mRNA_Ecto-sp13_S_contig13689.2904.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13689.2904.1 vs. uniprot
Match: D7G169_ECTSI (Pyridoxal kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G169_ECTSI) HSP 1 Score: 133 bits (334), Expect = 1.630e-34 Identity = 72/105 (68.57%), Postives = 74/105 (70.48%), Query Frame = 1
Query: 22 LFSIQSHVVRGYVGNKCSVFPLQLLGFDVDPVNSVQFSNHTGASLVVTMVVNVGSDHTAGRETLMWSLAAHPWFEGTVLQGEELSRLLQGLESNNLLRGYTHVLT 336
+ SIQSHVVRGYVGNKCSVFPLQLLGFDVDPVNSVQFSNHTG + FEGTVLQGEELSRLLQGLESNNLLRGYTHVLT
Sbjct: 7 VLSIQSHVVRGYVGNKCSVFPLQLLGFDVDPVNSVQFSNHTG----------------------------YAGFEGTVLQGEELSRLLQGLESNNLLRGYTHVLT 83
BLAST of mRNA_Ecto-sp13_S_contig13689.2904.1 vs. uniprot
Match: UPI0009C01FA9 (pyridoxal kinase isoform X8 n=2 Tax=Amborella trichopoda TaxID=13333 RepID=UPI0009C01FA9) HSP 1 Score: 114 bits (286), Expect = 9.700e-29 Identity = 62/113 (54.87%), Postives = 80/113 (70.80%), Query Frame = 1
Query: 1 LPSYSISLFSIQSHVVRGYVGNKCSVFPLQLLGFDVDPVNSVQFSNHTGASLVVTMVVNVGSD-HTAGRETLMWSLAAHPWFEGTVLQGEELSRLLQGLESNNLLRGYTHVLT 336
LPS + + SIQSH V+GYVGNK ++FPLQLLGFDVDP+NSVQFSNHTG L +T V + + + R+ W A +P F G VL G++L L++GLE+N LL YTH+LT
Sbjct: 40 LPSGTGRVLSIQSHTVQGYVGNKSAIFPLQLLGFDVDPINSVQFSNHTGKQLYITSVSQLRAPIYICMRK---WDGAGYPTFRGQVLDGQQLWDLIEGLEANGLLF-YTHLLT 148
BLAST of mRNA_Ecto-sp13_S_contig13689.2904.1 vs. uniprot
Match: UPI0009BF7BE9 (pyridoxal kinase isoform X3 n=2 Tax=Amborella trichopoda TaxID=13333 RepID=UPI0009BF7BE9) HSP 1 Score: 114 bits (286), Expect = 2.680e-28 Identity = 62/113 (54.87%), Postives = 80/113 (70.80%), Query Frame = 1
Query: 1 LPSYSISLFSIQSHVVRGYVGNKCSVFPLQLLGFDVDPVNSVQFSNHTGASLVVTMVVNVGSD-HTAGRETLMWSLAAHPWFEGTVLQGEELSRLLQGLESNNLLRGYTHVLT 336
LPS + + SIQSH V+GYVGNK ++FPLQLLGFDVDP+NSVQFSNHTG L +T V + + + R+ W A +P F G VL G++L L++GLE+N LL YTH+LT
Sbjct: 40 LPSGTGRVLSIQSHTVQGYVGNKSAIFPLQLLGFDVDPINSVQFSNHTGKQLYITSVSQLRAPIYICMRK---WDGAGYPTFRGQVLDGQQLWDLIEGLEANGLLF-YTHLLT 148
BLAST of mRNA_Ecto-sp13_S_contig13689.2904.1 vs. uniprot
Match: A0A7J9EAW0_9ROSI (Pyridoxal kinase n=1 Tax=Gossypium trilobum TaxID=34281 RepID=A0A7J9EAW0_9ROSI) HSP 1 Score: 111 bits (278), Expect = 4.320e-28 Identity = 60/115 (52.17%), Postives = 78/115 (67.83%), Query Frame = 1
Query: 1 LPSYSISLFSIQSHVVRGYVGNKCSVFPLQLLGFDVDPVNSVQFSNHTGASLVVTMVVNVGSDHTAGRETLMWSLAAHPWFEGTVLQGEELSRLLQGLESNNLLRGYTHVLTVSE 345
LPS + + SIQSH V+GYVGNK +VFPLQLLG+DVDP+NSVQFSNHTG L++ L+ +P F+G VL G++L L++GLE+NNLL YTH+LTV +
Sbjct: 11 LPSNTGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPINSVQFSNHTGKLLIL----------------LLGKYQRYPTFKGQVLNGQQLLDLVEGLEANNLLY-YTHLLTVCD 108
BLAST of mRNA_Ecto-sp13_S_contig13689.2904.1 vs. uniprot
Match: UPI00155A81D3 (pyridoxal kinase-like isoform X1 n=4 Tax=Vitis riparia TaxID=96939 RepID=UPI00155A81D3) HSP 1 Score: 112 bits (280), Expect = 6.140e-28 Identity = 63/118 (53.39%), Postives = 79/118 (66.95%), Query Frame = 1
Query: 1 LPSYSISLFSIQSHVVRGYVGNKCSVFPLQLLGFDVDPVNSVQFSNHTGASLVVTMVVNVGSDHTAGRETL------MWSLAAHPWFEGTVLQGEELSRLLQGLESNNLLRGYTHVLT 336
LPS + + SIQSH V+GYVGNK +VFPLQLLG+DVDP+NSVQFSNHTG L++ H+ TL + LA +P F+G VL G++L L+ GLE NNLL YTH+LT
Sbjct: 11 LPSETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPINSVQFSNHTGKLLIL---------HSNSLRTLKPEICQLEYLAGYPTFKGQVLNGQQLGDLIAGLEENNLLY-YTHLLT 118
BLAST of mRNA_Ecto-sp13_S_contig13689.2904.1 vs. uniprot
Match: A0A6A3BUQ2_HIBSY (Pyridoxal kinase n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3BUQ2_HIBSY) HSP 1 Score: 108 bits (269), Expect = 1.830e-27 Identity = 59/112 (52.68%), Postives = 73/112 (65.18%), Query Frame = 1
Query: 1 LPSYSISLFSIQSHVVRGYVGNKCSVFPLQLLGFDVDPVNSVQFSNHTGASLVVTMVVNVGSDHTAGRETLMWSLAAHPWFEGTVLQGEELSRLLQGLESNNLLRGYTHVLT 336
LPS + + SIQSH V+GYVGNK +VFPLQLLG+DVDP+NSVQFSNHTG ++ L +P F+G VL G EL L++GLE+NNLL YTH+LT
Sbjct: 11 LPSNTGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPINSVQFSNHTGKPFILL-------------------LKRYPTFKGQVLNGRELLDLIEGLEANNLLY-YTHLLT 102
BLAST of mRNA_Ecto-sp13_S_contig13689.2904.1 vs. uniprot
Match: A0A023EB17_SILLA (Pyridoxal kinase (Fragment) n=1 Tax=Silene latifolia TaxID=37657 RepID=A0A023EB17_SILLA) HSP 1 Score: 104 bits (259), Expect = 3.740e-26 Identity = 60/112 (53.57%), Postives = 71/112 (63.39%), Query Frame = 1
Query: 1 LPSYSISLFSIQSHVVRGYVGNKCSVFPLQLLGFDVDPVNSVQFSNHTGASLVVTMVVNVGSDHTAGRETLMWSLAAHPWFEGTVLQGEELSRLLQGLESNNLLRGYTHVLT 336
LPS + + SIQSH V+GYVGNK +VFPLQLLGFDVDPVNSVQFSNHTG +P F+G VL G+EL L++GLE+NNLL YTH+LT
Sbjct: 36 LPSDTGRVLSIQSHTVQGYVGNKSAVFPLQLLGFDVDPVNSVQFSNHTG----------------------------YPTFKGQVLNGKELWDLIEGLEANNLLF-YTHLLT 118
BLAST of mRNA_Ecto-sp13_S_contig13689.2904.1 vs. uniprot
Match: A0A2P6RSV5_ROSCH (Pyridoxal kinase n=2 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6RSV5_ROSCH) HSP 1 Score: 108 bits (270), Expect = 3.830e-26 Identity = 60/112 (53.57%), Postives = 75/112 (66.96%), Query Frame = 1
Query: 1 LPSYSISLFSIQSHVVRGYVGNKCSVFPLQLLGFDVDPVNSVQFSNHTGASLVVTMVVNVGSDHTAGRETLMWSLAAHPWFEGTVLQGEELSRLLQGLESNNLLRGYTHVLT 336
LPS + + SIQSH V+GYVGNK +VFPLQLLG+DVDP+NSVQFSNHTG + L++ +P F+G VL GE+L L+QGLESN+LL YTH+LT
Sbjct: 11 LPSETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPINSVQFSNHTG-------------------KLLLFHSNRYPTFKGQVLNGEQLWALIQGLESNDLLY-YTHLLT 102
BLAST of mRNA_Ecto-sp13_S_contig13689.2904.1 vs. uniprot
Match: A0A7J7L8G2_9MAGN (Pyridoxal kinase n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7L8G2_9MAGN) HSP 1 Score: 109 bits (272), Expect = 5.940e-26 Identity = 58/112 (51.79%), Postives = 79/112 (70.54%), Query Frame = 1
Query: 1 LPSYSISLFSIQSHVVRGYVGNKCSVFPLQLLGFDVDPVNSVQFSNHTGASLVVTMVVNVGSDHTAGRETLMWSLAAHPWFEGTVLQGEELSRLLQGLESNNLLRGYTHVLT 336
LPS + + SIQSH V+GYVGNK +VFPLQLLGFDVDP+NSVQFSNHTG + V + + +T + + +P ++G VL G++L LL+GL++N+LL YTH+LT
Sbjct: 41 LPSETGRVLSIQSHTVQGYVGNKSAVFPLQLLGFDVDPINSVQFSNHTGKLVYVMFCLEIQRPNTRCK---FFYQIGYPTYKGQVLNGQQLWDLLEGLKANDLLY-YTHLLT 148
BLAST of mRNA_Ecto-sp13_S_contig13689.2904.1 vs. uniprot
Match: A0A200QVP5_9MAGN (Pyridoxal kinase n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200QVP5_9MAGN) HSP 1 Score: 108 bits (269), Expect = 8.800e-26 Identity = 59/112 (52.68%), Postives = 76/112 (67.86%), Query Frame = 1
Query: 1 LPSYSISLFSIQSHVVRGYVGNKCSVFPLQLLGFDVDPVNSVQFSNHTGASLVVTMVVNVGSDHTAGRETLMWSLAAHPWFEGTVLQGEELSRLLQGLESNNLLRGYTHVLT 336
LPS + + SIQSH V+GYVGNK +VFPLQLLGFDVDP+NSVQFSNHTG L+ T ++ +P F+G VL G++L L++GLE+N+LL YTH+LT
Sbjct: 35 LPSGTGRVLSIQSHTVQGYVGNKSAVFPLQLLGFDVDPINSVQFSNHTGKLLISTSFQDM-------------FCVGYPTFKGQVLNGQQLWDLIEGLEANDLLY-YTHLLT 132 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13689.2904.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13689.2904.1 >prot_Ecto-sp13_S_contig13689.2904.1 ID=prot_Ecto-sp13_S_contig13689.2904.1|Name=mRNA_Ecto-sp13_S_contig13689.2904.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=121bp LPSYSISLFSIQSHVVRGYVGNKCSVFPLQLLGFDVDPVNSVQFSNHTGAback to top mRNA from alignment at Ecto-sp13_S_contig13689:3632..4484+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13689.2904.1 ID=mRNA_Ecto-sp13_S_contig13689.2904.1|Name=mRNA_Ecto-sp13_S_contig13689.2904.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=853bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13689:3632..4484+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13689:3632..4484+ >mRNA_Ecto-sp13_S_contig13689.2904.1 ID=mRNA_Ecto-sp13_S_contig13689.2904.1|Name=mRNA_Ecto-sp13_S_contig13689.2904.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=363bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13689:3632..4484+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |