prot_Ecto-sp13_S_contig137.2911.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig137.2911.1
Unique Nameprot_Ecto-sp13_S_contig137.2911.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length520
Homology
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BLAST of mRNA_Ecto-sp13_S_contig137.2911.1 vs. uniprot
Match: D8LFN0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN0_ECTSI)

HSP 1 Score: 432 bits (1112), Expect = 1.500e-145
Identity = 240/389 (61.70%), Postives = 242/389 (62.21%), Query Frame = 0 
Query:   14 DETRGPELRQGLDLFRVINRTGLQIRRGVGLNSEPCGRLFAGDVFCVNRCSAVPHRQENKRGKMRQLRLTRLHMVQPYTGWVTWSSKWVEKFQGGDTRPGPIPLKSTLRDNCPVSMVKPSDACSVRGGASSRCDPSKRCGPRHEAQGTHTEWDVLTHQESRTCTPRTTWLHARDGVWPVDVKSIPGPKYFPSVSGANRDHCSAEYGVLFPKERRFLSNATRYLSKGHERQARGVFSPGPAMYVGHDEILPLAPRPPPPASAPGSSRCRQHPPSSRTAGTGEGKVNVVNKRFLRRPRAVTAGSRVEIGARRRRQPVSGTTGAGAGSPYIGLKEQGAADKIVGKANAGTTGCPVIRTLVSSRGEREGPDGCFVTRMGAESPGPASHYPNVS 402
            D   GPELRQGLDLFRVINRTGLQIRRGVGLNSEPCGRLFAGDVFCVNRCSAVPH QENKRGKMRQLRLTRLHMVQPYTGWVTWSSKWVEKFQGGDTRPGPIPLKSTLRDNCPVSMVKPSDAC VR GASSR                                         DGVWPVDVKSIPGPKY PSVSGANRDH SAEYGV+FPKERRFLSN+TR                                                                                          RQPVS TT AGAGSPYIGLKEQ AADKIVGKANAGTTGCPVIRTLVSSRGEREGPDGCFVTRMGAESPGP S   N S
Sbjct:   18 DRNSGPELRQGLDLFRVINRTGLQIRRGVGLNSEPCGRLFAGDVFCVNRCSAVPHHQENKRGKMRQLRLTRLHMVQPYTGWVTWSSKWVEKFQGGDTRPGPIPLKSTLRDNCPVSMVKPSDACPVRRGASSR-----------------------------------------DGVWPVDVKSIPGPKYLPSVSGANRDHSSAEYGVVFPKERRFLSNSTR------------------------------------------------------------------------------------------RQPVSSTTAAGAGSPYIGLKEQEAADKIVGKANAGTTGCPVIRTLVSSRGEREGPDGCFVTRMGAESPGPTSGERNGS 275
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig137.2911.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LFN0_ECTSI1.500e-14561.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig137contigEcto-sp13_S_contig137:8687..12488 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig137.2911.1mRNA_Ecto-sp13_S_contig137.2911.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig137 8687..12508 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig137.2911.1 ID=prot_Ecto-sp13_S_contig137.2911.1|Name=mRNA_Ecto-sp13_S_contig137.2911.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=520bp
MFLCRTPGDRFPHDETRGPELRQGLDLFRVINRTGLQIRRGVGLNSEPCG
RLFAGDVFCVNRCSAVPHRQENKRGKMRQLRLTRLHMVQPYTGWVTWSSK
WVEKFQGGDTRPGPIPLKSTLRDNCPVSMVKPSDACSVRGGASSRCDPSK
RCGPRHEAQGTHTEWDVLTHQESRTCTPRTTWLHARDGVWPVDVKSIPGP
KYFPSVSGANRDHCSAEYGVLFPKERRFLSNATRYLSKGHERQARGVFSP
GPAMYVGHDEILPLAPRPPPPASAPGSSRCRQHPPSSRTAGTGEGKVNVV
NKRFLRRPRAVTAGSRVEIGARRRRQPVSGTTGAGAGSPYIGLKEQGAAD
KIVGKANAGTTGCPVIRTLVSSRGEREGPDGCFVTRMGAESPGPASHYPN
VSSISSRGCPVFATPTALDAEEWERRNKSSNSKALHHQPAKMSAIPKTSQ
VHRRWPAYTHLRDEGRISGNLGQDSPGPGAVNIADHDPFRASSFLKMDVC
HPPPASNAASFPCRVPFGQ*
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