prot_Ecto-sp13_S_contig13752.2948.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13752.2948.1
Unique Nameprot_Ecto-sp13_S_contig13752.2948.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length203
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13752.2948.1 vs. uniprot
Match: D7FRF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRF7_ECTSI)

HSP 1 Score: 264 bits (674), Expect = 3.040e-84
Identity = 162/202 (80.20%), Postives = 163/202 (80.69%), Query Frame = 0 
Query:    1 MSARRSPRLSPGKATTAAEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKPDKEEENGPSAYELQRLAKMKENAMMMASLGLGGAKDGMRKAVNSDAAQRAKARGLGPRPNKVYPARSRESARVRGKTPEGLPMEDPEEAFNRRRQGFDAQGTAAAXXXXXXXPRSPRIEGDVSMEATNGTLDGTVRLRQV 202
            MSARRSPRLSPGKATTA EP                           XXXXX       KKPDKEEENGPSAYELQRLAKMKENAMMMASLGLGGAKD MRKAVNSDAAQRAKARGLGPRPNKVYPARSRESARVRGKTPEGLPMEDPEEAFNRRRQGF AQGTAAAXXXXXX PRSPRIEGDVSMEATN TLDGTVRLRQ+
Sbjct:    1 MSARRSPRLSPGKATTAIEPVAGGGGRGARGPPNAKRLRRATAPEAAXXXXXRAASQEGKKPDKEEENGPSAYELQRLAKMKENAMMMASLGLGGAKDNMRKAVNSDAAQRAKARGLGPRPNKVYPARSRESARVRGKTPEGLPMEDPEEAFNRRRQGFGAQGTAAAXXXXXX-PRSPRIEGDVSMEATNSTLDGTVRLRQM 201
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BLAST of mRNA_Ecto-sp13_S_contig13752.2948.1 vs. uniprot
Match: A0A6H5K3Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Y8_9PHAE)

HSP 1 Score: 242 bits (617), Expect = 1.050e-76
Identity = 176/203 (86.70%), Postives = 176/203 (86.70%), Query Frame = 0 
Query:    1 MSARRSPRLSPGKATTAAEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKPDKEEENGPSAYELQRLAKMKENAMMMASLGLGGAKDGMRKAVNSDAAQRAKARGLGPRPNKVYPARSRESARVRGKTPEGLPMEDPEEAFNRRRQGFDAQGTAAAXXXXXXX--PRSPRIEGDVSMEATNGTLDGTVRLRQ 201
            MSARRSPRLSPGK  TA EP          XXXXXXXXXXXXXXXXXXXXXXXXXXXXX       ENGPSAYELQRLAKMKENAMMMASLGLGGAKD MRKAVNSDAAQRAKARGLGPRPNKVYPARSRESARVRGKTPEGLPMEDPEEAFNRRRQGFD QGT AA XXXXXX  PRSPRIEGDVSME TNGTLDGTVRLRQ
Sbjct:    1 MSARRSPRLSPGKVMTATEPVAGGGGHGARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENGPSAYELQRLAKMKENAMMMASLGLGGAKDSMRKAVNSDAAQRAKARGLGPRPNKVYPARSRESARVRGKTPEGLPMEDPEEAFNRRRQGFDGQGTTAAAXXXXXXXSPRSPRIEGDVSMEETNGTLDGTVRLRQ 203
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13752.2948.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FRF7_ECTSI3.040e-8480.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K3Y8_9PHAE1.050e-7686.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13752contigEcto-sp13_S_contig13752:2854..4433 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13752.2948.1mRNA_Ecto-sp13_S_contig13752.2948.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13752 2854..4433 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13752.2948.1 ID=prot_Ecto-sp13_S_contig13752.2948.1|Name=mRNA_Ecto-sp13_S_contig13752.2948.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=203bp
MSARRSPRLSPGKATTAAEPAAGGGDDGARGPPNAKRQRRATAPEVAANG
GARAASQEGKKPDKEEENGPSAYELQRLAKMKENAMMMASLGLGGAKDGM
RKAVNSDAAQRAKARGLGPRPNKVYPARSRESARVRGKTPEGLPMEDPEE
AFNRRRQGFDAQGTAAAAAAAAASPRSPRIEGDVSMEATNGTLDGTVRLR
QV*
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