prot_Ecto-sp13_S_contig13755.2951.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13755.2951.1
Unique Nameprot_Ecto-sp13_S_contig13755.2951.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length582
Homology
BLAST of mRNA_Ecto-sp13_S_contig13755.2951.1 vs. uniprot
Match: D7G0M9_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M9_ECTSI)

HSP 1 Score: 415 bits (1066), Expect = 7.580e-131
Identity = 466/527 (88.43%), Postives = 474/527 (89.94%), Query Frame = 0
Query:    1 HLRRSDCKSVLQSGAGATMDCRNCGEVVDVVPDVLQQHSKRCRPRDKSTNDEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFIAGRALGSDDSDSDPGGPDGGLATAGSWSGAGGLPAAGGGIIGAMRRPLPPKKRWETAFEAWAGXXXXXXXXXXXXXXXXXXXXXXXXXEAAK--EVEDRYTCLASRAEESALVTVREVWRAEAMPEGGAGTATGEQQQQHRRQAVVVCRLVAEGGIERKKGEAGVAATLGFQVTDDRAPGAANAWAGFPVAAAVMAGGVADSAGVGAGASILKVEESSMRGRSAADVTKAMYAALLKRTGKHAKSAPTVRLVIVTPPWSASAPXXXXG-VDKKAGASAPASSCDGVGGMACLGRE 524
            H++ SDCK VLQ GAGATM+CRNCGEVVDVVPDVLQQHSKRCRPRDK TNDEA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      SFIAGRALGSDDSDSDPGG DGGL  AGSWSG            G MRRPLPPKKRWETAFEAWAGXXXXXXXXXXXXXXXXXXXX     EAA+  EVEDRY CLASRAEESALVTVREV RAEA+PEG AGTA GEQQQQHRRQAVVVCRLVAEGGIERKKGEAGVAATLGFQVTDDRAPG  NAWAGFPVAAAV+A GVADSAGVG GASILKVE+SSMRGRSA+DVTKAMYAALLKRTGKH KSA TVRLVIVTPPWSASAP    G VD KAGA APAS  DGVGGMACLGRE
Sbjct:  109 HVQMSDCKIVLQWGAGATMECRNCGEVVDVVPDVLQQHSKRCRPRDKITNDEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------SFIAGRALGSDDSDSDPGGTDGGLGRAGSWSGXXXXXXXXXXXXGVMRRPLPPKKRWETAFEAWAGXXXXXXXXXXXXXXXXXXXX-----EAAEVCEVEDRYPCLASRAEESALVTVREVRRAEALPEGAAGTAPGEQQQQHRRQAVVVCRLVAEGGIERKKGEAGVAATLGFQVTDDRAPGVTNAWAGFPVAAAVVAEGVADSAGVGTGASILKVEDSSMRGRSASDVTKAMYAALLKRTGKHGKSAATVRLVIVTPPWSASAPTPGGGGVDNKAGAFAPASPYDGVGGMACLGRE 624          
BLAST of mRNA_Ecto-sp13_S_contig13755.2951.1 vs. uniprot
Match: A0A6H5JEX0_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX0_9PHAE)

HSP 1 Score: 375 bits (964), Expect = 5.260e-114
Identity = 423/534 (79.21%), Postives = 431/534 (80.71%), Query Frame = 0
Query:    1 HLRRSDCKSVLQSGAGATMDCRNCGEVVDVVPDVLQQHSKRCRPRDKSTNDEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------SFIAGRALGSDDSDSDPGGPDGGLATAGSWSGAGGLPAAGGGIIGAMRRPLPPKKRWETAFEAWAGXXXXXXXXXXXXXXXXXXXXXXXXXEAAKEVEDRYTCLASRAEESALVTVREVWRAEAMPEGGAGTATGEQQQQHRRQAVVVCRLVAEGGIERKKGEAGVAATLGFQVTDDRAPGAANAWAGFPVAAAVMAGGVADSAGVGAGASILKVEESSMRGRSAADVTKAMYAALLKRTGKHAKSAPTVRLVIVTPPWSASAPXXXXGVDKKAGASAPASSCDGVGGMACLGRE 524
            H++ SDCK VLQ  AGATM+CRNCGEVVDVVPDVLQQHSKRCRPRDKST+    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                      SFIAGRALGSDDSDSDP GPDGGL  AGSW GAGGLPA GGGIIGAMRRPLPPKKRWETAFEAWAG                         EAAKEVEDRY CLA RAEESALVTVREV RAEA+ EGGAGTA              VCRLV EGGIE               VTDDRAPG ANAWAGFPVAAAV+AGGVADSAGVGAGASILKVEESSMRGRSAA+VTKAM+AALLKRTGKHAKSA TVRLVIVTPPW ASAP    GVD KAGASAPASS DGVGGMACLGRE
Sbjct:  261 HVQMSDCKIVLQWEAGATMECRNCGEVVDVVPDVLQQHSKRCRPRDKSTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSNLLDHRRQPLPLVDANSGGGSFIAGRALGSDDSDSDPEGPDGGLGRAGSWCGAGGLPAGGGGIIGAMRRPLPPKKRWETAFEAWAGGGEKNKGCVALPQPAAVAAA-----EAAKEVEDRYPCLAGRAEESALVTVREVRRAEALLEGGAGTAXXXXXXXXXXXXXXVCRLVVEGGIE---------------VTDDRAPGVANAWAGFPVAAAVVAGGVADSAGVGAGASILKVEESSMRGRSAAEVTKAMFAALLKRTGKHAKSAATVRLVIVTPPWLASAPPPGGGVDNKAGASAPASSYDGVGGMACLGRE 774          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13755.2951.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0M9_ECTSI7.580e-13188.43PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JEX0_9PHAE5.260e-11479.21PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13755contigEcto-sp13_S_contig13755:429..4393 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13755.2951.1mRNA_Ecto-sp13_S_contig13755.2951.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13755 427..4393 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13755.2951.1 ID=prot_Ecto-sp13_S_contig13755.2951.1|Name=mRNA_Ecto-sp13_S_contig13755.2951.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=582bp
HLRRSDCKSVLQSGAGATMDCRNCGEVVDVVPDVLQQHSKRCRPRDKSTN
DEAAAADAADAAGDAAVTPSESSSTSPPPLLPAQAPTLGGAVPSASQQLT
RSASLTSSTASGPAAAVPPKGGAGGGATARSRVGGGSSNGTGKRRGFPQN
GGGGRASPSTSEGGGGGGGGGGESGPPRLKRRVSTASAASSGSGQSGVMR
RGSTASSTSNLLDHRRQPPPLLDANSGGGSFIAGRALGSDDSDSDPGGPD
GGLATAGSWSGAGGLPAAGGGIIGAMRRPLPPKKRWETAFEAWAGGGEKN
KGGGASPQSAAAAAAAAAAAEAAKEVEDRYTCLASRAEESALVTVREVWR
AEAMPEGGAGTATGEQQQQHRRQAVVVCRLVAEGGIERKKGEAGVAATLG
FQVTDDRAPGAANAWAGFPVAAAVMAGGVADSAGVGAGASILKVEESSMR
GRSAADVTKAMYAALLKRTGKHAKSAPTVRLVIVTPPWSASAPPPGGGVD
KKAGASAPASSCDGVGGMACLGREVTPTLTAASAAEERLVLLCLLPARAT
QWREATVHYVETASGGTNGMIRTESTVMLKIP
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