prot_Ecto-sp13_S_contig13700.2916.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13700.2916.1
Unique Nameprot_Ecto-sp13_S_contig13700.2916.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length97
Homology
BLAST of mRNA_Ecto-sp13_S_contig13700.2916.1 vs. uniprot
Match: D7FQF2_ECTSI (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQF2_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 1.560e-61
Identity = 96/97 (98.97%), Postives = 97/97 (100.00%), Query Frame = 0
Query:    1 MPELPEVETSRLYVEEFCLGSTITNVHATEQGGGPRDGQFDDIVIGEDVTAKSLKDTLEGRKIVELRRRGKQMWFVLDKPPHPLFHFGMTGAFTVKG 97
            MPELPEVETSRLYVEEFCLGSTITNVHATEQGGGPRDGQFDDIVIGED+TAKSLKDTLEGRKIVELRRRGKQMWFVLDKPPHPLFHFGMTGAFTVKG
Sbjct:    1 MPELPEVETSRLYVEEFCLGSTITNVHATEQGGGPRDGQFDDIVIGEDMTAKSLKDTLEGRKIVELRRRGKQMWFVLDKPPHPLFHFGMTGAFTVKG 97          
BLAST of mRNA_Ecto-sp13_S_contig13700.2916.1 vs. uniprot
Match: A0A6H5JAV5_9PHAE (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAV5_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 2.280e-45
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0
Query:    1 MPELPEVETSRLYVEEFCLGSTITNVHATEQGGGPRDGQFDDIVIGEDVTAKSLKDTLEGRKIVELRRRGKQMWFVLDK 79
            MPELPEVETSRLYVEEFCLGSTITNVHATEQGGGPRDGQFDDIVIGEDVTAKSLKDTLEGRKIVELRRRGKQMWFVLDK
Sbjct:    1 MPELPEVETSRLYVEEFCLGSTITNVHATEQGGGPRDGQFDDIVIGEDVTAKSLKDTLEGRKIVELRRRGKQMWFVLDK 79          
BLAST of mRNA_Ecto-sp13_S_contig13700.2916.1 vs. uniprot
Match: A0A7S1N840_9EUGL (DNA-(apurinic or apyrimidinic site) lyase (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1N840_9EUGL)

HSP 1 Score: 120 bits (300), Expect = 2.180e-30
Identity = 58/98 (59.18%), Postives = 70/98 (71.43%), Query Frame = 0
Query:    1 MPELPEVETSRLYVEEFCLGSTITNVHATEQGGGPRDGQFDDIVIGEDVTAKSLKDTLEGRKIVELRRRGKQMWFVLDKPP-HPLFHFGMTGAFTVKG 97
            MPELPEV+ +R  V + C G  I  V   E GGGPRDGQFDDIVIGE VT + L  +++GRK+V + R+GKQ+WF L      PLFHFGMTG+FTVKG
Sbjct:   15 MPELPEVDAARQLVMQHCGGKVIDQVLCVESGGGPRDGQFDDIVIGEGVTPEKLTKSMKGRKLVAVHRKGKQLWFELGGGDLSPLFHFGMTGSFTVKG 112          
BLAST of mRNA_Ecto-sp13_S_contig13700.2916.1 vs. uniprot
Match: A0A7S2CVY2_9EUKA (DNA-(apurinic or apyrimidinic site) lyase (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2CVY2_9EUKA)

HSP 1 Score: 114 bits (286), Expect = 1.990e-29
Identity = 53/98 (54.08%), Postives = 71/98 (72.45%), Query Frame = 0
Query:    1 MPELPEVETSRLYVEEFCLGSTITNVHATEQGGGPRDGQFDDIVIGE-DVTAKSLKDTLEGRKIVELRRRGKQMWFVLDKPPHPLFHFGMTGAFTVKG 97
            MPELPEVE +R  + + C G +I  V + E GGGPR GQFD+IV  + + TA S+   L+G+++VE+RRRGKQ+W +L  PPH L HFGMTG+F V+G
Sbjct:    1 MPELPEVEAARRLLTDHCAGKSIAMVVSLEGGGGPRSGQFDNIVNDDPECTATSVATALQGKRVVEVRRRGKQLWLLLSAPPHLLAHFGMTGSFVVRG 98          
BLAST of mRNA_Ecto-sp13_S_contig13700.2916.1 vs. uniprot
Match: A0A0M0JLU5_9EUKA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JLU5_9EUKA)

HSP 1 Score: 113 bits (283), Expect = 6.120e-28
Identity = 54/98 (55.10%), Postives = 67/98 (68.37%), Query Frame = 0
Query:    1 MPELPEVETSRLYVEEFCLGSTITNVHATEQGGGPRDGQFDDIVIGE-DVTAKSLKDTLEGRKIVELRRRGKQMWFVLDKPPHPLFHFGMTGAFTVKG 97
            MPELPEVET+R  +   C+   IT     E GGGPRDG FD+IV  + +  A  +   LEG+++VE+RRRGKQ+W VL  PPH L HFGMTGAF V+G
Sbjct:    1 MPELPEVETARNLLATHCVSQRITMAVTVEGGGGPRDGLFDEIVFDDKEADAAIVSSLLEGKQLVEVRRRGKQLWLVLSSPPHLLAHFGMTGAFVVRG 98          
BLAST of mRNA_Ecto-sp13_S_contig13700.2916.1 vs. uniprot
Match: A0A835YY62_9STRA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY62_9STRA)

HSP 1 Score: 107 bits (267), Expect = 4.080e-25
Identity = 49/93 (52.69%), Postives = 65/93 (69.89%), Query Frame = 0
Query:    1 MPELPEVETSRLYVEEFCLGSTITNVHATEQGGGPRDGQFDDIVIGEDVTAKSLKDTLEGRKIVELRRRGKQMWFVLD-KPPHPLFHFGMTGA 92
            MPELPEVE +R  +EE C+G+ I +V+A E GGGPRDGQFDDI++GE VT + +   L+GRK++   R+GK +W  L+ K  HP  H GMT  
Sbjct:    1 MPELPEVECARRLLEEHCVGAKIVSVNARESGGGPRDGQFDDIIMGEGVTEEDVVAALKGRKLLHAGRKGKNLWLELEGKGKHPTMHLGMTAC 93          
BLAST of mRNA_Ecto-sp13_S_contig13700.2916.1 vs. uniprot
Match: A0A7S3HGH2_9STRA (DNA-(apurinic or apyrimidinic site) lyase (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HGH2_9STRA)

HSP 1 Score: 100 bits (249), Expect = 4.500e-23
Identity = 53/105 (50.48%), Postives = 67/105 (63.81%), Query Frame = 0
Query:    1 MPELPEVETSRLYVEEFCLGSTITNVHATEQGGGPRDGQFDDIVI-----GEDVTAKSLKDTLEGRKIVE-LRRRGKQMWFVLDKPPHP--LFHFGMTGAFTVKG 97
            MPELPEVE +R ++E  C GSTI +V   EQGGGPR+G FDDIV      G    ++SL  T   RK ++ + R+GKQ WF   +P  P  LFHFGMTG+  +KG
Sbjct:    1 MPELPEVEAARRFIERLCAGSTIVSVTTREQGGGPREGSFDDIVFEHVSDGTTNDSESLYHTALLRKTLKCVHRKGKQFWFEFAEPESPCVLFHFGMTGSCAIKG 105          
BLAST of mRNA_Ecto-sp13_S_contig13700.2916.1 vs. uniprot
Match: A0A7S0NUS3_9EUKA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NUS3_9EUKA)

HSP 1 Score: 100 bits (249), Expect = 5.060e-23
Identity = 50/103 (48.54%), Postives = 64/103 (62.14%), Query Frame = 0
Query:    1 MPELPEVETSRLYVEEFCLGSTITNVHATEQGGGPRDGQFDDIVIGEDVTAKSLKDTLEGRKIVELRRRGKQMWFVLDKPPHP------LFHFGMTGAFTVKG 97
            MPELPEVE  R  +E   LG  +T + ATEQGGGPRDG+FDD ++GE VT   L   L+ + ++ ++RRGKQ+W  L            L HFGMTGA  +KG
Sbjct:    1 MPELPEVEAQRRTIEAATLGKQVTLLVATEQGGGPRDGEFDDKIVGEGVTPPELAAALQDKWVLAVKRRGKQLWVELSATRGGACCGCLLLHFGMTGAVVIKG 103          
BLAST of mRNA_Ecto-sp13_S_contig13700.2916.1 vs. uniprot
Match: R1ELS3_EMIHU (DNA-(apurinic or apyrimidinic site) lyase n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1ELS3_EMIHU)

HSP 1 Score: 97.1 bits (240), Expect = 1.130e-21
Identity = 52/103 (50.49%), Postives = 63/103 (61.17%), Query Frame = 0
Query:    1 MPELPEVETSRLYVEEFCLGSTITNVHATEQGGGPRDGQFDDIVIGEDVTAKSLKDTLEGRKIVELRRRGKQMWFVLDKPPHP------LFHFGMTGAFTVKG 97
            MPELPEVE  R  +E   LG  I  + A EQGGGPR+GQFDD VI E+VT   L  TL+ R ++ +RRRGKQ+W  L +          L H GMTGA  V+G
Sbjct:    1 MPELPEVEAQRSTIEAATLGRRIATLIAVEQGGGPREGQFDDKVIAEEVTPDVLAITLQDRWVLGVRRRGKQLWLELGESKGGACCACLLIHMGMTGAVIVQG 103          
BLAST of mRNA_Ecto-sp13_S_contig13700.2916.1 vs. uniprot
Match: A0A7S0PXV9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PXV9_9EUKA)

HSP 1 Score: 85.5 bits (210), Expect = 1.030e-19
Identity = 43/77 (55.84%), Postives = 49/77 (63.64%), Query Frame = 0
Query:    1 MPELPEVETSRLYVEEFCLGSTITNVHATEQGGGPRDGQFDDIVIGEDVTAKSLKDTLEGRKIVELRRRGKQMWFVL 77
            MPELPEVE  R  ++E  +G  I  + ATEQGGGPRDG FDD V+ E V    L   LEGR I   RRRGKQ+W  L
Sbjct:    5 MPELPEVEAQRRMLQETVVGMRIDALCATEQGGGPRDGMFDDKVVAEGVCVVDLAAALEGRWICAARRRGKQLWLEL 81          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13700.2916.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQF2_ECTSI1.560e-6198.97DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]
A0A6H5JAV5_9PHAE2.280e-45100.00DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]
A0A7S1N840_9EUGL2.180e-3059.18DNA-(apurinic or apyrimidinic site) lyase (Fragmen... [more]
A0A7S2CVY2_9EUKA1.990e-2954.08DNA-(apurinic or apyrimidinic site) lyase (Fragmen... [more]
A0A0M0JLU5_9EUKA6.120e-2855.10DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]
A0A835YY62_9STRA4.080e-2552.69DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]
A0A7S3HGH2_9STRA4.500e-2350.48DNA-(apurinic or apyrimidinic site) lyase (Fragmen... [more]
A0A7S0NUS3_9EUKA5.060e-2348.54DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]
R1ELS3_EMIHU1.130e-2150.49DNA-(apurinic or apyrimidinic site) lyase n=3 Tax=... [more]
A0A7S0PXV9_9EUKA1.030e-1955.84Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012319Formamidopyrimidine-DNA glycosylase, catalytic domainSMARTSM00898Fapy_DNA_glyco_2coord: 2..97
e-value: 6.6E-5
score: 11.3
IPR012319Formamidopyrimidine-DNA glycosylase, catalytic domainPFAMPF01149Fapy_DNA_glycocoord: 1..95
e-value: 6.7E-21
score: 75.1
IPR012319Formamidopyrimidine-DNA glycosylase, catalytic domainPROSITEPS51068FPG_CATcoord: 2..97
score: 19.044
IPR035937MutM-like, N-terminalGENE3D3.20.190.10coord: 1..97
e-value: 5.0E-23
score: 83.7
IPR035937MutM-like, N-terminalSUPERFAMILY81624N-terminal domain of MutM-like DNA repair proteinscoord: 2..95
NoneNo IPR availablePANTHERPTHR22993:SF25coord: 1..97
NoneNo IPR availablePANTHERPTHR22993FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASEcoord: 1..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13700contigEcto-sp13_S_contig13700:2852..3984 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13700.2916.1mRNA_Ecto-sp13_S_contig13700.2916.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13700 2852..3984 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13700.2916.1 ID=prot_Ecto-sp13_S_contig13700.2916.1|Name=mRNA_Ecto-sp13_S_contig13700.2916.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=97bp
MPELPEVETSRLYVEEFCLGSTITNVHATEQGGGPRDGQFDDIVIGEDVT
AKSLKDTLEGRKIVELRRRGKQMWFVLDKPPHPLFHFGMTGAFTVKG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012319FPG_cat
IPR035937MutM-like_N-ter