prot_Ecto-sp13_S_contig13720.2926.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13720.2926.1
Unique Nameprot_Ecto-sp13_S_contig13720.2926.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length498
Homology
BLAST of mRNA_Ecto-sp13_S_contig13720.2926.1 vs. uniprot
Match: A0A6H5JVQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVQ5_9PHAE)

HSP 1 Score: 581 bits (1498), Expect = 2.160e-200
Identity = 373/570 (65.44%), Postives = 387/570 (67.89%), Query Frame = 0
Query:    1 ATVVGTLSRQGGEEERQERNERKPGRSRETITPMHRKEDEKPSEEFWEHFFREENFQGKTLGDFLNDASPTPTAVKKREAWFDVPHRELFYKEEDLRCFRTNGTYIGDDCDPDDLEEEAAGTEQEPYQESEPPAVSVFFSADDATRVPRRKEAEHTECQEKGEWEEE-GEGRLPGTGSTGYRPAQTPEELCLGAAAFAAASAAYGRPSSS-------------------------GSGS------------------------------------KEDHRTGSSRNVNKSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLAPTSSSLGRAAATKSVLGEIGVANSKDPMHKKLLEFRQKKSSTSAAVAGAGKSKAPTKGKRAVSKTTSVQTVAAIQAKPARGRPASTRGRTNVAS----------VRGSRSASLKGSVTSAAGAPARGMAGTANSTPHGVSLGVSSASIAGGPEAEAKKSVSSSTNVRKXXXXXXXXXXXXXXXXXXXXXXXXXGPKSAREQSTGVKRKGPAVLSSNVTDRTKR 498
            A  VGTL RQGGEEER+ER   K  RS ET TPMHRKEDEKPSEEFWEHFFREENFQGKTLGDFLN+ASP+PTAVKKREAWFDVPHRELFYKEEDLRCFRTNGTYIGDDCDPDDLEEEAAGTEQEP QESEPPAVSV  SADDA RVPRRKE EHTECQE+GEWEEE G GRLPGTGSTG RPAQTPEELCLGAAAFAAASAAYGRPSSS                         GSG                                     K+D  TGSSRNVNKS                                              XXXXXXX VLAPTSSSLGRAA+TK VLGEIGVAN+KDPMH+KLLEFRQKKS+T+ AV GAG SKAPTKGK  VSKTTSV TVAAIQAK ARGRPASTRGRT+ AS          VRGSRSASL+GSV SAAGAPARGMAGTANSTP GVSLGVSSASIAG  EAE KKSV SS NV +                         GPKSARE+ST VKRKGP VLSSNVTDRTKR
Sbjct:   17 AIAVGTLGRQGGEEERKER---KADRSGETTTPMHRKEDEKPSEEFWEHFFREENFQGKTLGDFLNEASPSPTAVKKREAWFDVPHRELFYKEEDLRCFRTNGTYIGDDCDPDDLEEEAAGTEQEPDQESEPPAVSVSSSADDAIRVPRRKEVEHTECQEEGEWEEEEGGGRLPGTGSTGCRPAQTPEELCLGAAAFAAASAAYGRPSSSASTPVAPGGLALPSEGGGGTNGSSEGSGKLPLEGNAGKTRSSGRSXXXXXXXXXXXXXXXXXXXXKKDRPTGSSRNVNKSEGHGGLKQHQKQRHERVGGKRQRSAATGDGGLTEASVGDSSGDDPRXXXXXXXGVLAPTSSSLGRAASTKYVLGEIGVANNKDPMHRKLLEFRQKKSTTATAVPGAGTSKAPTKGKGEVSKTTSVHTVAAIQAKSARGRPASTRGRTSAASAHADAAPRAAVRGSRSASLRGSVASAAGAPARGMAGTANSTPRGVSLGVSSASIAGKAEAEHKKSVFSSANVPRSNPKTVSKPVTTVKRSVSGTGGGVGGPKSARERSTDVKRKGPTVLSSNVTDRTKR 583          
BLAST of mRNA_Ecto-sp13_S_contig13720.2926.1 vs. uniprot
Match: D7G7F5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F5_ECTSI)

HSP 1 Score: 538 bits (1385), Expect = 4.750e-183
Identity = 395/572 (69.06%), Postives = 406/572 (70.98%), Query Frame = 0
Query:    1 ATVVGTLSRQGGEEERQERNERKPGRSRETITPMHRKEDEKPSEEFWEHFFREENFQGKTLGDFLNDASPTPTAVKKREAWFDVPHRELFYKEEDLRCFRTNGTYIGDDCDPDDLEEEAAGTEQEPYQESEPPAVSVFFSADDATRVPRRKEAEHTECQEKGEWEEEGEGRLPGTGSTGYRPAQTPEELCLGAAAFAAASAAYGRPSSS----------------------------------------------------------------GSGSKEDHRTGSSRNVNKSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLAPTSSSLGRAAATKSVLGEIGVANSKDPMHKKLLEFRQKKSSTSAAVAGAGKSKAPTKGKRAVSKTTSVQTVAAIQAKPARGRPASTRGRTNVASVRGSRSASLKGSVTSAAGAPARGMAGTANSTPH----------GVSLGVSSASIAGGPEAEAKKSVSSSTNVRKXXXXXXXXXXXXXXXXXXXXXXXXXGPKSAREQSTGVKRKGPAVLSSNVTDRTKR 498
            A  VGTL RQG EEER    ERKPGRS ET TPMHRKEDEKPSEEFWEHFFREENFQGKTLGDFLNDASPTPTAVKKREAWFDVPHRELFYKEEDLRCFRTNGTYIGDD DPDDLEEEA G+EQEP QESEPP VSV  SADDA RVPRRKEAEHT CQE+GEWEEEGEGRLPGTGST  RPAQTPEELCLGAAAFAAASAAYGRPSSS                                                                GSGSKE H TGSSRNV KSG   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLAPTSSSLGRAAATKSVL EIGVAN+KDPM KKL EFRQKKSST+ AVAGAG SKA TKGKRAVSKTTSVQ+VAA+QAKPARGRPASTRGRT+VAS     +                                     GVSLGVS+ASIAGG EAEAKK+VSSSTNV +                         GPKSAREQSTGVKRKGP VLSSNVTDRTKR
Sbjct:   33 AIAVGTLGRQGREEER---TERKPGRSGETTTPMHRKEDEKPSEEFWEHFFREENFQGKTLGDFLNDASPTPTAVKKREAWFDVPHRELFYKEEDLRCFRTNGTYIGDDWDPDDLEEEAVGSEQEPDQESEPPTVSVSSSADDAIRVPRRKEAEHTGCQEEGEWEEEGEGRLPGTGSTVNRPAQTPEELCLGAAAFAAASAAYGRPSSSSSTPLAPGGLALPSQGGGGTNGSSEGSGNLPVEGNRVGKTRSSGRYRSSTAAASCGRSVNGSSSGSGSKEGHPTGSSRNVKKSGGHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLAPTSSSLGRAAATKSVLDEIGVANNKDPMQKKLREFRQKKSSTATAVAGAGTSKASTKGKRAVSKTTSVQSVAAMQAKPARGRPASTRGRTSVASAHADAAPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVSLGVSTASIAGGAEAEAKKNVSSSTNVPRSNPKTVSKPVTTVKRSVSGNGSGVGGPKSAREQSTGVKRKGPTVLSSNVTDRTKR 601          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13720.2926.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JVQ5_9PHAE2.160e-20065.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7F5_ECTSI4.750e-18369.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13720contigEcto-sp13_S_contig13720:783..3827 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13720.2926.1mRNA_Ecto-sp13_S_contig13720.2926.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13720 783..3827 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13720.2926.1 ID=prot_Ecto-sp13_S_contig13720.2926.1|Name=mRNA_Ecto-sp13_S_contig13720.2926.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=498bp
ATVVGTLSRQGGEEERQERNERKPGRSRETITPMHRKEDEKPSEEFWEHF
FREENFQGKTLGDFLNDASPTPTAVKKREAWFDVPHRELFYKEEDLRCFR
TNGTYIGDDCDPDDLEEEAAGTEQEPYQESEPPAVSVFFSADDATRVPRR
KEAEHTECQEKGEWEEEGEGRLPGTGSTGYRPAQTPEELCLGAAAFAAAS
AAYGRPSSSGSGSKEDHRTGSSRNVNKSGGHGGPKQQQKQRHERVGGKRQ
RSAASGDGGSTGASVGDSSGDDPRKRRRAAGGVLAPTSSSLGRAAATKSV
LGEIGVANSKDPMHKKLLEFRQKKSSTSAAVAGAGKSKAPTKGKRAVSKT
TSVQTVAAIQAKPARGRPASTRGRTNVASVRGSRSASLKGSVTSAAGAPA
RGMAGTANSTPHGVSLGVSSASIAGGPEAEAKKSVSSSTNVRKNVPKTVS
KPVTTVKRNVSGNGGGVGGPKSAREQSTGVKRKGPAVLSSNVTDRTKR
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