mRNA_Ecto-sp13_S_contig13695.2907.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13695.2907.1 vs. uniprot
Match: D7FYS0_ECTSI (Tub domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS0_ECTSI) HSP 1 Score: 635 bits (1637), Expect = 9.570e-225 Identity = 311/320 (97.19%), Postives = 314/320 (98.12%), Query Frame = 1
Query: 1 GNGGESGGERDCVDAAASDDSFSDNIVSSKRRYCGKGEGMATGRCGGDETTEEDGGRGKDSWASIVEGGRSPARCNSLMLSYERGNNSDLVQCVVVRDRSGMNRLYPQYRFFFEGRGDQLMMVAQKCSKNRTSNYHVFDMNRGGFQTRLSKKNGNYLGKVRTNLKRTEAIVFTNDQAIAELGAISFEKPGLVDHLRDGSQPRKFTVLLPALDCDGSPVAHKVDPYDADSDMLSRMKQGRHGNMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDDTLHTVCQFGKVGEDRFHLDYRAPINAFQALCISIAQFNF 960
GNGGESGGERD VDAAASDDSFSDNIVSS+RR+CGKGEGM TGRCGGDETTEEDGGRGKDSWASIVEGGRSPARC SLMLSYERGNNSDLVQCVVVRDRSGMNRLYPQYRFFFEGRGDQLMMVAQKCSKNRTSNYHVFDMNRGGFQTRLSKKNGNYLGKVRTNLKRTEA VFTNDQ +AELGAISFEKPGLVDHLRDGSQPRKFTVLLPALDCDGSPVAHKVDPYDADSDMLSRMKQGRHGNMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDD LHTVCQFGKVGEDRFHLDYRAPINAFQALCISIAQFNF
Sbjct: 275 GNGGESGGERDGVDAAASDDSFSDNIVSSQRRFCGKGEGMVTGRCGGDETTEEDGGRGKDSWASIVEGGRSPARCKSLMLSYERGNNSDLVQCVVVRDRSGMNRLYPQYRFFFEGRGDQLMMVAQKCSKNRTSNYHVFDMNRGGFQTRLSKKNGNYLGKVRTNLKRTEATVFTNDQEVAELGAISFEKPGLVDHLRDGSQPRKFTVLLPALDCDGSPVAHKVDPYDADSDMLSRMKQGRHGNMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDDALHTVCQFGKVGEDRFHLDYRAPINAFQALCISIAQFNF 594
BLAST of mRNA_Ecto-sp13_S_contig13695.2907.1 vs. uniprot
Match: A0A835Z9X0_9STRA (Tubby C-terminal-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9X0_9STRA) HSP 1 Score: 315 bits (807), Expect = 3.200e-104 Identity = 146/231 (63.20%), Postives = 184/231 (79.65%), Query Frame = 1
Query: 268 LVQCVVVRDRSGMNRLYPQYRFFFEGRGDQLMMVAQKCSKNRTSNYHVFDMNRGGFQTRLSKKNGNYLGKVRTNLKRTEAIVFTNDQAIAELGAISFEKPGLVDHLRDGSQPRKFTVLLPALDCDGSPVAHKVDPYDADSDMLSRMKQGRHGNMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDDTLHTVCQFGKVGEDRFHLDYRAPINAFQALCISIAQFNF 960
++QCV++R+R G++RLYP Y+ +F+ R D LMM AQK SK+RTSNYH+FDM+RG LSKK GNYLGKVR+N K+T+ ++TNDQ ELGA+ FEKPGLVDH+ +GSQPRKF VLLP +D D +P+ HKVDPYD M+ +K R G MFLLQ+++P + GNYRLNF GRVTVPSVKNFQLV+PDD + V QFGKVG+DRFHLD+RAP+NAFQA I+++QFNF
Sbjct: 1 MMQCVILRERQGLHRLYPLYKLYFQDR-DTLMMAAQKHSKSRTSNYHIFDMHRGSAARTLSKKGGNYLGKVRSNFKKTDNTIYTNDQEKEELGAVLFEKPGLVDHVMEGSQPRKFYVLLPPIDADSTPIPHKVDPYDPQGPMVELLKARRTGKMFLLQTKDPVFENGNYRLNFRGRVTVPSVKNFQLVAPDDVDYIVGQFGKVGDDRFHLDFRAPLNAFQAFAIALSQFNF 230
BLAST of mRNA_Ecto-sp13_S_contig13695.2907.1 vs. uniprot
Match: A0A7S3YIB9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YIB9_HETAK) HSP 1 Score: 306 bits (785), Expect = 1.200e-100 Identity = 145/236 (61.44%), Postives = 182/236 (77.12%), Query Frame = 1
Query: 253 GNNSDLVQCVVVRDRSGMNRLYPQYRFFFEGRGDQLMMVAQKCSKNRTSNYHVFDMNRGGFQTRLSKKNGNYLGKVRTNLKRTEAIVFTNDQAIAELGAISFEKPGLVDHLRDGSQPRKFTVLLPALDCDGSPVAHKVDPYDADSDMLSRMKQGRHGNMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDDTLHTVCQFGKVGEDRFHLDYRAPINAFQALCISIAQFNF 960
G +++V+C VVRDR+G RLYPQYR +F+ D L +VAQK SKNRTSNYH+FDM R GF LSKKNGNYLGK+R+N K+TE ++FTND ELGAI+FEK G +D +++GSQPRK ++LP LD DG P+ +K + ++ +LSR+K G+ G MF +S++P + KGNYRLNFHGRVTV SVKNFQLVSPDD + VCQFGKV EDRFHLDYRAP NAFQA +++ QFNF
Sbjct: 12 GAGAEMVRCAVVRDRTGARRLYPQYRMYFQDT-DTLALVAQKQSKNRTSNYHIFDMMRAGFGNHLSKKNGNYLGKLRSNSKKTENVIFTNDHEKEELGAITFEKTGFMDQVKEGSQPRKLKIILPQLDPDGIPLPNKPERGRPETSLLSRVKIGQTGRMFYFESKDPVFEKGNYRLNFHGRVTVASVKNFQLVSPDDIDYVVCQFGKVDEDRFHLDYRAPFNAFQAFAVTLCQFNF 246
BLAST of mRNA_Ecto-sp13_S_contig13695.2907.1 vs. uniprot
Match: A0A7S2V188_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V188_9STRA) HSP 1 Score: 273 bits (699), Expect = 3.530e-88 Identity = 128/209 (61.24%), Postives = 161/209 (77.03%), Query Frame = 1
Query: 334 FFEGRGDQLMMVAQKCSKNRTSNYHVFDMNRGGFQTRLSKKNGNYLGKVRTNLKRTEAIVFTNDQAIAELGAISFEKPGLVDHLRDGSQPRKFTVLLPALDCDGSPVAHKVDPYDADSDMLSRMKQGRHGNMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDDTLHTVCQFGKVGEDRFHLDYRAPINAFQALCISIAQFNF 960
+F+ R DQL+MV +K ++NRT NYH+FDM R F LSKKNGNYLGK+RTNL++T+ I++TND E+GAI F KPG VD +++GSQPRK VLLP LD DG PV +K +P D+ +L R++ + G MF LQ+++P + KGNYRLNFHGRVTV SVKNFQL SPDD + VCQFGKV EDRFHLDYRAP+NAFQA +++ QFNF
Sbjct: 2 YFQDR-DQLVMVGKKQAQNRTPNYHIFDMTRAQFGNHLSKKNGNYLGKLRTNLRKTDTIIYTNDAEREEMGAIIFNKPGFVDQVKEGSQPRKLHVLLPQLDADGVPVPNKPNPRRPDTSLLERLRSAKTGKMFCLQTKDPVFEKGNYRLNFHGRVTVASVKNFQLCSPDDIDYVVCQFGKVDEDRFHLDYRAPLNAFQAFALALVQFNF 209
BLAST of mRNA_Ecto-sp13_S_contig13695.2907.1 vs. uniprot
Match: A0A7S2GC62_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GC62_9STRA) HSP 1 Score: 232 bits (592), Expect = 1.740e-71 Identity = 106/241 (43.98%), Postives = 163/241 (67.63%), Query Frame = 1
Query: 253 GNNSDLVQCVVVRDRSGMNRLYPQYRFFFEGR----GDQLMMVAQKCSKNRTSNYHVFDMNRGGFQTRLSKKNGNYLGKVRTNLKRTEAIVFTNDQAIAELGAISFEKPGLVDHLRDGSQPRKFTVLLPALDCDGSPVAHKVDPYDADSDMLSRMKQGR-HGNMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDDTLHTVCQFGKVGEDRFHLDYRAPINAFQALCISIAQFNF 960
G N +VQC++VRDRSG+ RL P+Y + +G ++L+++A+K + +YH+++++RG RL KK GNY+GK++ + + E +++ N++ E+GA+ F KP ++DH+RDG+QPRK V+LP D + P+ K D + +L +++ + L+ +EP + GNYRLNFHGRVTVPSVKNFQLV P D +CQFGKV +DRFHLD++ P+N FQA C+++AQFN+
Sbjct: 7 GPNDPMVQCLIVRDRSGLKRLNPEYNLYLQGGRKKGSEKLILIARKQAHKNGCSYHIYNVSRGHMGGRLRKKGGNYVGKLKCSGTKIENVMYNNEEVKDEIGAVLFAKPTIMDHMRDGAQPRKLKVVLPPADENSLPIPQKNKFNDPYAGLLGQLQSDQLEEGCRQLERKEPVFENGNYRLNFHGRVTVPSVKNFQLVDPRDVADVICQFGKVDDDRFHLDFKGPLNPFQAFCVALAQFNY 247
BLAST of mRNA_Ecto-sp13_S_contig13695.2907.1 vs. uniprot
Match: A0A7S2D0G1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D0G1_9STRA) HSP 1 Score: 232 bits (592), Expect = 9.740e-69 Identity = 106/241 (43.98%), Postives = 163/241 (67.63%), Query Frame = 1
Query: 253 GNNSDLVQCVVVRDRSGMNRLYPQYRFFFEGR----GDQLMMVAQKCSKNRTSNYHVFDMNRGGFQTRLSKKNGNYLGKVRTNLKRTEAIVFTNDQAIAELGAISFEKPGLVDHLRDGSQPRKFTVLLPALDCDGSPVAHKVDPYDADSDMLSRMKQGR-HGNMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDDTLHTVCQFGKVGEDRFHLDYRAPINAFQALCISIAQFNF 960
G N +VQC++VRDRSG+ RL P+Y + +G ++L+++A+K + +YH+++++RG RL KK GNY+GK++ + + E +++ N++ E+GA+ F KP ++DH+RDG+QPRK V+LP D + P+ K D + +L +++ + L+ +EP + GNYRLNFHGRVTVPSVKNFQLV P D +CQFGKV +DRFHLD++ P+N FQA C+++AQFN+
Sbjct: 226 GPNDPMVQCLIVRDRSGLKRLNPEYNLYLQGGRKKGSEKLILIARKQAHKNGCSYHIYNVSRGHMGGRLRKKGGNYVGKLKCSGTKIENVMYNNEEVKDEIGAVLFAKPTIMDHMRDGAQPRKLKVVLPPADENSLPIPQKNKFNDPYAGLLGQLQSDQLEEGCRQLERKEPVFENGNYRLNFHGRVTVPSVKNFQLVDPRDVADVICQFGKVDDDRFHLDFKGPLNPFQAFCVALAQFNY 466
BLAST of mRNA_Ecto-sp13_S_contig13695.2907.1 vs. uniprot
Match: A0A7S2H5B0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H5B0_9STRA) HSP 1 Score: 206 bits (523), Expect = 6.250e-59 Identity = 97/236 (41.10%), Postives = 160/236 (67.80%), Query Frame = 1
Query: 268 LVQCVVVRDRSGMNRLYPQYRFFFEG---RG-DQLMMVAQKCSKNRTSNYHVFDMNRGGFQTRLSKKNGNYLGKVRTNLKRTEAIVFTNDQAIAELGAISFEKPGLVDHLRDGSQPRKFTVLLPALDCDGSPVAHKVDPYDADSDMLSRMKQGR-HGNMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDDTLHTVCQFGKVGEDRFHLDYRAPINAFQALCISIAQFNF 960
+VQC++VR R + R+ +Y+ + +G +G ++L++VA+K ++ + +YH+++++RG RL+KK GNY+GK++ + + E +++ N++ E+G + F KP ++DH+RDG+QPRK +++P ++ P+ V D +L++++ + + +EP + GNYRLNF GRVTVPSVKNFQLVS DD CQFGKV +DRFHLD++ P+NAFQA C+ +AQFN+
Sbjct: 194 MVQCLIVRRRVVLQRI-TEYQLYLQGGRKKGHEKLILVARKQAQKQGCSYHIYNVSRGHLGGRLNKKGGNYVGKLKCSGSKIENVMYNNEEKKQEVGGVMFMKPSIMDHMRDGAQPRKLKLIVPPINEKNCPIPQPVKFNDPYGGLLAQIQVDEIEQGCSVFERKEPVFENGNYRLNFRGRVTVPSVKNFQLVSTDDVSDIKCQFGKVADDRFHLDFKHPMNAFQAFCVCLAQFNY 428
BLAST of mRNA_Ecto-sp13_S_contig13695.2907.1 vs. uniprot
Match: A0A1W0A956_9STRA (Tub domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A956_9STRA) HSP 1 Score: 194 bits (494), Expect = 1.620e-55 Identity = 107/236 (45.34%), Postives = 152/236 (64.41%), Query Frame = 1
Query: 265 DLVQCVVVRDRSGMNRLYPQYRFFFEGRGDQLMMVAQKCSKNRTSNYHVFDMNRGGFQT--RLSKKNGNYLGKVRTNLKRTEAIVFTNDQAIAELGAISFEKPGLVDHLRDGSQPRKFTVLLPAL--DCDGSPVAHKVDPYDADSDMLSRMKQGRHGNMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDDTLHTVCQFGKVGEDRFHLDYRAPINAFQALCISIAQFNF 960
+L + +VR G NRL PQY+FF + ++L+++AQK KNRTSNYH+FDM+ G +LSKK+GNY+GK+R+ R E ++ ++ + ELGAI+FE S+PRK TV+ P L D D V KVD + S ++ ++K G+ ++ +L+++EP Y KG YRLNF+GRV+VPSVKNFQLV + QFGKV + FHLD+R P+ FQA I++ QFNF
Sbjct: 126 NLTEGSIVRCNQGANRLTPQYQFFVK---NKLVLLAQKQLKNRTSNYHIFDMSCGTVAASHKLSKKSGNYIGKLRSCFGRHENVMISSQEEKRELGAITFETKS------SHSKPRKLTVICPGLTKDGDAKSVPSKVDSF---SSLVEQLKLGQTSDLIVLENKEPEYEKGCYRLNFNGRVSVPSVKNFQLVLRGTKQGVILQFGKVSDKLFHLDFRHPLTPFQAFAIALCQFNF 349
BLAST of mRNA_Ecto-sp13_S_contig13695.2907.1 vs. uniprot
Match: A0A482S955_9ARCH (Tub domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S955_9ARCH) HSP 1 Score: 190 bits (483), Expect = 4.320e-55 Identity = 107/251 (42.63%), Postives = 150/251 (59.76%), Query Frame = 1
Query: 232 LMLSYERGNNSDLVQCVVVRDRSGMN-RLYPQYRFFFEGRGDQLMMVAQKCSKNRTSNYHVFDMNRGGFQTRLSKKNGNYLGKVRT-NLKRTEAIVFTNDQAIAELGAISFEKPGLVDHLRDGSQPRKFTVLLPALDCDGSPVAHKVDPYDADSDMLSRM-------KQGRHGNMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDDTLHTVCQFGKVGEDRFHLDYRAPINAFQALCISIAQFN 957
+++++ RG + +QC VVRDR+ + +LYP Y E + ++ A K S NRTSNYH+FDM RG ++LSKK GNYLGK+R N R E + + EL +SFEK L++ L +G+QPRK +L+ D + V P + S LS + K+ NM LL+++EP GNYRLNF GRV +PSVKNFQ+V + +CQFGKV ED FHLD++ P NA +A +++ QFN
Sbjct: 2 VLVAHPRGVRNQHIQCTVVRDRNSVGGKLYPSYELILEN-PRKTIIKACKMSYNRTSNYHLFDMTRGTAGSKLSKKAGNYLGKLRARNTNRLECSLLNHKADKEELMGVSFEKMTLINQLTEGTQPRKMRILILRPDV-VTGTTEGVYPSNFGSPSLSDLLLDVVDRKKSLPENMMLLETKEPVLENGNYRLNFFGRVNLPSVKNFQIVHYSNIDEILCQFGKVEEDMFHLDFKTPFNALEAFALALCQFN 250
BLAST of mRNA_Ecto-sp13_S_contig13695.2907.1 vs. uniprot
Match: T0Q607_SAPDV (Tub domain-containing protein n=3 Tax=Saprolegnia TaxID=4769 RepID=T0Q607_SAPDV) HSP 1 Score: 191 bits (486), Expect = 4.300e-54 Identity = 104/231 (45.02%), Postives = 145/231 (62.77%), Query Frame = 1
Query: 268 LVQCVVVRDRSGMNRLYPQYRFFFEGRGDQLMMVAQKCSKNRTSNYHVFDMNRGGFQTRLSKKNGNYLGKVRTNLKRTEAIVFTNDQAIAELGAISFEKPGLVDHLRDGSQPRKFTVLLPALDCDGSPVAHKVDPYDADSDMLSRMKQGRHGNMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDDTLHTVCQFGKVGEDRFHLDYRAPINAFQALCISIAQFNF 960
L + +VR G NRL PQY+FF + ++L+++AQK NRTSNYH+FDM+RG +LSKK+GNY+GK+R++ R E ++ + ELGAI FE H S+PRK TV+ P L G DA S + ++K GR ++ +L +++P Y KG YRLNF+GRV+VPSVKNFQLV + QFGKV + FHLD+R P+ FQA I+++QFN+
Sbjct: 150 LTEGSIVRCNHGANRLTPQYQFFIK---NKLVLLAQKQLNNRTSNYHIFDMSRGAASYKLSKKSGNYIGKLRSSFGRQENVMISAQAEKRELGAILFETK--TSH----SKPRKLTVICPGLTSSGE-AKSVPSKGDAFSSLAEQVKLGRTSDLVILDNKDPEYEKGCYRLNFNGRVSVPSVKNFQLVLRGTKQGVILQFGKVSDKLFHLDFRHPMTPFQAFSIALSQFNY 370 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13695.2907.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13695.2907.1 >prot_Ecto-sp13_S_contig13695.2907.1 ID=prot_Ecto-sp13_S_contig13695.2907.1|Name=mRNA_Ecto-sp13_S_contig13695.2907.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=282bp MATGRCGGDETTEEDGGRGKDSWASIVEGGRSPARCNSLMLSYERGNNSDback to top mRNA from alignment at Ecto-sp13_S_contig13695:2..3151+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13695.2907.1 ID=mRNA_Ecto-sp13_S_contig13695.2907.1|Name=mRNA_Ecto-sp13_S_contig13695.2907.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3150bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13695:2..3151+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13695:2..3151+ >mRNA_Ecto-sp13_S_contig13695.2907.1 ID=mRNA_Ecto-sp13_S_contig13695.2907.1|Name=mRNA_Ecto-sp13_S_contig13695.2907.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=846bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13695:2..3151+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |