mRNA_Ecto-sp13_S_contig13691.2905.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13691.2905.1
Unique NamemRNA_Ecto-sp13_S_contig13691.2905.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13691.2905.1 vs. uniprot
Match: A0A6H5JZG6_9PHAE (HRDC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZG6_9PHAE)

HSP 1 Score: 533 bits (1373), Expect = 6.080e-186
Identity = 271/288 (94.10%), Postives = 277/288 (96.18%), Query Frame = 1 
Query:   22 MGTKRGTDRVYNAAMKPSFGKGKERGKTETFWKALFHQLVERQGFLEAVSFSSDNGGRSGTTYRLTRQGRSFLQATKEKLPMSFTPSDELATEGRRFRTAAARPADGYPQANAARHGLSEEEQKVHALLLNLRKEIADRTGEMPYNVMGGAVVRELSKRRPVDLATLTSVGGMGETKINKYGAEIIEVLKAACADLKLESNVAAAPAQEAPWLTTSREDRPLTSVQQLAHEAYTRQASLTLEQVAARMPRAVAIGTFTGHLAACLEAGLTFAWDRRRLGIDLGLERKV 885
            MGTKRGTDRVYNA MKPSFG+GKERGKTETFWKALFHQLVERQGFLEAVSFSS+NGGRSGTTYRLTR+GRSFLQ TKEKLPMSFTPSDELATEGRRFRTAAARPADGYPQ NAARHGLSEEEQKVHALLLNLRK+IADRTGEMPYNVMGGAVVRELSKRRPVDLATLTSVGGMGETKINKYGAEIIEVLKAACADLKLESNVAAAP QEAPWLTTSRED PLTSVQQLAHEAY RQ SLTLEQVAARMPR VAIGTF GHLAACL+AGLTFAWDRRRLGIDL LE K+
Sbjct:    1 MGTKRGTDRVYNATMKPSFGRGKERGKTETFWKALFHQLVERQGFLEAVSFSSENGGRSGTTYRLTRKGRSFLQVTKEKLPMSFTPSDELATEGRRFRTAAARPADGYPQTNAARHGLSEEEQKVHALLLNLRKKIADRTGEMPYNVMGGAVVRELSKRRPVDLATLTSVGGMGETKINKYGAEIIEVLKAACADLKLESNVAAAPVQEAPWLTTSREDEPLTSVQQLAHEAYMRQDSLTLEQVAARMPRPVAIGTFAGHLAACLQAGLTFAWDRRRLGIDLDLELKI 288
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BLAST of mRNA_Ecto-sp13_S_contig13691.2905.1 vs. uniprot
Match: D7G9E9_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E9_ECTSI)

HSP 1 Score: 374 bits (961), Expect = 4.590e-124
Identity = 188/194 (96.91%), Postives = 192/194 (98.97%), Query Frame = 1 
Query:    1 SVPIGLLMGTKRGTDRVYNAAMKPSFGKGKERGKTETFWKALFHQLVERQGFLEAVSFSSDNGGRSGTTYRLTRQGRSFLQATKEKLPMSFTPSDELATEGRRFRTAAARPADGYPQANAARHGLSEEEQKVHALLLNLRKEIADRTGEMPYNVMGGAVVRELSKRRPVDLATLTSVGGMGETKINKYGAEIIE 582
            +VPIGLLMGTKRGTDRV+NAAMKPSFGKGKERGKTETFWKALFHQLVERQGFLEAVSFSSDNGGRSGTTYRLTRQGRSFLQATKEKLPMSFTPSDELATEGRRFRTAAARPADGYPQ NAAR+GLSEEEQKVHALLLNLRKEIADRTGEMPYNVMGGAVV+ELSKRRPVDL TLTSVGGMGETKINKYGAEIIE
Sbjct:  366 TVPIGLLMGTKRGTDRVHNAAMKPSFGKGKERGKTETFWKALFHQLVERQGFLEAVSFSSDNGGRSGTTYRLTRQGRSFLQATKEKLPMSFTPSDELATEGRRFRTAAARPADGYPQTNAARNGLSEEEQKVHALLLNLRKEIADRTGEMPYNVMGGAVVKELSKRRPVDLTTLTSVGGMGETKINKYGAEIIE 559
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BLAST of mRNA_Ecto-sp13_S_contig13691.2905.1 vs. uniprot
Match: D7G9F0_ECTSI (HTH_40 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9F0_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 1.790e-51
Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 1 
Query:  583 VLKAACADLKLESNVAAAPAQEAPWLTTSREDRPLTSVQQLAHEAYTRQASLTLEQVAARMPRAVAIGTFTGHLAACLEAGLTFAWDRRRLGIDLGLERKV 885
            VLKAACADLKLESNVAAAPAQEAPWLTTSREDRPLTSVQQLAHEAY RQ SLTLEQVAARMPR VAIGTF GHLAACLEAGLTFAWDRRRLGIDL LERK+
Sbjct:    2 VLKAACADLKLESNVAAAPAQEAPWLTTSREDRPLTSVQQLAHEAYMRQDSLTLEQVAARMPRPVAIGTFAGHLAACLEAGLTFAWDRRRLGIDLDLERKI 102
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BLAST of mRNA_Ecto-sp13_S_contig13691.2905.1 vs. uniprot
Match: A0A6G9ICH7_9GAMM (DNA helicase n=1 Tax=Zophobihabitans entericus TaxID=1635327 RepID=A0A6G9ICH7_9GAMM)

HSP 1 Score: 70.1 bits (170), Expect = 8.620e-10
Identity = 58/198 (29.29%), Postives = 91/198 (45.96%), Query Frame = 1 
Query:   10 IGLLMGTKRGTDRVYNAAMKPSFGKGKERGKTETFWKALFHQLVERQGFL--EAVSFSSDNGGRSGTTYRLTRQGRSFLQATKE---KLPMSFTPSDELATEGRRFRTAAARPADGYPQANAARHGLSEEEQKVHALLLNLRKEIADRTGEMPYNVMGGAVVRELSKRRPVDLATLTSVGGMGETKINKYGAEIIEVL 588
            + +L G      R +       +G GKE  KT  FW ++  QLV   GFL  +  ++S+          +LT   R  L+   E    +P       E    GR               ++AA   L+++E+ + A L  LRK +AD +G  PY V   A + E+ +  P + + L S+ G+G++K+ KYGAE IEV+
Sbjct:  428 VDVLRGANNARIRDFGHNKLSVYGIGKE--KTSDFWISIIRQLVHL-GFLVQDITAYSA---------LKLTEAARPVLKGDVELSLAVPRLEIVKKEKVRNGR---------------SSAATSLLTDQEKVLFANLRRLRKSLADESGVPPYVVFSDATLFEMVQYLPTNPSALLSISGVGQSKLEKYGAEFIEVI 598
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BLAST of mRNA_Ecto-sp13_S_contig13691.2905.1 vs. uniprot
Match: W0E7T7_9FIRM (DNA helicase n=1 Tax=Desulfitobacterium metallireducens DSM 15288 TaxID=871968 RepID=W0E7T7_9FIRM)

HSP 1 Score: 69.3 bits (168), Expect = 1.670e-9
Identity = 48/162 (29.63%), Postives = 77/162 (47.53%), Query Frame = 1 
Query:  388 QKVHALLLNLRKEIADRTGEMPYNVMGGAVVRELSKRRPVDLATLTSVGGMGETKINKYGAEIIEVLKAACADLKLESNVAAAPAQEAPWLTTSREDRPLTSVQQLAHEA-----YTRQASL-----TLEQVAARMPRAVAIGTFTGHLAACLEAGLTFAWD 843
            Q +   L  LR  +A R    PY V   + +RE+++  P+DLA    +GG+GE K+ KYGAE IE + A   + +  +        +    T S ++R   +++ + H +     Y +   L     TLE++A  + R + I T   HL  C E G T  W+
Sbjct:  519 QSLFERLRLLRHNLASRENLPPYMVFSDSTLREMAENLPIDLAGFIRIGGVGEKKLEKYGAEFIEEISAYLLEKQAMAGDQVQELHDVVQQTNSNQERISHNLEPVTHPSVKIPSYIQTLELLQQGKTLEEIA--VLRKLTISTVQDHLIRCHEEGHTIPWE 678
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BLAST of mRNA_Ecto-sp13_S_contig13691.2905.1 vs. uniprot
Match: A0A2N6ET78_9DELT (DNA helicase n=1 Tax=Desulfuromonas sp. TaxID=892 RepID=A0A2N6ET78_9DELT)

HSP 1 Score: 66.6 bits (161), Expect = 1.210e-8
Identity = 63/197 (31.98%), Postives = 88/197 (44.67%), Query Frame = 1 
Query:   10 IGLLMGTKRGTDRVYNAAMKPSFGKGKERGKTETFWKALFHQLVERQGFLEA--VSFSSDNGGRSGTTYRLTRQGRSFLQATKEKLPMSFTPSDELATEGRRFRTAAARPADGYPQANAARHGLSEEEQKVHALLLNLRKEIADRTGEMPYNVMGGAVVRELSKRRPVDLATLTSVGGMGETKINKYGAEIIEVLKA 594
            I +L G K  T R+ +         G  RG+++  W  L  QLV   G+LE    +FS           RLT   R  L+   E L +S  P  +    G+R R                  GL  +E+ +  LL   RK IADR G  P+ V G A + E++   P D  T+  + G+GE K+ KYGAE IE ++A
Sbjct:  428 IDVLRGAK--TQRLLDLQHDQLSTYGIGRGQSQDQWSHLLRQLVHL-GYLEQDIANFS---------VLRLTESARPLLRGEAE-LTLS-RPRLKPVAAGKRTRKQIV--------------GLDYDEE-LFGLLRGRRKRIADRAGVPPFVVFGDASLAEMAAILPTDAKTMLEINGVGEHKLEKYGAEFIEEIQA 595
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BLAST of mRNA_Ecto-sp13_S_contig13691.2905.1 vs. uniprot
Match: C0GGZ5_9FIRM (DNA helicase n=1 Tax=Dethiobacter alkaliphilus AHT 1 TaxID=555088 RepID=C0GGZ5_9FIRM)

HSP 1 Score: 65.1 bits (157), Expect = 3.890e-8
Identity = 31/69 (44.93%), Postives = 43/69 (62.32%), Query Frame = 1 
Query:  382 EEQKVHALLLNLRKEIADRTGEMPYNVMGGAVVRELSKRRPVDLATLTSVGGMGETKINKYGAEIIEVL 588
            ++  + A L  LRKEIADR    PY V   A +RE+S+RRP D  +L  + G+GE K+ KYGA  I+ +
Sbjct:  516 KDDNLFAQLRRLRKEIADRENIPPYVVFSDATLREMSERRPADSQSLLRINGVGEKKLEKYGAHFIDAI 584
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BLAST of mRNA_Ecto-sp13_S_contig13691.2905.1 vs. uniprot
Match: A0A6H9HHM7_9PROT (DNA helicase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6H9HHM7_9PROT)

HSP 1 Score: 65.1 bits (157), Expect = 3.940e-8
Identity = 51/174 (29.31%), Postives = 81/174 (46.55%), Query Frame = 1 
Query:   73 SFGKGKERGKTETFWKALFHQLVERQGFLEAVSFSSDNGGRSGTTYRLTRQGRSFLQATKEKLPMSFTPSDELATEGRRFRTAAARPADGYPQANAARHGLSEEEQKVHALLLNLRKEIADRTGEMPYNVMGGAVVRELSKRRPVDLATLTSVGGMGETKINKYGAEIIEVLKA 594
            ++G GK+ G+ E  W ++  QL+ R   ++ ++  S          RLT   R  L+   +          ELA   RR +   A  A G          LS  +  +   L +LR+E+A + G  PY V G   + E+S+ RP D   L  + G+G+ K+ +YGA  +EVL+A
Sbjct:  455 TWGIGKDLGEAE--WMSILRQLIHRGYLVQDIANYS--------VLRLTEAARPLLRGEMQL---------ELARPPRREKATKAGSATGRSAL-----ALSAADLPLFEALRSLRRELAAQQGVPPYVVFGDVTLVEMSQARPRDEDELLCITGVGQVKLERYGAAFLEVLRA 604
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BLAST of mRNA_Ecto-sp13_S_contig13691.2905.1 vs. uniprot
Match: A0A1X1QPM9_9GAMM (DNA helicase n=1 Tax=Cycloclasticus sp. symbiont of Poecilosclerida sp. N TaxID=1840472 RepID=A0A1X1QPM9_9GAMM)

HSP 1 Score: 65.1 bits (157), Expect = 4.180e-8
Identity = 69/273 (25.27%), Postives = 116/273 (42.49%), Query Frame = 1 
Query:   10 IGLLMGTKRGTDRVYNAAMKPSFGKGKERGKTETFWKALFHQLVERQGFLEAVSFSSDNGGRSGTTYRLTRQGRSFLQATKEKLPMSFTPSDELATEGRRFRTAAARPADGYPQANAARHGLSEEEQKVHALLLNLRKEIADRTGEMPYNVMGGAVVRELSKRRPVDLATLTSVGGMGETKINKYGAEIIEVLKAACADLKLESNVAAAPAQEAPWLTTSREDRPLTSVQQLAHEAYTRQASLTLEQVAARMPRAVAIGTFTGHLAACLEAGL 828
            I +L G + G  +  +     +FG GKE   TE  W+ +F QL+     L  +S  +++ G    + +LT+Q R  L+  K+         + L+ E  + +   ARP D                + +   L  LR ++A+  G  PY +     ++E+ K+RP+ LA +  + G+GE KI +YG   +  +     D +L +N  +A   E   L                      Q  +T+E +A +  R +      GHLA  +EAGL
Sbjct:  429 IDVLRGKEDGRIQQNSHDQLSTFGIGKELSVTE--WRTVFRQLIA----LGYISVEAESHG----SLKLTKQSRPVLRGEKKLELRKQRKEESLSKE--KSKKKPARPQD----------------EPLWEALRALRLQLAEEAGVPPYVIFHDTTLQEMIKKRPIILADMRYISGVGEQKIKRYGKRFLAEIAKYPLD-ELFNNHLSATVNETLILY---------------------QTGMTIEDIAKQ--RELKQNNVYGHLADAIEAGL 649
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BLAST of mRNA_Ecto-sp13_S_contig13691.2905.1 vs. uniprot
Match: A0A7C2FEK6_9PROT (DNA helicase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7C2FEK6_9PROT)

HSP 1 Score: 64.3 bits (155), Expect = 6.920e-8
Identity = 63/196 (32.14%), Postives = 89/196 (45.41%), Query Frame = 1 
Query:   10 IGLLMGTKRGTDRVYNAAMKPSFGKGKERGKTETFWKALFHQLVERQGFLEAVSFSSDNGGRSGTTYRLTRQGRSFLQATKEKLPMSFTPSDELATEGRRFRTAAARPADGYPQANAARHGLSEEEQKVHALLLNLRKEIADRTGEMPYNVMGGAVVRELSKRRPVDLATLTSVGGMGETKINKYGAEIIEVLKAA 597
            I +L+G      R +      +FG G E G  E  W+ +F QL+ R G L     S D  G      RL+ + R  L+             DE     R  R A AR A   P+A        E++Q++   L   R+E+A R    PY V   A + E+ +RRP  LA L  V G+GE K+  YGA+ ++V+ AA
Sbjct:  396 IDVLLGKDDERIRRFGHDRSSTFGIGAELGARE--WRGVFRQLIAR-GLL-----SVDLEGHGAL--RLSERCRPVLRG------------DERLLLRRESRAAVARIAK-TPRAAFT----LEDDQRLWEALRRRRRELAARQNVPPYVVFHDATLTEMVQRRPRSLAELAEVSGVGERKLEVYGADFLKVILAA 564
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13691.2905.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZG6_9PHAE6.080e-18694.10HRDC domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G9E9_ECTSI4.590e-12496.91ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more]
D7G9F0_ECTSI1.790e-5194.06HTH_40 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6G9ICH7_9GAMM8.620e-1029.29DNA helicase n=1 Tax=Zophobihabitans entericus Tax... [more]
W0E7T7_9FIRM1.670e-929.63DNA helicase n=1 Tax=Desulfitobacterium metallired... [more]
A0A2N6ET78_9DELT1.210e-831.98DNA helicase n=1 Tax=Desulfuromonas sp. TaxID=892 ... [more]
C0GGZ5_9FIRM3.890e-844.93DNA helicase n=1 Tax=Dethiobacter alkaliphilus AHT... [more]
A0A6H9HHM7_9PROT3.940e-829.31DNA helicase n=1 Tax=Proteobacteria bacterium TaxI... [more]
A0A1X1QPM9_9GAMM4.180e-825.27DNA helicase n=1 Tax=Cycloclasticus sp. symbiont o... [more]
A0A7C2FEK6_9PROT6.920e-832.14DNA helicase n=1 Tax=Alphaproteobacteria bacterium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13691contigEcto-sp13_S_contig13691:4..4562 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score363.6
Seed ortholog evalue8.4e-98
Seed eggNOG ortholog2880.D7G9E9
Model size885
KEGG koko:K03654
KEGG Pathwayko03018,map03018
Hectar predicted targeting categoryother localisation
GOsGO:0000287,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008408,GO:0009987,GO:0016787,GO:0016788,GO:0030145,GO:0031974,GO:0031981,GO:0034641,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:1901360
Exons7
EggNOG free text desc.four-way junction helicase activity
EggNOG OGsCOG0514@1,KOG0351@2759
Ec32 ortholog descriptionDEAD box helicase
Ec32 orthologEc-28_000690.1
EC3.6.4.12
Cds size864
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13691.2905.1prot_Ecto-sp13_S_contig13691.2905.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13691 4..4541 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462730.8278136-CDS-Ecto-sp13_S_contig13691:3..1581681462730.8278136-CDS-Ecto-sp13_S_contig13691:3..158Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13691 4..158 -
1681462730.8403194-CDS-Ecto-sp13_S_contig13691:1051..11131681462730.8403194-CDS-Ecto-sp13_S_contig13691:1051..1113Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13691 1052..1113 -
1681462730.8505182-CDS-Ecto-sp13_S_contig13691:1660..17461681462730.8505182-CDS-Ecto-sp13_S_contig13691:1660..1746Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13691 1661..1746 -
1681462730.8613546-CDS-Ecto-sp13_S_contig13691:2599..27731681462730.8613546-CDS-Ecto-sp13_S_contig13691:2599..2773Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13691 2600..2773 -
1681462730.8724084-CDS-Ecto-sp13_S_contig13691:3452..36081681462730.8724084-CDS-Ecto-sp13_S_contig13691:3452..3608Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13691 3453..3608 -
1681462730.8806345-CDS-Ecto-sp13_S_contig13691:3757..38571681462730.8806345-CDS-Ecto-sp13_S_contig13691:3757..3857Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13691 3758..3857 -
1681462730.8909204-CDS-Ecto-sp13_S_contig13691:4410..45411681462730.8909204-CDS-Ecto-sp13_S_contig13691:4410..4541Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13691 4411..4541 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462730.9003942-UTR-Ecto-sp13_S_contig13691:4541..45621681462730.9003942-UTR-Ecto-sp13_S_contig13691:4541..4562Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig13691 4542..4562 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13691.2905.1

>prot_Ecto-sp13_S_contig13691.2905.1 ID=prot_Ecto-sp13_S_contig13691.2905.1|Name=mRNA_Ecto-sp13_S_contig13691.2905.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=288bp
MGTKRGTDRVYNAAMKPSFGKGKERGKTETFWKALFHQLVERQGFLEAVS
FSSDNGGRSGTTYRLTRQGRSFLQATKEKLPMSFTPSDELATEGRRFRTA
AARPADGYPQANAARHGLSEEEQKVHALLLNLRKEIADRTGEMPYNVMGG
AVVRELSKRRPVDLATLTSVGGMGETKINKYGAEIIEVLKAACADLKLES
NVAAAPAQEAPWLTTSREDRPLTSVQQLAHEAYTRQASLTLEQVAARMPR
AVAIGTFTGHLAACLEAGLTFAWDRRRLGIDLGLERKV
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mRNA from alignment at Ecto-sp13_S_contig13691:4..4562-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13691.2905.1 ID=mRNA_Ecto-sp13_S_contig13691.2905.1|Name=mRNA_Ecto-sp13_S_contig13691.2905.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4559bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13691:4..4562- (Ectocarpus species13 EcNAP12_S_4_19m)
TCAGTGCCGATCGGTCTGCTGATGGGGACCAAGAGGGGAACGGACCGGGT
GTACAACGCCGCCATGAAGCCGTCGTTCGGCAAGGGCAAAGAGAGAGGCA
AGACGGAGACGTTCTGGAAGGCCTTGTTCCACCAACTCGTCGAGAGGCAG
GGGTGAGTAGGGCGATCGCCCGCCTCAGGGGTGTCAACGAACGGCGCCAT
CCTCATCTTGGTCAAGTTGAGTCGGGCAAGTGGCGTCGTCGTGTCGTCAA
TTTTTCGGGCGGCGCCGTCAAACGTGACGGTCGAAGCGATGACAGGGCCC
ATGTCATCGTACCGTGGGTTATGTCCCCCTGAGCCCCTGGTTCTCTTTGG
AAGAAGTCAGAGGACATTTTGAGTGTTTTATGTTGTGAGTGTTTAAAGTC
CCGCCGCATCGCATCAAACCGTTTTGATATCTGGTGGTGATGGTCGTGCC
CCCCACCCCTTCCCGTATGATGATTTTCGGTGTTGTAACTTCTGCTTTTC
GCTGTTCGTGTAGTGTTCTCGCTGCTGAAGTTGGCGTGGTTGTAGATTGT
TGGTAGTCCCGGTGCTGTTGCTTCCCCGTCCCTCCCGTATGTCGACTTTG
TCACTGTCCTTTTAGTACCAGGCACTGCTGTCTTGTGTACCATATTGCTC
TCGCGGCTGAAGTTGGTATGGTTGTTGGTAAACTACGGTGCCGGTGCTGC
CGCAGGTTCCTTGAAGCGGTGTCGTTCTCGAGCGACAACGGCGGGCGGAG
CGGGACGACCTACCGCTTGACCCGCCAGGGGAGGAGCTTCCTCCAGGCCA
CCAAGGTTTGCTCGTTCTGTCATTGCCGTTTTCGACATGCGTTTGCATGA
GTGCCACCCTGCCCCCTCCCACCATCATTGTCGACGGTCTAACGGCTAAG
GCATGCAAAACATGACTACGCCCCCTCCCGCCCTCTCTCTGTTTATCTAT
ATAGGAGAAGCTCCCCATGTCTTTCACGCCTTCCGATGAACTGGCGACGG
AAGGGAGGCGCTTTAGAACGGCCGCCGCGCGTCCCGCGGACGGCTACCCG
CAGGCCAACGCCGCACGCCACGGACTCTCCGAGGAAGAGCAGAAAGTGCA
CGCGCTCCTGGTACGTGCGTGCGATTTCTTTTCAGAAAATGTTTGCGTAC
GAAAAGACTCATGTGCTGAGGTCTTAACAGCAGTGAGTGGGGTTGTTGTG
GGGCACCCACGGACTGCTAAGAGTAAAAGTACGCTCCTTTATGACCAACT
AGTGCTACCCCCCTGACCCAGATAATTTAGTGCTCTGCAGCGCTTGTATA
CAGATGACCCTCCCGCACTGAGGACGTTGGCAGCTACTAATAAGGTGCAC
TGAGGACCTTGGCAGCTACTAATAAGATCTTGATGCTTAACATTTGATCG
AAGTAAGAACTTGAGCACCATATATGAGCCCGATTAAGAATTCCTACCCT
TAACCCGATGCAAAAAAGGCACGGAAAACCCTAGCGTCGACCAATGCTAG
AGGTCCTGAAGGGTGGACGCTCTCTGTATGTGTGTCATCGCAGAACTCCC
TGACCATATTGGCCTACCCTGACAATTTTGGTGCTTAGGCGCTCGTACAG
TACGCATACACGACCGCAGCGCTTTCCCTCAGGCTCACATGTTGATGTTC
TTCCCGTACACATCCCGCGGCCGTTGTTTGTCCACACGCGCTTTTTTATT
CTTCTTTCCCGCATGGTCATGGTGTGCACCCATCCCCTCCCCCCCCCACA
CACACACCCGGATGTCGATCGTGATGTACCATGAAACAGCTAAACCTCAG
GAAGGAGATAGCGGATCGCACGGGCGAGATGCCGTACAACGTCATGGGGG
GCGCCGTGGTGAGGGAGCTGTCGAAGAGGAGGCCGGTCGACCTCGCCACG
CTCACGTCGGTGGGCGGCATGGGGGAGACGAAGATTAACAAGTACGGGGC
TGAGATCATTGAGGTGAGGAGGGCGAGGGGGGGTTGCTCATAGTCGTGCA
TGCCGTAGTCGTTAGACCATTGACTTCGTATCCCTAGAAAGCCAGGACGG
AGCACGCCGAGTTCTAACCGGACCAGGTTTCACATCACCAAGCGCGAAGC
GCCGTGAGATAGTCGGCGAGTCTCATAAAGGGTGCACGGCATCCTGCTAA
GGGTGTCCGGCATCTTGTGCTTAATTCCTTGCGTACGGATGACAGCTGCG
TATGACTTAATTTATTTTCTGGTGCTTTCGCTTCCAGAGACAGTTGTAAG
CACTGTGCAACTGCCTCGAGGGTGCTTGACAATTTTAACACAACGTGGTG
CGATAAGCCCCTTTGCGCCGAGTGAGGGTTATCAACCCCGCACAACATGA
TCTGCTCGACCACCATTTATGGGGGGGGGGCATTTCGACGGAGGTGTACC
GCTTCTTGCTTGTACCGTAGTCGTTGACGCGGCCGCTCTGTGTACATACA
GCACGCCTTTCGGCGTGGAAGACCACGGTTCCTCTTAGGGCAGACGCCGG
CCTATGATTGGGTGATGTTTCAACGTTTTTGGTTCCCTATGGCGATGTGC
CCCTTGTCGGCTGCCCTTTCGTGTGCGCCGCCGATTTGTGTTTCCCGTTT
TTTTTTTCATGTCGATACATCCCGTGATTGGGTCACGACGGCCGCCCTTT
AGTGTTTGCCTCCGTTCCCGAAGGGGTGGGGTTGGGATATTGCGTAGCTA
GCGGTATTCACGGAAAGGGTTGATGCACCCGTTCAACGAACATTCCCCAT
TCTGCCATCATTCCTTGCGTTTTGCGGGGGATGGACTCAACCTCCCTTGG
TTAATGAACTCCGCAGGTGCTGAAGGCGGCGTGTGCTGACCTGAAGCTGG
AGAGCAACGTGGCCGCGGCGCCCGCGCAGGAGGCTCCGTGGCTGACAACA
TCGTGAGCTCCGTTTTAGCCCCCCCCCCTGTGTTGTGTGTACCCCTCTTT
TTTTTTTTTTTTTAATTTTTTTAGTGAAAACTTAAGCTTCGTGAGCTTCG
TTGCAGTTTTGTGTAAGGTGTGTTGGCTTTGACATGACAGCATCATCGTG
AGTTTCGTTCCAGTTTGGTGCACGTTTTTGTTTCCATGCTGGTTCTGACG
CGTCGGCGTAGGCGGGCGTGAGGCGGCGCTCGCACAAAGTAGGCCGCCAG
TCGTTGGACTTGAGACGAAAAAGGAGTATTAATAGGGAGGGGAAGGGAAC
TTTTTGTTTTTTTTGCTTGACGATTTCGTGTGACAACCAACCCAGCAGCA
TGATTGGACCCGGCTTCGGTCAGAGACACGGATGGGTGGGAGCGCTCGTC
CTGCTAGACGCGAGGCCCTCTCTACCTCTTGAAACCTGGTTACTGCCGTT
TGTGTCGACATCTTGCTTTTGATTTTTGTTTTGCAATCGATCCACGGAAC
CCCCCCAACCCCTTGCCGCCGTCGGTACACGCGCTCTCGATTTTGACAGG
CGGGAAGACAGGCCGTTGACTTCGGTGCAGCAACTTGCCCATGAGGCTTA
CACGAGACAAGGTCTGCAGTTGATTTTCCGAAACCGCTGCTCCTTATTGT
TTTGTTTTTCTAGAAAATGTGGAGCAGTATCATATAATATACTTCGAAGT
ATCCCCTTTCGTTTTCATGTCGCACCCCAACGAAGCATCCACGTGACAGG
GTCAGCACGTCAGCACACAATTTTCAAATCTTCCGATTTGTTGTTTGGTG
TCTTGTTGAATATCTGGTACACTCAGGCGTTCAACCAGGCCGGCCGTGAC
TTCCAACCGAAGTCACTTTTTCGCGGCTGGTTGGACGCAGTGTACGGTTT
CCTTGAATCTCTTCGTAATTCGTCGGATTCAAAGGCACGCTTTAGACCTA
GACGTGGTGGCGTATGCATATTTCGCACGAATTGTTGTGCTGATCGTCTC
CTTATTCCCGGGGCCTCCGTGGACGCTGTTCATACCGCGGTGGTTTCAAT
TCCAGACAAGACCGCACACTCATCTCTTTCGCTAGGGATTACCCATCCCG
CGTGAATCAAGCTCTATCTGTATTCCAGGCCCTAGTTTCGTTTCCGTCAG
CCAAATTTCGGCGTAACAGTTTTACCTTTTCGACTTGACCTAATTAACTA
GTATTCACAACCACAAGACCTGTCACGTGTGTTACTCTCCCGGATATCGT
TTCCGAACCTCACAATGCCTCCGAAAACAGTTATGGTCGCTCTCTATCGT
GGTCCTCACTTGTGTTCTTCGGCAGGCCATGGGTTCATTTCCATCAGCCA
CCTTTCCACATGTCCAGTGTGTTGCTCTCCCAGAAACAAATCGCTTCCGA
ACCTCACGCAATGCCTAAAAAGACGTGTACGGTCGCTCTCTCTCTCTTTC
TCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTGGTGGTT
TCAGCCTCCCTGACGCTGGAACAGGTGGCCGCCAGGATGCCGCGAGCGGT
GGCTATTGGGACGTTCACGGGACACCTTGCGGCGTGCTTGGAGGCAGGCT
TGACGTTCGCGTGGGACCGCCGGCGCCTCGGCATCGACCTTGGCCTGGAG
CGCAAGGTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13691:4..4562-

>mRNA_Ecto-sp13_S_contig13691.2905.1 ID=mRNA_Ecto-sp13_S_contig13691.2905.1|Name=mRNA_Ecto-sp13_S_contig13691.2905.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=864bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13691:4..4562- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGGACCAAGAGGGGAACGGACCGGGTGTACAACGCCGCCATGAAGCC
GTCGTTCGGCAAGGGCAAAGAGAGAGGCAAGACGGAGACGTTCTGGAAGG
CCTTGTTCCACCAACTCGTCGAGAGGCAGGGGTTCCTTGAAGCGGTGTCG
TTCTCGAGCGACAACGGCGGGCGGAGCGGGACGACCTACCGCTTGACCCG
CCAGGGGAGGAGCTTCCTCCAGGCCACCAAGGAGAAGCTCCCCATGTCTT
TCACGCCTTCCGATGAACTGGCGACGGAAGGGAGGCGCTTTAGAACGGCC
GCCGCGCGTCCCGCGGACGGCTACCCGCAGGCCAACGCCGCACGCCACGG
ACTCTCCGAGGAAGAGCAGAAAGTGCACGCGCTCCTGCTAAACCTCAGGA
AGGAGATAGCGGATCGCACGGGCGAGATGCCGTACAACGTCATGGGGGGC
GCCGTGGTGAGGGAGCTGTCGAAGAGGAGGCCGGTCGACCTCGCCACGCT
CACGTCGGTGGGCGGCATGGGGGAGACGAAGATTAACAAGTACGGGGCTG
AGATCATTGAGGTGCTGAAGGCGGCGTGTGCTGACCTGAAGCTGGAGAGC
AACGTGGCCGCGGCGCCCGCGCAGGAGGCTCCGTGGCTGACAACATCGCG
GGAAGACAGGCCGTTGACTTCGGTGCAGCAACTTGCCCATGAGGCTTACA
CGAGACAAGCCTCCCTGACGCTGGAACAGGTGGCCGCCAGGATGCCGCGA
GCGGTGGCTATTGGGACGTTCACGGGACACCTTGCGGCGTGCTTGGAGGC
AGGCTTGACGTTCGCGTGGGACCGCCGGCGCCTCGGCATCGACCTTGGCC
TGGAGCGCAAGGTG
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