prot_Ecto-sp13_S_contig13714.2923.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13714.2923.1
Unique Nameprot_Ecto-sp13_S_contig13714.2923.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length131
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13714.2923.1 vs. uniprot
Match: A0A6H5JLH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLH6_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 4.220e-29
Identity = 61/85 (71.76%), Postives = 69/85 (81.18%), Query Frame = 0 
Query:   25 MARHRIAGRLLIASIFVGQAVVTLGFIAPKAFVAVGRSAGEGFLGEILQ-KGLGRGQSCMVSSRTDRGVDDGATMRLGVKAKAST 108
            MA HR+A  LL+AS+FV QAVVTLGFI+PKA VAVGR+AGE F+GE LQ KGLGRGQSCMVSSR D    DGATMRLGV   A++
Sbjct:    1 MAPHRLAALLLVASVFVCQAVVTLGFISPKASVAVGRTAGEAFVGETLQQKGLGRGQSCMVSSRPDNRGGDGATMRLGVSMGAAS 85
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BLAST of mRNA_Ecto-sp13_S_contig13714.2923.1 vs. uniprot
Match: D7G820_ECTSI (UDP-sulfoquinovose: diacylglycerol alpha-sulfoquinovosyltransferase SQD2, N-terminal, family GT4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G820_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 1.070e-26
Identity = 60/85 (70.59%), Postives = 65/85 (76.47%), Query Frame = 0 
Query:   25 MARHRIAGRLLIASIFVGQAVVTLGFIAPKAFVAVGRSAGEGFLGEILQ-KGLGRGQSCMVSSRTDRGVDDGATMRLGVKAKAST 108
            MA H +A  LL+AS+FV Q VVTLGFIAPKA VAVG SAGEGFLGE LQ KGL RGQ CMVSSR D    DGATMRLG+  K +T
Sbjct:    1 MAPHSLAALLLVASVFVCQVVVTLGFIAPKASVAVGSSAGEGFLGETLQQKGLRRGQGCMVSSRPDSRGGDGATMRLGLSGKKTT 85
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BLAST of mRNA_Ecto-sp13_S_contig13714.2923.1 vs. uniprot
Match: D7G803_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G803_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 6.720e-15
Identity = 43/56 (76.79%), Postives = 46/56 (82.14%), Query Frame = 0 
Query:   25 MARHRIAGRLLIASIFVGQAVVTLGFIAPKAFVAVGRSAGEGFLGEILQ-KGLGRG 79
            MA HR+A  LL+AS+FV Q VVTLGFIAPKA VAVG SAGEGFLGE LQ KGLG G
Sbjct:    1 MAPHRLAALLLVASVFVCQVVVTLGFIAPKASVAVGSSAGEGFLGETLQEKGLGAG 56
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13714.2923.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JLH6_9PHAE4.220e-2971.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G820_ECTSI1.070e-2670.59UDP-sulfoquinovose: diacylglycerol alpha-sulfoquin... [more]
D7G803_ECTSI6.720e-1576.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 53..130
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..52
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..29
NoneNo IPR availableTMHMMTMhelixcoord: 30..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13714contigEcto-sp13_S_contig13714:2813..4021 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13714.2923.1mRNA_Ecto-sp13_S_contig13714.2923.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13714 1838..4028 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13714.2923.1 ID=prot_Ecto-sp13_S_contig13714.2923.1|Name=mRNA_Ecto-sp13_S_contig13714.2923.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=131bp
MHAYVDTHGAHHRAVDSGVVRTPFMARHRIAGRLLIASIFVGQAVVTLGF
IAPKAFVAVGRSAGEGFLGEILQKGLGRGQSCMVSSRTDRGVDDGATMRL
GVKAKASTAGGKVGRRKRCSRCVQVYRGSA*
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