mRNA_Ecto-sp13_S_contig13715.2924.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13715.2924.1 vs. uniprot
Match: A0A6H5JCD9_9PHAE (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCD9_9PHAE) HSP 1 Score: 496 bits (1276), Expect = 2.730e-175 Identity = 238/241 (98.76%), Postives = 239/241 (99.17%), Query Frame = 1
Query: 1 QEILCEKTRVLAKRQKLVGLSVGGRPAADDCPLERIRLKTPHRFILMGTPEAEIFVDPREKEDLPEVFDDFDLDVSHTSEAWRQAIENSDNLAKFTEKTELHFMNPPRDGKALLVLDLDHTLLDFTTRETASPEQMKRPHMDSFLTTVYEHYDLAIWSQTSWRWLELKLTELGFLNNPNFRICTVLDKTSMFGVTSTKKDGEQRRHQVKPLKIIWDKYPRWHASNTLHVDDLSRNFALNPK 723
+EILCEKTRVLAKRQKLVGLSVGGRPAADDCPLERIRLKTPHRFILMGTPEAEIFVDP EKEDLPEVFDDFDLDVSH SEAWRQAIENSDNLAKFTEKTELHFMNPPRDGKALLVLDLDHTLLDFTTRETASPEQMKRPHMDSFLTTVYEHYDLAIWSQTSWRWLELKLTELGFLNNPNFRICTVLDKTSMFGVTSTKKDGEQRRHQVKPLKIIWDKYPRWHASNTLHVDDLSRNFALNPK
Sbjct: 83 KEILCEKTRVLAKRQKLVGLSVGGRPAADDCPLERIRLKTPHRFILMGTPEAEIFVDPGEKEDLPEVFDDFDLDVSHASEAWRQAIENSDNLAKFTEKTELHFMNPPRDGKALLVLDLDHTLLDFTTRETASPEQMKRPHMDSFLTTVYEHYDLAIWSQTSWRWLELKLTELGFLNNPNFRICTVLDKTSMFGVTSTKKDGEQRRHQVKPLKIIWDKYPRWHASNTLHVDDLSRNFALNPK 323
BLAST of mRNA_Ecto-sp13_S_contig13715.2924.1 vs. uniprot
Match: D7FKN5_ECTSI (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKN5_ECTSI) HSP 1 Score: 492 bits (1266), Expect = 5.520e-175 Identity = 237/240 (98.75%), Postives = 238/240 (99.17%), Query Frame = 1
Query: 4 EILCEKTRVLAKRQKLVGLSVGGRPAADDCPLERIRLKTPHRFILMGTPEAEIFVDPREKEDLPEVFDDFDLDVSHTSEAWRQAIENSDNLAKFTEKTELHFMNPPRDGKALLVLDLDHTLLDFTTRETASPEQMKRPHMDSFLTTVYEHYDLAIWSQTSWRWLELKLTELGFLNNPNFRICTVLDKTSMFGVTSTKKDGEQRRHQVKPLKIIWDKYPRWHASNTLHVDDLSRNFALNPK 723
EIL EKTRVLAKRQKLVGLSVGGRPAADDCPLERIRLKTPHRFILMGTPEAEIFVDPREKEDLPEVFDDFDLDVSH SEAWRQAIENSDNLAKFTEKTELHFMNPPRDGKALLVLDLDHTLLDFTTRETASPEQMKRPHMDSFL+TVYEHYDLAIWSQTSWRWLELKLTELGFLNNPNFRICTVLDKTSMFGVTSTKKDGEQRRHQVKPLKIIWDKYPRWHASNTLHVDDLSRNFALNPK
Sbjct: 6 EILREKTRVLAKRQKLVGLSVGGRPAADDCPLERIRLKTPHRFILMGTPEAEIFVDPREKEDLPEVFDDFDLDVSHASEAWRQAIENSDNLAKFTEKTELHFMNPPRDGKALLVLDLDHTLLDFTTRETASPEQMKRPHMDSFLSTVYEHYDLAIWSQTSWRWLELKLTELGFLNNPNFRICTVLDKTSMFGVTSTKKDGEQRRHQVKPLKIIWDKYPRWHASNTLHVDDLSRNFALNPK 245
BLAST of mRNA_Ecto-sp13_S_contig13715.2924.1 vs. uniprot
Match: A0A836CHP5_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHP5_9STRA) HSP 1 Score: 337 bits (865), Expect = 5.630e-114 Identity = 163/246 (66.26%), Postives = 197/246 (80.08%), Query Frame = 1
Query: 7 ILCEKTRVLAKRQKLVGLSVGGRPAADDCPLERI-RLKTPHRFILMGTPEAEIFVDPREKEDLPEVFDDFDLDVSHTSEAWRQAIENSDNLAKFTEKTELHFMNPPRDGKALLVLDLDHTLLDFTTRE-------TASPEQMKRPHMDSFLTTVYEHYDLAIWSQTSWRWLELKLTELGFLNNPNFRICTVLDKTSMFGVTSTKKDGEQRRHQVKPLKIIWDKYPRWHASNTLHVDDLSRNFALNP 720
+L EKT VL KRQKL+GLS+ G+PA+D+ PL + +LK PHRFILMGTPEA+IFVDP++ ++LPEVFDDFDL+++ SE WR AIENS+NLA+FTE TE+HF++ PR+GK LLVLDLDHTLLDF+ R A +KRPHMD+FLT VY YDLA+WSQTSWRWLELKLTELG L +P ++I VLDKTSMF VTST + G++RRHQVKPL IIW K+P W +NT HVDDL RNFALNP
Sbjct: 1 MLQEKTNVLMKRQKLIGLSINGKPASDETPLTHLSKLKNPHRFILMGTPEADIFVDPQDCQELPEVFDDFDLEMAPHSEQWRHAIENSENLARFTETTEVHFIHQPREGKRLLVLDLDHTLLDFSGRSGGTDAGLVADRVSLKRPHMDAFLTAVYAEYDLAVWSQTSWRWLELKLTELGLLYHPAYKISFVLDKTSMFHVTSTDRAGKERRHQVKPLHIIWRKFPHWTEANTYHVDDLGRNFALNP 246
BLAST of mRNA_Ecto-sp13_S_contig13715.2924.1 vs. uniprot
Match: A0A4D9CWG5_9STRA (FCP1 homology domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWG5_9STRA) HSP 1 Score: 313 bits (801), Expect = 3.020e-102 Identity = 150/249 (60.24%), Postives = 193/249 (77.51%), Query Frame = 1
Query: 7 ILCEKTRVLAKRQKLVGLSV-GGRPAADDCPLERIRLKT---PHRFILMGTPEAEIFVDPREKEDLPEVFDDFDLDVSHTSEAWRQAIENSDNLAKFTEKTELHFMNPPRDGKALLVLDLDHTLLDFTTRETA--------SPEQMKRPHMDSFLTTVYEHYDLAIWSQTSWRWLELKLTELGFLNNPNFRICTVLDKTSMFGVTSTKKDGEQRRHQVKPLKIIWDKYPRWHASNTLHVDDLSRNFALN 717
IL KTRVL ++QK++GL++ GG+ A ++ L+++ +K P RF+L+GTPEAE+FVDP EKE LPEVFDDFDLDV+ SE WR++++NS+NL KFT KT++H +NPPRDGK LLVLDLDHTLLDF++RE + MKRPH+D+FL VY +YDL WSQTSWRWLE+K+ ELG L +P +R C VLDKTSMF V STK DG +HQVKPL++IW K+P+W +N++HVDDLSRNFALN
Sbjct: 95 ILEAKTRVLPEKQKIIGLTIQGGKVAKNEHTLDQLVVKDKRGPVRFMLIGTPEAEVFVDPHEKESLPEVFDDFDLDVTALSEGWRRSVQNSENLRKFTAKTQVHLINPPRDGKRLLVLDLDHTLLDFSSREDVIDRLPMAEAASVMKRPHLDAFLAAVYPYYDLVAWSQTSWRWLEIKMVELGLLTHPAYRFCFVLDKTSMFHVESTKGDGSLFKHQVKPLQLIWTKFPQWDENNSIHVDDLSRNFALN 343
BLAST of mRNA_Ecto-sp13_S_contig13715.2924.1 vs. uniprot
Match: B7FS87_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FS87_PHATC) HSP 1 Score: 281 bits (719), Expect = 1.620e-90 Identity = 148/260 (56.92%), Postives = 175/260 (67.31%), Query Frame = 1
Query: 7 ILCEKTRVLAKRQKLVGLSV---GGRPAADDCPLERIRLKTP---------HRFILMGTPEAEIFVDPREKEDLPEVFDDFDLDVSHTSEAWRQAIENSDNLAKFTEKTELHFMNPPRDGKALLVLDLDHTLLDFTTRE-----TASPEQ-----MKRPHMDSFLTTVYEHYDLAIWSQTSWRWLELKLTELGFLNNPNFRICTVLDKTSMFGVTSTKKDGEQRRHQVKPLKIIWDKYPRWHASNTLHVDDLSRNFALNP 720
+L EKTR+L KRQKLVGL G + D PL +++K H FILMGTPE +IFVDPR+ DLP+V DDFDLD+ +Q I N D L KFTEKT +H M+PPR+GK LLVLDLDHTLLDF+++ + P Q MKRP MD FL Y+HYDL +WSQTSWRWLE KLTELG L P +R C VLDKTSMF +TS ++DG +H VKPL IIW K+P W NT+HVDDLSRNFALNP
Sbjct: 81 MLQEKTRILPKRQKLVGLVAQQGGAKSVVDALPLSSLKVKGKSTGNNGEIIHHFILMGTPEEDIFVDPRDHPDLPDVMDDFDLDLDP-----QQHI-NQDLLLKFTEKTAIHIMHPPREGKPLLVLDLDHTLLDFSSKTLQRDGSTLPGQGLAAAMKRPFMDDFLAICYQHYDLVVWSQTSWRWLETKLTELGMLTQPRYRFCFVLDKTSMFQITSKRRDGASVQHHVKPLHIIWRKFPCWDVHNTVHVDDLSRNFALNP 334
BLAST of mRNA_Ecto-sp13_S_contig13715.2924.1 vs. uniprot
Match: A0A1Z5KH34_FISSO (Protein phosphatase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KH34_FISSO) HSP 1 Score: 281 bits (719), Expect = 1.670e-90 Identity = 143/261 (54.79%), Postives = 177/261 (67.82%), Query Frame = 1
Query: 7 ILCEKTRVLAKRQKLVGLSV---GGRPAADDCPLERIRL----------KTPHRFILMGTPEAEIFVDPREKEDLPEVFDDFDLDVSHTSEAWRQAIENSDNLAKFTEKTELHFMNPPRDGKALLVLDLDHTLLDFTTRET-----------ASPEQMKRPHMDSFLTTVYEHYDLAIWSQTSWRWLELKLTELGFLNNPNFRICTVLDKTSMFGVTSTKKDGEQRRHQVKPLKIIWDKYPRWHASNTLHVDDLSRNFALN 717
IL E+TRVL KRQKLVGL G + D P+ ++ +T H+FILMGTPE IFVDP + ++LP+V +DFDLD + SE W + + N +NL KFT T +H MNPPRDGK LLVLDLDHTLLDF++R + + MKRPHMD FLT +Y +YDL +WSQTSWRWLE KLTELG + ++ C VLDKTSMF VT+T K + R H VKPL+IIW K+ RW A+NT+H+DDLSRNFALN
Sbjct: 68 ILQERTRVLCKRQKLVGLVANEGGAKGVHDALPIMHLKSNAKLKLTSANRTTHQFILMGTPEESIFVDPDQLDELPDVIEDFDLDFNAGSEEWLRHVANGENLKKFTADTLIHMMNPPRDGKPLLVLDLDHTLLDFSSRSLQRDAVSVQVGQGAAKTMKRPHMDEFLTHMYHYYDLVVWSQTSWRWLETKLTELGMIGTA-YKFCFVLDKTSMFTVTTTDKHNQTRTHHVKPLQIIWSKFSRWSAANTVHLDDLSRNFALN 327
BLAST of mRNA_Ecto-sp13_S_contig13715.2924.1 vs. uniprot
Match: A0A7R9ZLA6_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZLA6_9STRA) HSP 1 Score: 280 bits (715), Expect = 4.520e-90 Identity = 138/265 (52.08%), Postives = 180/265 (67.92%), Query Frame = 1
Query: 1 QEILCEKTRVLAKRQKLVGLSVGGR-PAADDCPLERIRLKTP--------------HRFILMGTPEAEIFVDPREKEDLPEVFDDFDLDVSHTSEAWRQAIENSDNLAKFTEKTELHFMNPPRDGKALLVLDLDHTLLDFTTRE-----------TASPEQMKRPHMDSFLTTVYEHYDLAIWSQTSWRWLELKLTELGFLNNPNFRICTVLDKTSMFGVTSTKKDGEQRRHQVKPLKIIWDKYPRWHASNTLHVDDLSRNFALN 717
+E+L +KTRVL KRQKL+GL++ + P +DD L+ +++K H+FILMGTPE +IFVDP +++DLP+V DDFDLD + S+ W + N L KFT T++ M+ PR GK LLVLDLDHTLLDF+++ + MKRP MD FLT Y++YDL +WSQTSWRWLE KLTELG L +P +R C VLDKTSMF V ST+++G H VKPL+IIW K+P+W + NT+H+DDLSRNFALN
Sbjct: 48 KELLQQKTRVLPKRQKLIGLALQNKGPVSDDVMLKALKVKASNKKANAASASAGVVHQFILMGTPEKDIFVDPGDRDDLPDVVDDFDLDFNAGSDEWLNHVANDGKLKKFTASTQIPIMSQPRQGKPLLVLDLDHTLLDFSSKSLQQDSASHAVGAGAAAVMKRPFMDEFLTNAYKYYDLVVWSQTSWRWLETKLTELGMLIHPGYRFCFVLDKTSMFTVKSTRRNGTSVNHHVKPLQIIWSKFPQWGSHNTVHIDDLSRNFALN 312
BLAST of mRNA_Ecto-sp13_S_contig13715.2924.1 vs. uniprot
Match: A0A7S3ZW18_9STRA (Protein-serine/threonine phosphatase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZW18_9STRA) HSP 1 Score: 263 bits (672), Expect = 5.350e-84 Identity = 128/245 (52.24%), Postives = 172/245 (70.20%), Query Frame = 1
Query: 10 LCEKTRVLAKRQKLVGLSVGGRPAADDCPLERIRL---KTPHRFILMGTPEAEIFVDPREKEDLPEVFDDFDLDVSHT--SEAWRQAIENSDNLAKFTEKTELHFMNPPRDGKALLVLDLDHTLLDFTTRE--TASPEQMKRPHMDSFLTTVYEHYDLAIWSQTSWRWLELKLTELGFLNNPNFRICTVLDKTSMFGVTSTKKDGEQRRHQVKPLKIIWDKYPRWHASNTLHVDDLSRNFALNPK 723
+ ++T+V AKRQKL+GL G P + E + K P +F+LMGTP+ ++F+DP++++DLPE+ DD D D + S+ W ++ ++ L KF KTE++++ P R GK LLVLDLDHTLLDF + T KRP MD+FL VYE YDL +WSQT WRWLELKLT LG L++ F+IC VLDKTSMF + S +KDG + +H VKPL++IWDK W+A+NTLH+DDLSRNFALNP+
Sbjct: 53 ITDETQVPAKRQKLIGLVKGALPPDESKLAELVGPRGEKPPTKFLLMGTPDDKLFIDPKDRDDLPEIIDDLDPDFDYQALSDEWHRSRRHAATLEKFVAKTEINWLTPRRKGKKLLVLDLDHTLLDFNRHDPPTQVSANSKRPGMDAFLEAVYEDYDLVVWSQTHWRWLELKLTALGMLSSSKFKICFVLDKTSMFRIVSRRKDGSEFKHAVKPLRLIWDKVDGWNAANTLHLDDLSRNFALNPR 297
BLAST of mRNA_Ecto-sp13_S_contig13715.2924.1 vs. uniprot
Match: A0A6U9VER5_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6U9VER5_9STRA) HSP 1 Score: 264 bits (674), Expect = 1.060e-83 Identity = 139/274 (50.73%), Postives = 175/274 (63.87%), Query Frame = 1
Query: 1 QEILCEKTRVLAKRQKLVGL-SVGGRPAADDCPLERIRLKTP---------------HRFILMGTPEAEIFVDPREKEDLPEVFDDFDLDVSHTSEAWRQAIENSDNLAKFTEKTELHFMNPPRDGKALLVLDLDHTLLDF----------------TTRETASPEQMKRPHMDSFLTTVYEHYDLAIWSQTSWRWLELKLTELGFLNNPNFRICTVLDKTSMFGVTSTKKDGEQRRHQVKPLKIIWDKYPR-WHASNTLHVDDLSRNFALNPK 723
++I+ EKT +L KRQKL+GL ++ D+ L ++ K+ H FILMGT E +IFVDP + ++LPEV DDFDLD + SE W + NL KFTE TE++ ++ PR K L+VLDLDHTLLDF TT++T E+MKRP MD FL Y+ YDL +WSQTSWRWLE KL ELG L NP +R C VLDKTSMF VTST + G Q +H VKPL+IIW+K+P W NT+H+DDLSRNFALNP+
Sbjct: 55 KDIISEKTNILPKRQKLIGLVTINKVKVTDEVLLSDLKPKSKAMTKISENGTIKSIKHNFILMGTAEVDIFVDPDDHDNLPEVVDDFDLDFNAGSEEWLAHVATGQNLKKFTESTEVNIIHEPRRDKPLMVLDLDHTLLDFSRKSIEQASSAECSTNTTQDTI--ERMKRPFMDEFLAKAYQSYDLVVWSQTSWRWLETKLIELGMLANPRYRFCFVLDKTSMFAVTSTSRSGRQVKHYVKPLQIIWNKFPNTWGPHNTVHLDDLSRNFALNPE 326
BLAST of mRNA_Ecto-sp13_S_contig13715.2924.1 vs. uniprot
Match: A0A7S2G8T0_9STRA (Protein-serine/threonine phosphatase n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G8T0_9STRA) HSP 1 Score: 261 bits (668), Expect = 7.560e-83 Identity = 129/242 (53.31%), Postives = 174/242 (71.90%), Query Frame = 1
Query: 7 ILCEKTRVLAKRQKLVGLSVGGRPAADDCPLER---IRLKTPHRFILMGTPEAEIFVDPREKEDLPEVFDDFDLDVSHTSEAWRQAIENSDNLAKFTEKTELHFMNPPRDGKALLVLDLDHTLLDFTTR-ETASPEQMKRPHMDSFLTTVYEHYDLAIWSQTSWRWLELKLTELGFLNNPNFRICTVLDKTSMFGVTSTKKDGEQRRHQVKPLKIIWDKYPRWHASNTLHVDDLSRNFALNP 720
+L + T V RQKL+GL G P DD + R ++ K PH+F L+GTP++++ VDP +++DLPEV DDF+L+ S +W ++ N+ LA+FT KT++ ++ PR GK LLVLDLDHTLLDF+ + + +M+RP++D FL+ V+ YDL IWSQTSWRWLE+K+TELG LNNP +RIC VLDKTSMF + S +K G+ +HQVKPL++IW K+ W A NT HVDDL RNFALNP
Sbjct: 54 LLEDTTLVPICRQKLIGLVKGKLP--DDEMMIRDLVLKGKAPHQFTLLGTPDSQLLVDPADRDDLPEVVDDFNLNFVEFSTSWHRSRRNARKLAEFTAKTDISVISEPRPGKQLLVLDLDHTLLDFSKHGQLQNTMEMQRPYLDEFLSAVFTSYDLVIWSQTSWRWLEVKMTELGMLNNPRYRICFVLDKTSMFSIISQRK-GKDFKHQVKPLQLIWSKFAHWSAENTFHVDDLGRNFALNP 292 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13715.2924.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13715.2924.1 >prot_Ecto-sp13_S_contig13715.2924.1 ID=prot_Ecto-sp13_S_contig13715.2924.1|Name=mRNA_Ecto-sp13_S_contig13715.2924.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=242bp QEILCEKTRVLAKRQKLVGLSVGGRPAADDCPLERIRLKTPHRFILMGTPback to top mRNA from alignment at Ecto-sp13_S_contig13715:960..4329- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13715.2924.1 ID=mRNA_Ecto-sp13_S_contig13715.2924.1|Name=mRNA_Ecto-sp13_S_contig13715.2924.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3370bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13715:960..4329- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13715:960..4329- >mRNA_Ecto-sp13_S_contig13715.2924.1 ID=mRNA_Ecto-sp13_S_contig13715.2924.1|Name=mRNA_Ecto-sp13_S_contig13715.2924.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=726bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13715:960..4329- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |