prot_Ecto-sp13_S_contig13697.2909.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13697.2909.1
Unique Nameprot_Ecto-sp13_S_contig13697.2909.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length488
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13697.2909.1 vs. uniprot
Match: D8LMZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMZ6_ECTSI)

HSP 1 Score: 760 bits (1963), Expect = 4.010e-266
Identity = 424/489 (86.71%), Postives = 429/489 (87.73%), Query Frame = 0 
Query:    1 MDEYAWPSSLPAPGRRGKRSGMGVDHVGRLLAGRRAEEPARKLPDPAVVARLGAAADRALRAGSLGHLSEMCRLKSPPLACRRLMLGLVMALGLRWRRWSDIRTHLLGNKPELQGFLKRFNKDRAGLASAALLPFVEDPSLSPAEVRRVAACMVWVSRWLHALHDYLAVKEGKELDLDTMPMFQESAASRSRATSARRRQSSGWRAHGTVPGTVLGTVPPDGESKGRERRRLGAGEGGSGTQPRISGTAVAAGATAATMGLSEQKHDEDHHHGRGGMRKTLRPSRAAATRGDDSTCPPGSTPTGGDTEGGARREGFRYFGEEGRVGASGKVDVDGDLESESQWTVGTVTSRGDVLRTPTEDQVDIGSSVVVGDGKENVRKAPDKHAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRAGT-TLGFEETLAPKKGGRGGSVRRGLSRGDTQASHACIYRHKHKGRTPSRFANPKVQGTV 488
            MDEYAWPSSLPAPGRRGKRSGMGVDHVGRLLAGRRAEEPARKLPDPAVVARLGAAADRAL AGSLGHLSEMCRLKSPPLACRRLMLGLV+ALGLRWRRWSDIRTHLLGNKPELQGFLKRFNKDRAGLAS ALLPFVEDPSLSPAEVRRVAACMVWV RWLHALHDYLAVKEGKELD+DTMPMFQE A SRSRA  ARRRQSSG RAHGTVPGTV    PPDG SKGRE RR GAGEGGSGTQPR SGTA AAGATAATMGLSEQKHD+ HHHGRGG RKT RPSRAAATRGDDSTCPPGSTPTGGDTEGG+R EGFRYFGE GR G  GKVDVDGDLESESQWTVGTVTSRGDVLRTPTEDQVDIGSSVVVG GK NVRKAP KHAGXXXXXXXXXXXXXX                         RRAGT TLGFEETLAPK GGR GSVRRGLSRGDTQASHACIYRHKHKGRTPSR ANPK +  V
Sbjct:  491 MDEYAWPSSLPAPGRRGKRSGMGVDHVGRLLAGRRAEEPARKLPDPAVVARLGAAADRALGAGSLGHLSEMCRLKSPPLACRRLMLGLVIALGLRWRRWSDIRTHLLGNKPELQGFLKRFNKDRAGLASTALLPFVEDPSLSPAEVRRVAACMVWVPRWLHALHDYLAVKEGKELDVDTMPMFQEPATSRSRAKLARRRQSSGCRAHGTVPGTV----PPDGASKGREGRRPGAGEGGSGTQPRKSGTAAAAGATAATMGLSEQKHDQGHHHGRGGTRKTRRPSRAAATRGDDSTCPPGSTPTGGDTEGGSRGEGFRYFGEGGRGGDGGKVDVDGDLESESQWTVGTVTSRGDVLRTPTEDQVDIGSSVVVGGGKGNVRKAPHKHAGXXXXXXXXXXXXXXGVPASPPRRRVRSTGDAA-------RRAGTGTLGFEETLAPK-GGRRGSVRRGLSRGDTQASHACIYRHKHKGRTPSRVANPKARRPV 967
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BLAST of mRNA_Ecto-sp13_S_contig13697.2909.1 vs. uniprot
Match: A0A6H5JPQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPQ9_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 2.690e-9
Identity = 32/50 (64.00%), Postives = 36/50 (72.00%), Query Frame = 0 
Query:  439 LAPKKGGRGGSVRRGLSRGDTQASHACIYRHKHKGRTPSRFANPKVQGTV 488
            ++P K G   + R GLSRG TQ SHACIYRHK KGRTPSR ANPK +  V
Sbjct:    1 MSPLKEGPRRAARGGLSRGGTQVSHACIYRHKLKGRTPSRVANPKARRPV 50
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13697.2909.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMZ6_ECTSI4.010e-26686.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPQ9_9PHAE2.690e-964.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.920.20coord: 45..200
e-value: 4.8E-6
score: 27.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13697contigEcto-sp13_S_contig13697:139..4554 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13697.2909.1mRNA_Ecto-sp13_S_contig13697.2909.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13697 139..4575 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13697.2909.1 ID=prot_Ecto-sp13_S_contig13697.2909.1|Name=mRNA_Ecto-sp13_S_contig13697.2909.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=488bp
MDEYAWPSSLPAPGRRGKRSGMGVDHVGRLLAGRRAEEPARKLPDPAVVA
RLGAAADRALRAGSLGHLSEMCRLKSPPLACRRLMLGLVMALGLRWRRWS
DIRTHLLGNKPELQGFLKRFNKDRAGLASAALLPFVEDPSLSPAEVRRVA
ACMVWVSRWLHALHDYLAVKEGKELDLDTMPMFQESAASRSRATSARRRQ
SSGWRAHGTVPGTVLGTVPPDGESKGRERRRLGAGEGGSGTQPRISGTAV
AAGATAATMGLSEQKHDEDHHHGRGGMRKTLRPSRAAATRGDDSTCPPGS
TPTGGDTEGGARREGFRYFGEEGRVGASGKVDVDGDLESESQWTVGTVTS
RGDVLRTPTEDQVDIGSSVVVGDGKENVRKAPDKHAGGGGGGGGGGGGGG
GGRSLSSSGVPASPPRRKVRSTGGAARRAGTTLGFEETLAPKKGGRGGSV
RRGLSRGDTQASHACIYRHKHKGRTPSRFANPKVQGTV
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