mRNA_Ecto-sp13_S_contig13739.2938.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13739.2938.1
Unique NamemRNA_Ecto-sp13_S_contig13739.2938.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13739.2938.1 vs. uniprot
Match: D8LM73_ECTSI (MCM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM73_ECTSI)

HSP 1 Score: 484 bits (1247), Expect = 3.860e-160
Identity = 278/408 (68.14%), Postives = 278/408 (68.14%), Query Frame = 1 
Query:    1 RSMVILLQDDLVDSCKAGDDVVVVGELLRRWMPVFEGVRCDVQVTLRANSVTVQSGADQGSSQASKLSLSTRSSNSLPPWRVSEELRQEFVELWEANVHRPLAVRNHVIASVCPQVFGLFTVKLAILLTLIGGVTETDPRGMRRRGTPHLLVVGDPGCGKSQFLRFAAKLSPRSVLTTGVGTTSAGLTCSAVKDGGEWMLEAGALVLADRGLCCIDEFSAIREHDRATIHEAGLLSMSHFLSPLFR*VG*LGRYETAGAGGQGLHPAGSAGGVQQAPFETTTMMSYVSLGGASTPSAAVERP*LHAAFVHGQNPTIASLRAPQPGLLLPSVSTLASCSARDQAMEQQTLSVAKAGLVCKLNARTTVFAVTNTKGTYDAAEDMTVNTAIGSPLLSRFDLVLLLLDTKNK 1224
            RSMVILLQDDLVDSCKAGDDVVVVGELLRRWMPVFEGVRCDVQVTLRANSVTVQSGADQGSSQ                  VSEELRQEFVELWEAN HRPLAVRNHVIASVCPQVFGLFTVKLAILLTLIGGVTETDPRGMRRRGTPHLLVVGDPGCGKSQFLRFAAKLSPRSVLTTGVGTTSAGLTCSAVKDGGEWMLEAGALVLADRGLCCIDEFSAIREHDRATIHEA                                                                                                               MEQQTLSVAKAGLVCKLNARTTVFAVTNTKGTYDAAEDMTVNTAIGSPLLSRFDLVLLLLDTKNK
Sbjct:  224 RSMVILLQDDLVDSCKAGDDVVVVGELLRRWMPVFEGVRCDVQVTLRANSVTVQSGADQGSSQ------------------VSEELRQEFVELWEANTHRPLAVRNHVIASVCPQVFGLFTVKLAILLTLIGGVTETDPRGMRRRGTPHLLVVGDPGCGKSQFLRFAAKLSPRSVLTTGVGTTSAGLTCSAVKDGGEWMLEAGALVLADRGLCCIDEFSAIREHDRATIHEA---------------------------------------------------------------------------------------------------------------MEQQTLSVAKAGLVCKLNARTTVFAVTNTKGTYDAAEDMTVNTAIGSPLLSRFDLVLLLLDTKNK 502
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BLAST of mRNA_Ecto-sp13_S_contig13739.2938.1 vs. uniprot
Match: A0A835Z090_9STRA (MCM2/3/5 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z090_9STRA)

HSP 1 Score: 351 bits (901), Expect = 1.150e-108
Identity = 215/433 (49.65%), Postives = 241/433 (55.66%), Query Frame = 1 
Query:    1 RSMVILLQDDLVDSCKAGDDVVVVGELLRRWMPVFEGVRCDVQVTLRANSVTVQSGADQGSSQASKLSLSTRSSNSLPPWRVSEELRQEFVELWEANVHRPLA--------------------------VRNHVIASVCPQVFGLFTVKLAILLTLIGGVTETDPRGMRRRGTPHLLVVGDPGCGKSQFLRFAAKLSPRSVLTTGVGTTSAGLTCSAVKDGGEWMLEAGALVLADRGLCCIDEFSAIREHDRATIHEAGLLSMSHFLSPLFR*VG*LGRYETAGAGGQGLHPAGSAGGVQQAPFETTTMMSYVSLGGASTPSAAVERP*LHAAFVHGQNPTIASLRAPQPGLLLPSVSTLASCSARDQAMEQQTLSVAKAGLVCKLNARTTVFAVTNTKGTYDAAEDMTVNTAIGSPLLSRFDLVLLLLDTKN 1221
            RS+V +L+DDLVD+CKAGDDV + G LLRRW PV    RC+V+VTL AN V V + AD                 S+   +VS+EL+ EF +L   +     A                          +RN ++AS+CPQ++GLF VKLA+LLTLIGGVTETD RGMRRRGT HLL++GDPGCGKSQFLRFAAKLSPRSVLTTGVGTTSAGLTC+AVKDGGEWMLEAGALVLADRGLCCIDEFSAIREHDRATIHEA                                                                                                               MEQQTLSVAKAGLVCKLN RT VFAVTN KGTYD  E +T NTAIGSPLLSRFDLVLLLLDTK+
Sbjct:  362 RSIVAVLRDDLVDTCKAGDDVTITGTLLRRWRPVCPDARCNVEVTLLANGVQVNNSAD-----------------SVTGCQVSDELKAEFEQLGAQHASTLYARRGSVXXXXXXXXXXXXXXXXXXXXXLRNTLVASICPQIYGLFAVKLAVLLTLIGGVTETDSRGMRRRGTSHLLLIGDPGCGKSQFLRFAAKLSPRSVLTTGVGTTSAGLTCTAVKDGGEWMLEAGALVLADRGLCCIDEFSAIREHDRATIHEA---------------------------------------------------------------------------------------------------------------MEQQTLSVAKAGLVCKLNTRTCVFAVTNPKGTYDMDESVTSNTAIGSPLLSRFDLVLLLLDTKD 666
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BLAST of mRNA_Ecto-sp13_S_contig13739.2938.1 vs. uniprot
Match: A0A7S2WCY2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCY2_9STRA)

HSP 1 Score: 337 bits (865), Expect = 1.600e-104
Identity = 201/409 (49.14%), Postives = 234/409 (57.21%), Query Frame = 1 
Query:    1 RSMVILLQDDLVDSCKAGDDVVVVGELLRRWMPVFEGVRCDVQVTLRANSVTVQSGADQGSSQASKLSLSTRSSNSLPPWRVSEELRQEFVELWEA--NVHRPLAVRNHVIASVCPQVFGLFTVKLAILLTLIGGVTETDPRGMRRRGTPHLLVVGDPGCGKSQFLRFAAKLSPRSVLTTGVGTTSAGLTCSAVKDGGEWMLEAGALVLADRGLCCIDEFSAIREHDRATIHEAGLLSMSHFLSPLFR*VG*LGRYETAGAGGQGLHPAGSAGGVQQAPFETTTMMSYVSLGGASTPSAAVERP*LHAAFVHGQNPTIASLRAPQPGLLLPSVSTLASCSARDQAMEQQTLSVAKAGLVCKLNARTTVFAVTNTKGTYDAAEDMTVNTAIGSPLLSRFDLVLLLLDTKN 1221
            RS+V+LL+ DLVD CKAGDDV+VVG LLRRW PV   VRC +++ LRA S+ V                   +++ +    VS EL+QEF+++W+   +   PLA RN V+ +VCPQ++GLFTVKL++LLTLIGGV    P GM  R   HLL+VGDPG GKSQFLRFAAKLSPRSVLTTGVGTTSAGLTCSAVKD GEW LEAGALVLADRG+CCIDEFS+IREHDRATIHEA                                                                                                               MEQQTLSVAKAGLVCKLNAR TV AVTN KGTYD +ED++VNTAI SPLLSRFD+VL+LLDT +
Sbjct:  267 RSIVVLLEHDLVDKCKAGDDVIVVGRLLRRWRPVVREVRCKIELVLRATSLRV-----------------CNATSGVAALGVSRELQQEFIQMWDMARSNSTPLAARNVVVRAVCPQIYGLFTVKLSLLLTLIGGVERQAPSGMHVRAASHLLLVGDPGTGKSQFLRFAAKLSPRSVLTTGVGTTSAGLTCSAVKDAGEWNLEAGALVLADRGVCCIDEFSSIREHDRATIHEA---------------------------------------------------------------------------------------------------------------MEQQTLSVAKAGLVCKLNARATVIAVTNPKGTYDMSEDISVNTAIASPLLSRFDIVLVLLDTSH 547
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BLAST of mRNA_Ecto-sp13_S_contig13739.2938.1 vs. uniprot
Match: A0A662XSS9_9STRA (MCM domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XSS9_9STRA)

HSP 1 Score: 333 bits (853), Expect = 3.840e-104
Identity = 192/407 (47.17%), Postives = 234/407 (57.49%), Query Frame = 1 
Query:    1 RSMVILLQDDLVDSCKAGDDVVVVGELLRRWMPVFEGVRCDVQVTLRANSVTVQSGADQGSSQASKLSLSTRSSNSLPPWRVSEELRQEFVELWEANVHRPLAVRNHVIASVCPQVFGLFTVKLAILLTLIGGVTETDPRGMRRRGTPHLLVVGDPGCGKSQFLRFAAKLSPRSVLTTGVGTTSAGLTCSAVKDGGEWMLEAGALVLADRGLCCIDEFSAIREHDRATIHEAGLLSMSHFLSPLFR*VG*LGRYETAGAGGQGLHPAGSAGGVQQAPFETTTMMSYVSLGGASTPSAAVERP*LHAAFVHGQNPTIASLRAPQPGLLLPSVSTLASCSARDQAMEQQTLSVAKAGLVCKLNARTTVFAVTNTKGTYDAAEDMTVNTAIGSPLLSRFDLVLLLLDTKN 1221
            RS++++L+DDLVDS KAGD VVVVG L+R WMP   GVRCD++ T++ANS+ +++     SSQ                  V+EELR EF + W  +   P+  RN +IAS+CP+V+GLF VKLA+ LT+IGGV+  D  GM+ RG PH+L++GDPG GKSQFLRF A+LSPRSVLTTG+GTTSAGLTC+AVKDGGEWMLEAGALVLADRG+CCIDEFS+IR +DR +IHEA                                                                                                               MEQQTLSVAKAGLVCKLNARTT+FAVTN KG YD A D++VNT+I SPLLSRFDL+L+LLD  N
Sbjct:   70 RSILVVLEDDLVDSVKAGDQVVVVGILMRTWMPCVRGVRCDLETTVKANSIRIKNAT---SSQV----------------LVTEELRAEFAQFWAKHKRDPVRGRNEIIASICPKVYGLFIVKLAVALTVIGGVSHVDETGMKTRGEPHMLLIGDPGTGKSQFLRFTAELSPRSVLTTGIGTTSAGLTCTAVKDGGEWMLEAGALVLADRGVCCIDEFSSIRSNDRTSIHEA---------------------------------------------------------------------------------------------------------------MEQQTLSVAKAGLVCKLNARTTIFAVTNPKGRYDPAADVSVNTSIASPLLSRFDLILVLLDRMN 346
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BLAST of mRNA_Ecto-sp13_S_contig13739.2938.1 vs. uniprot
Match: A0A0P1B2I4_PLAHL (Dna replication licensing factor mcm9 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B2I4_PLAHL)

HSP 1 Score: 329 bits (844), Expect = 3.840e-102
Identity = 185/407 (45.45%), Postives = 232/407 (57.00%), Query Frame = 1 
Query:    1 RSMVILLQDDLVDSCKAGDDVVVVGELLRRWMPVFEGVRCDVQVTLRANSVTVQSGADQGSSQASKLSLSTRSSNSLPPWRVSEELRQEFVELWEANVHRPLAVRNHVIASVCPQVFGLFTVKLAILLTLIGGVTETDPRGMRRRGTPHLLVVGDPGCGKSQFLRFAAKLSPRSVLTTGVGTTSAGLTCSAVKDGGEWMLEAGALVLADRGLCCIDEFSAIREHDRATIHEAGLLSMSHFLSPLFR*VG*LGRYETAGAGGQGLHPAGSAGGVQQAPFETTTMMSYVSLGGASTPSAAVERP*LHAAFVHGQNPTIASLRAPQPGLLLPSVSTLASCSARDQAMEQQTLSVAKAGLVCKLNARTTVFAVTNTKGTYDAAEDMTVNTAIGSPLLSRFDLVLLLLDTKN 1221
            RS++++L+DDLVDS KAGD V+VVG L+R W P  +G+RCD++ T++ANS+ +++                      P   V+EELR EF + W  + H  +  RN ++AS+CP+V+GLF VKLA+ LT+IGG++  D  GM+ RG PHLL++GDPG GKSQFLRF A+LSPRSVLTTG+GTTSAGLTC+AVKDGGEWMLEAGALVLADRG+CCIDEFS+IR +DR +IHEA                                                                                                               MEQQTLSVAKAGLVCKLNARTT+FAVTN KG +D   D++VNT+I SPLLSRFDLVL+LLD +N
Sbjct:  233 RSILVVLEDDLVDSVKAGDHVIVVGILMRMWKPCVKGIRCDLETTIKANSIRIKNAT-------------------APQVLVTEELRAEFTQFWSKHKHDAIRGRNEIVASICPKVYGLFIVKLAVALTVIGGISSVDNSGMKTRGEPHLLLIGDPGTGKSQFLRFTAELSPRSVLTTGIGTTSAGLTCTAVKDGGEWMLEAGALVLADRGVCCIDEFSSIRSNDRTSIHEA---------------------------------------------------------------------------------------------------------------MEQQTLSVAKAGLVCKLNARTTIFAVTNPKGRFDPTMDISVNTSIASPLLSRFDLVLVLLDRRN 509
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BLAST of mRNA_Ecto-sp13_S_contig13739.2938.1 vs. uniprot
Match: A0A662YGP8_9STRA (MCM domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YGP8_9STRA)

HSP 1 Score: 330 bits (846), Expect = 3.000e-101
Identity = 190/407 (46.68%), Postives = 233/407 (57.25%), Query Frame = 1 
Query:    1 RSMVILLQDDLVDSCKAGDDVVVVGELLRRWMPVFEGVRCDVQVTLRANSVTVQSGADQGSSQASKLSLSTRSSNSLPPWRVSEELRQEFVELWEANVHRPLAVRNHVIASVCPQVFGLFTVKLAILLTLIGGVTETDPRGMRRRGTPHLLVVGDPGCGKSQFLRFAAKLSPRSVLTTGVGTTSAGLTCSAVKDGGEWMLEAGALVLADRGLCCIDEFSAIREHDRATIHEAGLLSMSHFLSPLFR*VG*LGRYETAGAGGQGLHPAGSAGGVQQAPFETTTMMSYVSLGGASTPSAAVERP*LHAAFVHGQNPTIASLRAPQPGLLLPSVSTLASCSARDQAMEQQTLSVAKAGLVCKLNARTTVFAVTNTKGTYDAAEDMTVNTAIGSPLLSRFDLVLLLLDTKN 1221
            RS++++L+DDLVDS KAGD VVVVG L+R WMP   GVRCD++ T++ANS+ +++     SSQ                  V+EELR EF + W  +   P+  RN +IAS+CP+V+GLF VKLA+ LT+IGGV+  D  GM+ RG PH+L++GDPG GKSQFLRF A+LSPRSVLTTG+GTTSAGLTC+AVKDGG+WMLEAGALVLADRG+CCIDEFS+IR +DR +IHEA                                                                                                               MEQQTLSVAKAGLVCKLNARTT+FAVTN KG YD   D++VNT+I SPLLSRFDL+L+LLD  N
Sbjct:  270 RSILVVLEDDLVDSVKAGDQVVVVGILMRTWMPCVRGVRCDLETTVKANSIRIKNAT---SSQV----------------LVTEELRTEFAQFWAKHKRDPVRGRNEIIASICPKVYGLFIVKLAVALTVIGGVSHVDETGMKTRGEPHMLLIGDPGTGKSQFLRFTAELSPRSVLTTGIGTTSAGLTCTAVKDGGDWMLEAGALVLADRGVCCIDEFSSIRSNDRTSIHEA---------------------------------------------------------------------------------------------------------------MEQQTLSVAKAGLVCKLNARTTIFAVTNPKGRYDPTADVSVNTSIASPLLSRFDLILVLLDRMN 546
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BLAST of mRNA_Ecto-sp13_S_contig13739.2938.1 vs. uniprot
Match: A0A421FE45_9STRA (MCM domain-containing protein (Fragment) n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FE45_9STRA)

HSP 1 Score: 322 bits (825), Expect = 4.640e-101
Identity = 185/404 (45.79%), Postives = 230/404 (56.93%), Query Frame = 1 
Query:    1 RSMVILLQDDLVDSCKAGDDVVVVGELLRRWMPVFEGVRCDVQVTLRANSVTVQSGADQGSSQASKLSLSTRSSNSLPPWRVSEELRQEFVELWEANVHRPLAVRNHVIASVCPQVFGLFTVKLAILLTLIGGVTETDPRGMRRRGTPHLLVVGDPGCGKSQFLRFAAKLSPRSVLTTGVGTTSAGLTCSAVKDGGEWMLEAGALVLADRGLCCIDEFSAIREHDRATIHEAGLLSMSHFLSPLFR*VG*LGRYETAGAGGQGLHPAGSAGGVQQAPFETTTMMSYVSLGGASTPSAAVERP*LHAAFVHGQNPTIASLRAPQPGLLLPSVSTLASCSARDQAMEQQTLSVAKAGLVCKLNARTTVFAVTNTKGTYDAAEDMTVNTAIGSPLLSRFDLVLLLLD 1212
            RS++++L+DDLVDS KAGD VVVVG L+R W P    VRCD++ T++ANS+ +++     +SQ                  V+EEL+ EF + W  +   P+  RN ++AS+CP+V+GLF VKLA+ LT+IGGV+  D  GM+ RG PH+L++GDPG GKSQFLRF A+LSPRSVLTTG+GTTSAGLTC+AVKDGGEWMLEAGALVLADRG+CCIDEFS+IR +DR +IHEA                                                                                                               MEQQTLSVAKAGLVCKLNARTT+FAVTN KG YD   D++VNT+I SPLLSRFDL+L+LLD
Sbjct:   91 RSILVVLEDDLVDSVKAGDQVVVVGILMRTWQPCIRSVRCDLETTIKANSIRIKNAT---TSQV----------------LVTEELQAEFAQFWAKHKRCPMRGRNEIVASICPKVYGLFIVKLAVALTIIGGVSYVDETGMKTRGEPHMLLIGDPGTGKSQFLRFIAELSPRSVLTTGIGTTSAGLTCTAVKDGGEWMLEAGALVLADRGVCCIDEFSSIRSNDRTSIHEA---------------------------------------------------------------------------------------------------------------MEQQTLSVAKAGLVCKLNARTTIFAVTNPKGRYDPTADVSVNTSIASPLLSRFDLILVLLD 364
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BLAST of mRNA_Ecto-sp13_S_contig13739.2938.1 vs. uniprot
Match: A0A2P4Y5F4_9STRA (DNA replication licensing factor MCM9 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y5F4_9STRA)

HSP 1 Score: 327 bits (838), Expect = 6.740e-101
Identity = 188/407 (46.19%), Postives = 233/407 (57.25%), Query Frame = 1 
Query:    1 RSMVILLQDDLVDSCKAGDDVVVVGELLRRWMPVFEGVRCDVQVTLRANSVTVQSGADQGSSQASKLSLSTRSSNSLPPWRVSEELRQEFVELWEANVHRPLAVRNHVIASVCPQVFGLFTVKLAILLTLIGGVTETDPRGMRRRGTPHLLVVGDPGCGKSQFLRFAAKLSPRSVLTTGVGTTSAGLTCSAVKDGGEWMLEAGALVLADRGLCCIDEFSAIREHDRATIHEAGLLSMSHFLSPLFR*VG*LGRYETAGAGGQGLHPAGSAGGVQQAPFETTTMMSYVSLGGASTPSAAVERP*LHAAFVHGQNPTIASLRAPQPGLLLPSVSTLASCSARDQAMEQQTLSVAKAGLVCKLNARTTVFAVTNTKGTYDAAEDMTVNTAIGSPLLSRFDLVLLLLDTKN 1221
            RS++++L+DDLVDS KAGD VVVVG L+R W P   GVRCD++ T++ANS+ +++ +   +SQ                  V+EELR EF + W  +   P+  RN ++AS+CP+V+GLF VKLA+ LT+IGGV+  D  GM+ RG PH+L++GDPG GKSQFLRF A+LSPRSVLTTG+GTTSAGLTC+AVKDGGEWMLEAGALVLADRG+CCIDEFS+IR +DR +IHEA                                                                                                               MEQQTLSVAKAGLVCKLNARTT+FAVTN KG YD   D++VNT+I SPLLSRFDL+L+LLD  N
Sbjct:  456 RSILVVLEDDLVDSVKAGDQVVVVGILMRTWKPCVRGVRCDLETTIKANSIRIKNAS---TSQVF----------------VTEELRAEFTQFWAKHKRDPVRGRNEIVASICPKVYGLFIVKLAVALTVIGGVSYVDDTGMKTRGEPHMLLIGDPGTGKSQFLRFTAELSPRSVLTTGIGTTSAGLTCTAVKDGGEWMLEAGALVLADRGVCCIDEFSSIRSNDRTSIHEA---------------------------------------------------------------------------------------------------------------MEQQTLSVAKAGLVCKLNARTTIFAVTNPKGRYDPTTDVSVNTSIASPLLSRFDLILVLLDRMN 732
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BLAST of mRNA_Ecto-sp13_S_contig13739.2938.1 vs. uniprot
Match: W2R1E5_PHYPN (MCM domain-containing protein n=25 Tax=Phytophthora TaxID=4783 RepID=W2R1E5_PHYPN)

HSP 1 Score: 327 bits (838), Expect = 1.290e-100
Identity = 188/407 (46.19%), Postives = 232/407 (57.00%), Query Frame = 1 
Query:    1 RSMVILLQDDLVDSCKAGDDVVVVGELLRRWMPVFEGVRCDVQVTLRANSVTVQSGADQGSSQASKLSLSTRSSNSLPPWRVSEELRQEFVELWEANVHRPLAVRNHVIASVCPQVFGLFTVKLAILLTLIGGVTETDPRGMRRRGTPHLLVVGDPGCGKSQFLRFAAKLSPRSVLTTGVGTTSAGLTCSAVKDGGEWMLEAGALVLADRGLCCIDEFSAIREHDRATIHEAGLLSMSHFLSPLFR*VG*LGRYETAGAGGQGLHPAGSAGGVQQAPFETTTMMSYVSLGGASTPSAAVERP*LHAAFVHGQNPTIASLRAPQPGLLLPSVSTLASCSARDQAMEQQTLSVAKAGLVCKLNARTTVFAVTNTKGTYDAAEDMTVNTAIGSPLLSRFDLVLLLLDTKN 1221
            RS++++L+DDLVDS KAGD VVVVG L+R W P   GVRCD++ T+ ANS+ +++ +   +SQ                  V+EELR EF + W  +   P+  RN ++AS+CP+V+GLF VKLA+ LT+IGGV+  D  GM+ RG PH+L++GDPG GKSQFLRF A+LSPRSVLTTG+GTTSAGLTC+AVKDGGEWMLEAGALVLADRG+CCIDEFS+IR +DR +IHEA                                                                                                               MEQQTLSVAKAGLVCKLNARTT+FAVTN KG YD   D++VNT+I SPLLSRFDL+L+LLD  N
Sbjct:  262 RSILVVLEDDLVDSVKAGDQVVVVGILMRTWKPCVRGVRCDLETTINANSIRIKNAS---TSQV----------------MVTEELRAEFAQFWTKHKRDPVRGRNEIVASICPKVYGLFIVKLAVALTVIGGVSYVDETGMKTRGEPHMLLIGDPGTGKSQFLRFTAELSPRSVLTTGIGTTSAGLTCTAVKDGGEWMLEAGALVLADRGVCCIDEFSSIRSNDRTSIHEA---------------------------------------------------------------------------------------------------------------MEQQTLSVAKAGLVCKLNARTTIFAVTNPKGRYDPTTDVSVNTSIASPLLSRFDLILVLLDRMN 538
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BLAST of mRNA_Ecto-sp13_S_contig13739.2938.1 vs. uniprot
Match: A0A8K1FHI9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHI9_PYTOL)

HSP 1 Score: 330 bits (847), Expect = 2.360e-100
Identity = 194/409 (47.43%), Postives = 237/409 (57.95%), Query Frame = 1 
Query:    1 RSMVILLQDDLVDSCKAGDDVVVVGELLRRWMPVFEGVRCDVQVTLRANSVTVQSGADQGSSQASKLSLSTRSSNSLPPWRVSEELRQEFVELWEANVHR--PLAVRNHVIASVCPQVFGLFTVKLAILLTLIGGVTETDPRGMRRRGTPHLLVVGDPGCGKSQFLRFAAKLSPRSVLTTGVGTTSAGLTCSAVKDGGEWMLEAGALVLADRGLCCIDEFSAIREHDRATIHEAGLLSMSHFLSPLFR*VG*LGRYETAGAGGQGLHPAGSAGGVQQAPFETTTMMSYVSLGGASTPSAAVERP*LHAAFVHGQNPTIASLRAPQPGLLLPSVSTLASCSARDQAMEQQTLSVAKAGLVCKLNARTTVFAVTNTKGTYDAAEDMTVNTAIGSPLLSRFDLVLLLLDTKN 1221
            RS++++L+DDLVDS KAGD VVVVG L+R W P  + VRCD++  +RANS+ +Q+ +               S+N L    V+EEL++EF   W+   HR  PL  RN +IAS+CP+V+GLF VKLA+ LT+IGGV+  D  GM+ RG PH+L++GDPG GKSQFLRFAA+LSPRSVLTTG+GTTSAGLTC+AVKDGGEWMLEAGALVLADRG+CCIDEFS+IR HDR +IHEA                                                                                                               MEQQTLSVAKAGLVCKLNARTT+FAVTN KG YD   D++VNT+I SPLLSRFDL+L+LLD +N
Sbjct:  269 RSILVVLEDDLVDSVKAGDHVVVVGVLMRSWKPCIKDVRCDLETIVRANSIRIQNAS---------------SANVL----VTEELKKEFATFWQEK-HRDDPLRGRNEIIASICPKVYGLFVVKLALALTIIGGVSHVDATGMKTRGEPHMLLIGDPGTGKSQFLRFAAELSPRSVLTTGIGTTSAGLTCTAVKDGGEWMLEAGALVLADRGVCCIDEFSSIRSHDRTSIHEA---------------------------------------------------------------------------------------------------------------MEQQTLSVAKAGLVCKLNARTTIFAVTNPKGRYDPNADVSVNTSIASPLLSRFDLILVLLDRRN 546
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13739.2938.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM73_ECTSI3.860e-16068.14MCM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835Z090_9STRA1.150e-10849.65MCM2/3/5 family-domain-containing protein n=1 Tax=... [more]
A0A7S2WCY2_9STRA1.600e-10449.14Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A662XSS9_9STRA3.840e-10447.17MCM domain-containing protein n=1 Tax=Nothophytoph... [more]
A0A0P1B2I4_PLAHL3.840e-10245.45Dna replication licensing factor mcm9 n=1 Tax=Plas... [more]
A0A662YGP8_9STRA3.000e-10146.68MCM domain-containing protein n=1 Tax=Nothophytoph... [more]
A0A421FE45_9STRA4.640e-10145.79MCM domain-containing protein (Fragment) n=3 Tax=P... [more]
A0A2P4Y5F4_9STRA6.740e-10146.19DNA replication licensing factor MCM9 n=1 Tax=Phyt... [more]
W2R1E5_PHYPN1.290e-10046.19MCM domain-containing protein n=25 Tax=Phytophthor... [more]
A0A8K1FHI9_PYTOL2.360e-10047.43Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13739contigEcto-sp13_S_contig13739:213..4167 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score123.6
Seed ortholog evalue3.3e-26
Seed eggNOG ortholog2880.D8LM73
Preferred nameMCM9
Model size1224
KEGG koko:K10738
Hectar predicted targeting categoryother localisation
GOsGO:0000724,GO:0000725,GO:0005575,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0032991,GO:0033554,GO:0034641,GO:0042555,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097362,GO:1901360
Exons7
EggNOG free text desc.DNA replication initiation
EggNOG OGsCOG1241@1,KOG0477@2759
EC3.6.4.12
Cds size195
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03032
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13739.2938.1prot_Ecto-sp13_S_contig13739.2938.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13739 213..698 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462733.2056286-CDS-Ecto-sp13_S_contig13739:212..3171681462733.2056286-CDS-Ecto-sp13_S_contig13739:212..317Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13739 213..317 -
1681462733.2184165-CDS-Ecto-sp13_S_contig13739:608..6981681462733.2184165-CDS-Ecto-sp13_S_contig13739:608..698Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13739 609..698 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462733.2310882-UTR-Ecto-sp13_S_contig13739:698..11481681462733.2310882-UTR-Ecto-sp13_S_contig13739:698..1148Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig13739 699..1148 -
1681462733.2466624-UTR-Ecto-sp13_S_contig13739:1578..16971681462733.2466624-UTR-Ecto-sp13_S_contig13739:1578..1697Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig13739 1579..1697 -
1681462733.2584336-UTR-Ecto-sp13_S_contig13739:2308..23991681462733.2584336-UTR-Ecto-sp13_S_contig13739:2308..2399Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig13739 2309..2399 -
1681462733.2719483-UTR-Ecto-sp13_S_contig13739:3020..31461681462733.2719483-UTR-Ecto-sp13_S_contig13739:3020..3146Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig13739 3021..3146 -
1681462733.2808561-UTR-Ecto-sp13_S_contig13739:3794..39741681462733.2808561-UTR-Ecto-sp13_S_contig13739:3794..3974Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig13739 3795..3974 -
1681462733.2894225-UTR-Ecto-sp13_S_contig13739:4104..41671681462733.2894225-UTR-Ecto-sp13_S_contig13739:4104..4167Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig13739 4105..4167 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13739.2938.1

>prot_Ecto-sp13_S_contig13739.2938.1 ID=prot_Ecto-sp13_S_contig13739.2938.1|Name=mRNA_Ecto-sp13_S_contig13739.2938.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=65bp
MEQQTLSVAKAGLVCKLNARTTVFAVTNTKGTYDAAEDMTVNTAIGSPLL
SRFDLVLLLLDTKNK
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mRNA from alignment at Ecto-sp13_S_contig13739:213..4167-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13739.2938.1 ID=mRNA_Ecto-sp13_S_contig13739.2938.1|Name=mRNA_Ecto-sp13_S_contig13739.2938.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3955bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13739:213..4167- (Ectocarpus species13 EcNAP12_S_4_19m)
AGGTCCATGGTGATTCTTCTGCAGGACGATCTGGTGGACTCTTGCAAGGC
CGGGGATGATGTGGTGAGTAAACTAGGGGGGGGGCGGGGGCGCAGCTACA
CACTTGAAGTGTTGCGAGATTCTTCGGTGCAAAGACTGGTGTGACCATGA
ATGCCAACGAATCCCCCCCCTCCCACCCTGTGCCGCCCGTGAGGTGGTCG
TGGGAGAGCTATTGCGGAGATGGATGCCGGTGTTCGAGGGGGTACGCTGC
GACGTCCAGGTCACGCTCCGTGCGAACAGCGTCACGGTCCAGAGCGGCGC
GGACCAAGGCAGCTCGCAGGCGAGCAAGCTTTCATTAAGTACTCGATCGA
GCAACTCCCTCCCCCCCTGGCGCGTTTTCTTCTGTATTCACGATAGACCA
AGTTGCTTGATGGACTCTCCCCGCTGATGCTCCGCACTGCAGGTGTAGTA
AATTTTCCTCCTGCGCGGTACAGCTGTGGACTCAAGTGTGTGGTACAGGC
GTTGGTGCAGTTGCAACTAGGCCGTACTCAGGCTGGCGCGCGCGGTTGCG
CGCTGTGGTGAGCAGGGAGCCCAAGGCATGGCTGTCTGGCAAACATGAGG
CGTGGCGCTGCTCTTGTTCTTCGGACGTTCGCTTGGACAGTCCCGCGAAT
GGCGGTTGAGTCACTACCAATCCCTGTCGCAGAGGAGGCTGCCTGCTTGA
CTCTGTGTTCAGAAAAGTGTGGGCGATCTTGGGTAGGTAACGGAGGGTTG
AATCACGGCCGTTCGACGTTCCTGCCGCTTGATTGGTCATCGGTTGGGTC
ATGCTCGGCACGATTCTACCGCTTGGGTCATCGCATACGTTTTCTGTGCA
CAACCTTTCACGTTGCTGTGCACGTGCCGCAAGAACCTGTTGTGCTCGGA
CATGTGAGCCTTGTCGCATGGCGAGTATGCTGCGACGGCAGTGCGTCCAT
TTTCGTGTGTTTTGCTTATGGACGCACCATGGTCCCCTTCATACTCTCGC
CTGACCCTTAATAACGTGCAGGTGAGCGAGGAGCTTCGGCAGGAGTTCGT
GGAACTGTGGGAGGCGAACGTCCACCGCCCGCTCGCCGTCCGCAACCACG
TCATCGCAAGCGTTTGCCCTCAAGTCTTTGGACTGTTCACCGTTAAGGTA
ACCCCTCCCCGACAGAAAGTGCCGCCTATTGTTGATGCTGAGTACCATGC
ACTCCTTTCAATCTTGTTGCGGAAGGAGGATCCGTTGCCGTCAGCGTTTT
TTTGCGAAGGCTTCCCAGGGTTTTGCGGGAAATTCTTGCATGCAGTAGCA
ATTTTCATCACGCTGGTTTTGTTCGGTTTTCGTTTCGTTCAGGGGGGCGT
TGCTTGGCTTGTTCGATGCTTCCGGTATTGATGTGTTCGATCGTGTGGTG
GACTGAGTCCGCGCCCCCGCGTCCGGCTTGTGGTGCCGTGGTTGTCCGAG
TACTTGAACATGACGAAAACGTGAGTAAGTAAACGCACAGCATCACCTCC
AACTGTATAGGCCACATTCAAACCGACGGTACCGCTATGTACCCCTTCCC
CCCCGCGTCACGCCCGCGAACCCTTACGCCCCATCCTCTCCCGGTGGGCG
TGTTTCTGCTACCTTTTTTTCCCCTTTTCTTGTCGTTCTCTTGTCGTTCC
CTCTCGTGATACTGTAAACCCAGCTCGCGATCCTGTTGAGGCCTGCTTTC
ATTCACGTTTTTGCTTGTTTTCCTGCTGTCCTCTTTTTTGTTTTCTCCCA
CGATGCTGGAAAACCCAGCTCGCGATCCTGCTGACCCTGATCGGGGGAGT
CACCGAGACCGATCCAAGAGGAATGAGACGCAGAGGCACGCCGCACCTTT
TGGTCGTCGGTGAGTTGCGGGTCTGCGAGAGAAGCGCAGAACACGCGAGA
AAAGCGTTGCATAGAACGGAAGGAATCTGAAGAGAGACCAAGAGGCGCTG
CCAACCGCTCGCGTCCTATCGTGTCGTTTCGTACCATTTTTTCTTTTTTT
CTTTTGGCGTGAGGAGATGCACACGCGCCCGGCAGTCGACTAGGCAAAGC
AGGCAAAATATTATACCAGTAGTCTCGACTATATTTTGTTGTCACGACTA
TTGTCGCTTGTGGTTGTTTGAGTTTGGGGGAGCGAGTATTGTAGCGTATG
TGTGTGTGCTTCCGAACGTCCCGCCACGAGCCTCCAATCCCAGCATGTGT
TAGTATTACTTTTGAGCAAGCTCTGAGTCCCAAAAACACCGTTACTTCGT
GGAGAGTTTCCACAGAATATCGAAACGGGACAATGCTTCACGGAGGCACG
GCGAATTCTTCTCGTCAATCGATCTCTCGTAGCGCTTCTCATGCCCAGAA
ACTAGACCCAATACTTCTGGAACAGTCTATCTGCTCCGGGTGTATGGTTT
GTCCCCCCGGGATTTCGATGGCATACGCATGTTTCGGTGTAGATTTCAAC
TGAAGCTTCCTCTTGCGCAGGTGACCCGGGGTGCGGGAAGAGCCAGTTCC
TGCGATTCGCGGCGAAACTTAGCCCTCGGTCTGTGCTGACGACCGGTGTG
GGGACGACCAGCGCAGGGCTCACGTGCTCCGCTGTGAAGGTAAGCTGAGG
GGCGCGTTTGGCCGTGTGCGTCTGCGCCGCTTTTGTGTTTTCCTGCTACC
ACTAACGGCATCGTTGCCTATTGATGGCCATGTTGACGTTGCTGGTTTTC
CTGTTGTTTTTGTTTGTGGTGGCGTTGGTTTTGTCGTGGTCGTCACTATC
AATGCCGTTGTTACCGCCGTCGTGTTGGCATTGAGAAACGCCGAGACATT
TTCTTTGTCCAGGGAAGCCGCGTCTTCTGGTGGTTTTGAAAGTGTTTTGG
CAGCTGCAATCAAACAAGACCTCACCGTGTCATGAACTTCGCATCACAAA
AACATTAGACGACACCATCAGCCCGCACTTGCAATATTTTCCGGGAACTC
CTCTTTTATCACGGCGCCCCGCCGTGCTCAACCTTCACCACCCACCGTCA
TGATGCTGTACCATGGAAGGATGGCGGGGAGTGGATGCTCGAGGCCGGCG
CGCTTGTCCTGGCCGACCGTGGCCTGTGCTGCATCGACGAGTTTTCCGCC
ATTCGAGAACATGATCGCGCCACCATCCACGAGGCAGGTTTGCTCTCGAT
GAGCCACTTTCTTTCACCGCTCTTTCGTTGAGTTGGTTGACTTGGGAGGT
ACGAGACAGCGGGTGCAGGTGGCCAGGGTTTACACCCCGCGGGCTCGGCT
GGTGGGGTTCAGCAGGCCCCTTTTGAGACCACGACCATGATGTCATACGT
TTCGCTAGGTGGGGCGAGCACGCCAAGCGCTGCGGTCGAACGGCCTTAAT
TGCACGCCGCTTTCGTGCACGGACAAAACCCTACCATCGCTTCGCTTCGC
GCCCCTCAACCAGGTCTGCTGTTGCCGTCTGTCTCAACGCTCGCGTCTTG
TTCTGCCCGTGACCAGGCCATGGAGCAGCAGACGCTGAGCGTGGCCAAGG
CCGGCCTGGTGTGCAAGCTCAACGCCAGGACGACCGTCTTTGCGGTCACG
AACACCAAGGTACGGTGCACGCTTTACTTCCGTTTGGCGAAAAGTGTCTT
CCAAACCTGAGAATAACACAAAGCCGCTCTTTCCTTCGGCAGGACGATGG
TATCACGTGCGAATGTAGGCGTCGATATCGCGATATTGCTGCGGCGGAAA
CGGTAAATCTTCGTAGCAGGCCCTAACAAGTGTTTAGGTTGTTTTGCCAG
GGGCTATAGGTCGTCTTCAGTGTTACACATCGCTCTTTAGTGTACATAGC
AAAACGCGTATCCCCCCTCCCGCTCCGAACGCTGTAAACTGCGAAAGTAG
GGAACGTACGACGCGGCGGAGGACATGACAGTCAACACCGCCATCGGAAG
CCCCCTCTTGTCCCGGTTCGACCTCGTGCTACTGCTGCTCGACACAAAGA
ACAAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13739:213..4167-

>mRNA_Ecto-sp13_S_contig13739.2938.1 ID=mRNA_Ecto-sp13_S_contig13739.2938.1|Name=mRNA_Ecto-sp13_S_contig13739.2938.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=195bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13739:213..4167- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAGCAGCAGACGCTGAGCGTGGCCAAGGCCGGCCTGGTGTGCAAGCT
CAACGCCAGGACGACCGTCTTTGCGGTCACGAACACCAAGGGAACGTACG
ACGCGGCGGAGGACATGACAGTCAACACCGCCATCGGAAGCCCCCTCTTG
TCCCGGTTCGACCTCGTGCTACTGCTGCTCGACACAAAGAACAAG
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