mRNA_Ecto-sp13_S_contig13760.2955.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13760.2955.1 vs. uniprot
Match: D7G070_ECTSI (Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G070_ECTSI) HSP 1 Score: 336 bits (861), Expect = 5.010e-111 Identity = 197/206 (95.63%), Postives = 202/206 (98.06%), Query Frame = 3
Query: 51 MAASYSTARQGVLRALARSPKLGNPLPATAVRSLNSVQVPALQQQLQLRRETLSNSSQAWSVEPQQXXXXXXXXXXXXXXXXXXXXXDFKPKRKAVPEGSDEVSDLIKKQVESNPVMLYMKGTPAQPQCGFSKQVVSILHSQGVSFSSVNVLDYPPLREGIKTFSEWPTIPQLYVKGEFVGGCDILTQLHQSGDLETMLKEAKVKD 668
MAASYS ARQG+LRALARSPKLG+PLPAT +RSL SVQVPALQQQLQLRRETLS SSQAWSVEPQQXXXXXXXXXXXXXXXXXXXXXDFKPKRKAVPEG+DEVSDLIKKQVESNPVMLYMKGTPAQPQCGFSKQVVSILHSQGVSFSSVNVLDYPPLREGIKTFSEWPTIPQLYVKGEFVGGCDILTQLHQSGDLETMLKEAK+KD
Sbjct: 1 MAASYSAARQGLLRALARSPKLGSPLPATPIRSLTSVQVPALQQQLQLRRETLSKSSQAWSVEPQQXXXXXXXXXXXXXXXXXXXXXDFKPKRKAVPEGADEVSDLIKKQVESNPVMLYMKGTPAQPQCGFSKQVVSILHSQGVSFSSVNVLDYPPLREGIKTFSEWPTIPQLYVKGEFVGGCDILTQLHQSGDLETMLKEAKLKD 206
BLAST of mRNA_Ecto-sp13_S_contig13760.2955.1 vs. uniprot
Match: A0A835Z0J8_9STRA (Monothiol glutaredoxin-5, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0J8_9STRA) HSP 1 Score: 181 bits (459), Expect = 4.280e-51 Identity = 81/115 (70.43%), Postives = 99/115 (86.09%), Query Frame = 3
Query: 312 DFKPKRKAVPEGSDEVSDLIKKQVESNPVMLYMKGTPAQPQCGFSKQVVSILHSQGVSFSSVNVLDYPPLREGIKTFSEWPTIPQLYVKGEFVGGCDILTQLHQSGDLETMLKEA 656
DFKPKRK VPEG E+ D+I +QV N +M+YMKGTP+ P CGFS QVV ILH+QGV FSS+N+LDYP +REG+K FS+WPTIPQ+Y+ GEFVGGCDI+TQ+H+SG+LETMLKEA
Sbjct: 67 DFKPKRKEVPEGDAEIHDMIAQQVRDNKLMVYMKGTPSAPACGFSMQVVRILHAQGVDFSSINILDYPAIREGVKKFSDWPTIPQVYLNGEFVGGCDIMTQMHKSGELETMLKEA 181
BLAST of mRNA_Ecto-sp13_S_contig13760.2955.1 vs. uniprot
Match: A0A6G0XHZ8_9STRA (Glutaredoxin domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHZ8_9STRA) HSP 1 Score: 168 bits (425), Expect = 1.280e-46 Identity = 78/119 (65.55%), Postives = 96/119 (80.67%), Query Frame = 3
Query: 312 DFKPKRKAVPEGS-DEVSDLIKKQVESNPVMLYMKGTPAQPQCGFSKQVVSILHSQGVSFSSVNVLDYPPLREGIKTFSEWPTIPQLYVKGEFVGGCDILTQLHQSGDLETMLKEAKVK 665
DFKPK A P D+V LIK VE+ P+MLYMKGTP+ PQCGFS+QVV ILH+QGVSF SVNVLD+P +REG+K FS+WPTIPQL+VKGEF+GGCDI+T +H+SG+LE + K+ K
Sbjct: 31 DFKPKYHAAPSSDKDDVLKLIKSHVETYPIMLYMKGTPSSPQCGFSRQVVQILHAQGVSFDSVNVLDHPEIREGVKEFSQWPTIPQLFVKGEFIGGCDIVTDMHKSGELEDLFKQLNDK 149
BLAST of mRNA_Ecto-sp13_S_contig13760.2955.1 vs. uniprot
Match: A0A485KR85_9STRA (Aste57867_10735 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KR85_9STRA) HSP 1 Score: 162 bits (410), Expect = 2.090e-44 Identity = 76/114 (66.67%), Postives = 93/114 (81.58%), Query Frame = 3
Query: 312 DFKPKRKAVPEGS-DEVSDLIKKQVESNPVMLYMKGTPAQPQCGFSKQVVSILHSQGVSFSSVNVLDYPPLREGIKTFSEWPTIPQLYVKGEFVGGCDILTQLHQSGDLETMLK 650
DFKPK A P DE+ LI+ V++ PVMLYMKGTP+ PQCGFS+QVV ILH+QGVSF SVNVLD+ +REG+K FS+WPTIPQL+VKGEFVGGCDI+T +H+SG+LE + K
Sbjct: 31 DFKPKYHAAPSSDKDEILKLIQSHVDTYPVMLYMKGTPSSPQCGFSRQVVQILHAQGVSFDSVNVLDHEEIREGVKEFSQWPTIPQLFVKGEFVGGCDIVTDMHKSGELEELFK 144
BLAST of mRNA_Ecto-sp13_S_contig13760.2955.1 vs. uniprot
Match: A0A1V9ZY72_9STRA (Monothiol glutaredoxin-5, mitochondrial n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZY72_9STRA) HSP 1 Score: 160 bits (405), Expect = 8.750e-44 Identity = 74/114 (64.91%), Postives = 93/114 (81.58%), Query Frame = 3
Query: 312 DFKPKRKAVPEGS-DEVSDLIKKQVESNPVMLYMKGTPAQPQCGFSKQVVSILHSQGVSFSSVNVLDYPPLREGIKTFSEWPTIPQLYVKGEFVGGCDILTQLHQSGDLETMLK 650
DFKPK A D+V LI+ V++ P+MLYMKGTP QPQCGFS+QVV ILH+QG+SF SVNVLD+P +REG+K FS+WPTIPQL+V GEFVGGCDI++ +H+SG+LE +LK
Sbjct: 25 DFKPKYHAAASAERDDVIKLIQSHVDTYPIMLYMKGTPTQPQCGFSRQVVQILHAQGISFDSVNVLDHPEIREGVKEFSQWPTIPQLFVNGEFVGGCDIVSDMHKSGELEELLK 138
BLAST of mRNA_Ecto-sp13_S_contig13760.2955.1 vs. uniprot
Match: A0A7R9UER6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UER6_9STRA) HSP 1 Score: 161 bits (408), Expect = 1.370e-43 Identity = 78/115 (67.83%), Postives = 90/115 (78.26%), Query Frame = 3
Query: 312 DFKPKRKAVPEGSDEVSDLIKKQVESNPVMLYMKGTPAQPQCGFSKQVVSILHSQGVSFSSVNVLDYPPLREGIKTFSEWPTIPQLYVKGEFVGGCDILTQLHQSGDLETMLKEA 656
DF P+RK V + +E+ LIKKQ N VMLYMKGTP QPQCGFS QV I+ QGV F+SVNVLDYP LRE IK +S WPTIPQLYV GEF+GGCDI+TQ+HQSG+LE + KEA
Sbjct: 71 DFAPQRKVVADNVEEMMALIKKQTTENKVMLYMKGTPNQPQCGFSAQVSKIMAVQGVDFASVNVLDYPLLRECIKEYSSWPTIPQLYVNGEFIGGCDIVTQMHQSGELEELFKEA 185
BLAST of mRNA_Ecto-sp13_S_contig13760.2955.1 vs. uniprot
Match: A0A7S2HJB1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HJB1_9STRA) HSP 1 Score: 159 bits (403), Expect = 2.420e-43 Identity = 73/116 (62.93%), Postives = 93/116 (80.17%), Query Frame = 3
Query: 312 DFKPKRKAVPEGSDEVSDLIKKQVESNPVMLYMKGTPAQPQCGFSKQVVSILHSQGVSFSSVNVLDYPPLREGIKTFSEWPTIPQLYVKGEFVGGCDILTQLHQSGDLETMLKEAK 659
DF PKRKA+ + DE +IK+ VESN +MLYMKG P+ P CGFS +VV L ++GV FSSVNVLDYP +REG+K FSEWPTIPQLY+ GEF+GGCDI+T +H+SG+L+ +L+E K
Sbjct: 38 DFAPKRKAI-DDEDEALKMIKEHVESNRIMLYMKGNPSMPMCGFSARVVQALQNEGVDFSSVNVLDYPQIREGVKKFSEWPTIPQLYIDGEFIGGCDIVTSMHESGELKEILEEKK 152
BLAST of mRNA_Ecto-sp13_S_contig13760.2955.1 vs. uniprot
Match: A0A397B097_9STRA (Glutaredoxin domain-containing protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A397B097_9STRA) HSP 1 Score: 159 bits (402), Expect = 2.900e-43 Identity = 74/114 (64.91%), Postives = 92/114 (80.70%), Query Frame = 3
Query: 312 DFKPKRKAVPEGS-DEVSDLIKKQVESNPVMLYMKGTPAQPQCGFSKQVVSILHSQGVSFSSVNVLDYPPLREGIKTFSEWPTIPQLYVKGEFVGGCDILTQLHQSGDLETMLK 650
DFKPK A P D+V LI+ V + PVMLYMKGTP+ PQCGFS+QVV ILH+QGVSF SVNVLD+ +R+G+K FS+WPTIPQL+VKGEF+GGCDI+T +H+SG+LE + K
Sbjct: 30 DFKPKYHAAPSSDKDDVLKLIENHVNTYPVMLYMKGTPSSPQCGFSRQVVQILHAQGVSFDSVNVLDHEEIRDGVKEFSQWPTIPQLFVKGEFIGGCDIVTDMHKSGELEELFK 143
BLAST of mRNA_Ecto-sp13_S_contig13760.2955.1 vs. uniprot
Match: A0A418EYG3_9STRA (Glutaredoxin domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418EYG3_9STRA) HSP 1 Score: 159 bits (402), Expect = 2.900e-43 Identity = 74/114 (64.91%), Postives = 92/114 (80.70%), Query Frame = 3
Query: 312 DFKPKRKAVPEGS-DEVSDLIKKQVESNPVMLYMKGTPAQPQCGFSKQVVSILHSQGVSFSSVNVLDYPPLREGIKTFSEWPTIPQLYVKGEFVGGCDILTQLHQSGDLETMLK 650
DFKPK A P D+V LI+ V + PVMLYMKGTP+ PQCGFS+QVV ILH+QGVSF SVNVLD+ +R+G+K FS+WPTIPQL+VKGEF+GGCDI+T +H+SG+LE + K
Sbjct: 30 DFKPKYHAAPSSDKDDVLKLIENHVNTYPVMLYMKGTPSSPQCGFSRQVVQILHAQGVSFDSVNVLDHEEIRDGVKEFSQWPTIPQLFVKGEFIGGCDIVTDMHKSGELEELFK 143
BLAST of mRNA_Ecto-sp13_S_contig13760.2955.1 vs. uniprot
Match: A0A067BUX8_SAPPC (Glutaredoxin domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BUX8_SAPPC) HSP 1 Score: 159 bits (402), Expect = 2.900e-43 Identity = 74/114 (64.91%), Postives = 91/114 (79.82%), Query Frame = 3
Query: 312 DFKPKRKAVPEGS-DEVSDLIKKQVESNPVMLYMKGTPAQPQCGFSKQVVSILHSQGVSFSSVNVLDYPPLREGIKTFSEWPTIPQLYVKGEFVGGCDILTQLHQSGDLETMLK 650
DFKPK A D+V LI+ V + P+MLYMKGTP PQCGFS+QVV I+H+QGVSF SVNVLD+P +REG+K FS+WPTIPQL+V GEFVGGCDI+T +H+SG+LE +LK
Sbjct: 31 DFKPKYHAAASAEPDDVLKLIQSHVSTYPIMLYMKGTPTSPQCGFSRQVVQIMHAQGVSFDSVNVLDHPEIREGVKEFSQWPTIPQLFVNGEFVGGCDIITDMHKSGELEDLLK 144 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13760.2955.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13760.2955.1 >prot_Ecto-sp13_S_contig13760.2955.1 ID=prot_Ecto-sp13_S_contig13760.2955.1|Name=mRNA_Ecto-sp13_S_contig13760.2955.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=207bp MAASYSTARQGVLRALARSPKLGNPLPATAVRSLNSVQVPALQQQLQLRRback to top mRNA from alignment at Ecto-sp13_S_contig13760:1241..4448+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13760.2955.1 ID=mRNA_Ecto-sp13_S_contig13760.2955.1|Name=mRNA_Ecto-sp13_S_contig13760.2955.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3208bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13760:1241..4448+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13760:1241..4448+ >mRNA_Ecto-sp13_S_contig13760.2955.1 ID=mRNA_Ecto-sp13_S_contig13760.2955.1|Name=mRNA_Ecto-sp13_S_contig13760.2955.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=621bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13760:1241..4448+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |