N+H+TPK A+ E++V+  V AIAMEEV+P SV+DA   APEE+Y+KKR R    L+   EM+Q +RK  R++KK  RRK +RQ +  ++LV+KLNPGLGNKYEK KM+  I GAKN+TT    E S+ ++FS S +FFS+LQ+ V   +++A
Sbjct:  406 KKKIEEVSMEKSKEGLGEIYEKEYMKTAMGFEADDESKQDQEEIDVMFKSLCWKLDALSNYHFTPKPAVKELQVKPAVPAIAMEEVVPISVSDANLKAPEEVYEKKRKRGEAVLQSKEEMTQNERKALRNAKKHARRKEKRQREFDERLVAKLNPGLGNKYEKKKMLESIAGAKNITTGKQIEGSS-KQFSNSKEFFSRLQDEVQEKIRTA 615          
BLAST of mRNA_Ecto-sp13_S_contig13766.2958.1 vs. uniprot
Match: W2QWN2_PHYPN (U3 small nucleolar ribonucleoprotein protein MPP10 n=23 Tax=Phytophthora TaxID=4783 RepID=W2QWN2_PHYPN)

HSP 1 Score: 188 bits (477), Expect = 1.780e-52
Identity = 107/205 (52.20%), Postives = 147/205 (71.71%), Query Frame = 0
Query:   15 LSQDKSKEGLGELYEKEFLKKTMGVTEDDPQKGLKNELKHLFSKLCGKLDALCNFHYTPKAAIPEMKVQADVAAIAMEEVLPSSVADAEALAPEELYKKKRGREAEFLEGGAEMSQEDRKRSRSSKKAVRRKARRQAQAAQKLVSKLNPGLGNKYEKAKMMRDIQGAKNVTTATGGEESTGREFSTSAKFFSQLQESVTASVKSA 219
            +S +KSKEGLGE+YEKE++K  MG   DD  K  + E++ +F  LC KLDAL N+H+TPK A+ E++V+  V AIAMEEV+P SV+DA   APEE+Y+KKR R    L+   EM+Q +RK  R++KK  RRK +RQ +  ++LV+KLNPGLGNKYEK KM+  I GAKN+TT    E S+ ++FS S +FF++LQ+ V   ++SA
Sbjct:  392 VSMEKSKEGLGEIYEKEYMKTAMGFEADDESKQDQEEIEVMFKSLCWKLDALSNYHFTPKPAVKELQVKPAVPAIAMEEVVPISVSDANLKAPEEVYEKKRKRGEAVLQSKEEMTQTERKALRNAKKHARRKEKRQREFDERLVAKLNPGLGNKYEKKKMLESIAGAKNITTGKQIEGSS-KQFSNSKEFFTRLQDEVQEKIRSA 595          
BLAST of mRNA_Ecto-sp13_S_contig13766.2958.1 vs. uniprot
Match: K3WHQ1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHQ1_GLOUD)

HSP 1 Score: 185 bits (470), Expect = 2.590e-52
Identity = 109/216 (50.46%), Postives = 145/216 (67.13%), Query Frame = 0
Query:    9 RKEAPHLSQDKSKEGLGELYEKEFLKKTMGVTEDDPQKGLKNELKHLFSKLCGKLDALCNFHYTPKAAIPEMKVQADVAAIAMEEVLPSSVADAEALAPEELYKKKRGREAEFLEGGAEMSQEDRKRSRSSKKAVRRKARRQAQAAQKLVSKLNPGLGNKYEKAKMMRDIQGAKNVTTATGGEESTGREFSTSAKFFSQLQESVTASVKSAGKGME 224
            +K+   +S +KSKEGLGE+YEKE++K  MG   DD  K  + E+  +F  LC KLDAL N+ +TPK  + E++V+  V AIAMEEV+P SV+DA   APEE+Y+KKR R    L+   EMSQE RK  R++KK  RRK  +Q +A ++LV+KLNPGLGNKY K K+M  I  AKNVTT    E ST ++FS S +FF++LQE V   ++   K  E
Sbjct:  273 KKKLEDVSMEKSKEGLGEIYEKEYMKSAMGFEMDDESKQDQEEIDVMFKSLCWKLDALSNYQFTPKPMVKELQVKPSVPAIAMEEVVPISVSDANLKAPEEIYEKKRKRGEAVLQSKEEMSQEQRKALRNAKKQTRRKENKQKEADERLVAKLNPGLGNKYAKKKLMESISNAKNVTTGKAIEGST-KQFSNSKEFFTRLQEEVKDQIQKKAKTNE 487          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13766.2958.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTX9_ECTSI8.520e-14797.49U3 small nucleolar ribonucleoprotein protein MPP10... [more]
A0A835YNW6_9STRA5.340e-7158.29Mpp10 protein-domain-containing protein n=1 Tax=Tr... [more]
A0A2P4YHT8_9STRA6.600e-5752.17U3 small nucleolar ribonucleoprotein (Fragment) n=... [more]
A0A6V1QZP6_HETAK7.180e-5647.74Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
G4YNZ1_PHYSP1.170e-5452.20Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
H3GM34_PHYRM3.250e-5353.17U3 small nucleolar ribonucleoprotein protein MPP10... [more]
A0A2D4C329_PYTIN8.760e-5351.20U3 small nucleolar ribonucleoprotein, putative n=1... [more]
A0A3M6VNB8_9STRA8.880e-5351.18U3 small nucleolar ribonucleoprotein protein MPP10... [more]
W2QWN2_PHYPN1.780e-5252.20U3 small nucleolar ribonucleoprotein protein MPP10... [more]
K3WHQ1_GLOUD2.590e-5250.46Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012173U3 small nucleolar ribonucleoprotein complex, subunit Mpp10PFAMPF04006Mpp10coord: 10..212
e-value: 1.4E-56
score: 192.3
IPR012173U3 small nucleolar ribonucleoprotein complex, subunit Mpp10PANTHERPTHR17039U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10coord: 8..212

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13766contigEcto-sp13_S_contig13766:7..3793 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13766.2958.1mRNA_Ecto-sp13_S_contig13766.2958.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13766 7..3793 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13766.2958.1 ID=prot_Ecto-sp13_S_contig13766.2958.1|Name=mRNA_Ecto-sp13_S_contig13766.2958.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=240bp
RDLQGPTVRKEAPHLSQDKSKEGLGELYEKEFLKKTMGVTEDDPQKGLKN
ELKHLFSKLCGKLDALCNFHYTPKAAIPEMKVQADVAAIAMEEVLPSSVA
DAEALAPEELYKKKRGREAEFLEGGAEMSQEDRKRSRSSKKAVRRKARRQ
AQAAQKLVSKLNPGLGNKYEKAKMMRDIQGAKNVTTATGGEESTGREFST
SAKFFSQLQESVTASVKSAGKGMEGDVKDMNKKAAQLRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012173Mpp10