prot_Ecto-sp13_S_contig13681.2899.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13681.2899.1
Unique Nameprot_Ecto-sp13_S_contig13681.2899.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length145
Homology
BLAST of mRNA_Ecto-sp13_S_contig13681.2899.1 vs. uniprot
Match: D7FN17_ECTSI (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN17_ECTSI)

HSP 1 Score: 200 bits (509), Expect = 1.020e-62
Identity = 97/100 (97.00%), Postives = 100/100 (100.00%), Query Frame = 0
Query:    1 MLGVVRSPWLTTLMQVSSRIVLVWGFMWAVPSTQGQLGSMLCITSWACVEIPRYLFYTFGVLKSSPYPLFYLRYSLFAVLYPTGIAGEVMTMLAGLPDLK 100
            MLGVVRSPW+TTLMQVSSRI+LVWGFMWAVPSTQGQLGSMLCITSWACVEIPRYLFYTFGVLKSSP+PLFYLRYSLFAVLYPTGIAGEVMTMLAGLPDLK
Sbjct:   64 MLGVVRSPWVTTLMQVSSRIILVWGFMWAVPSTQGQLGSMLCITSWACVEIPRYLFYTFGVLKSSPFPLFYLRYSLFAVLYPTGIAGEVMTMLAGLPDLK 163          
BLAST of mRNA_Ecto-sp13_S_contig13681.2899.1 vs. uniprot
Match: A0A835ZGJ3_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGJ3_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.610e-32
Identity = 56/100 (56.00%), Postives = 77/100 (77.00%), Query Frame = 0
Query:    1 MLGVVRSPWLTTLMQVSSRIVLVWGFMWAVPSTQGQLGSMLCITSWACVEIPRYLFYTFGVLKSSPYPLFYLRYSLFAVLYPTGIAGEVMTMLAGLPDLK 100
            ++G+V SPW+TTL+QVSSR+V+ WGF+++  ++Q      L   SWA VE+PRYLFY F ++ + PYPLF+LRYSLFAVLYP+GI GE+MT++ G   LK
Sbjct:   62 LVGLVPSPWMTTLLQVSSRLVVAWGFLYSCEASQDHYAMALTTVSWALVEVPRYLFYVFNIMGNVPYPLFWLRYSLFAVLYPSGITGEIMTIVNGFDCLK 161          
BLAST of mRNA_Ecto-sp13_S_contig13681.2899.1 vs. uniprot
Match: A0A482RN91_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RN91_9ARCH)

HSP 1 Score: 111 bits (277), Expect = 5.410e-28
Identity = 54/97 (55.67%), Postives = 67/97 (69.07%), Query Frame = 0
Query:    3 GVVRSPWLTTLMQVSSRIVLVWGFMWAVPSTQGQLGSMLCITSWACVEIPRYLFYTFGVLKSSPYPLFYLRYSLFAVLYPTGIAGEVMTMLAGLPDL 99
            G+VRSPW+T LMQV SR+  +W  M   P+ Q  L  +L  TSWA VE+PRYLFY   +  + PYPLF+LRYSLFA+LYPTGI GE+  M   L +L
Sbjct:   38 GIVRSPWVTVLMQVFSRVWTLWAVMDMAPTAQHSLFFLLACTSWALVEVPRYLFYALSIANAVPYPLFWLRYSLFAILYPTGITGELGCMYLSLFEL 134          
BLAST of mRNA_Ecto-sp13_S_contig13681.2899.1 vs. uniprot
Match: A0A7S3HHK7_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HHK7_9STRA)

HSP 1 Score: 105 bits (261), Expect = 3.090e-25
Identity = 51/92 (55.43%), Postives = 64/92 (69.57%), Query Frame = 0
Query:    1 MLGVVRSPWLTTLMQVSSRIVLVWGFMWAVPSTQGQLGSMLCITSWACVEIPRYLFYTFGVLKSSPYPLFYLRYSLFAVLYPTGIAGEVMTM 92
            M+G+V+SPW T  MQV SR+  +W  M    + Q  +  +L  TSW  VE+PRYLFY   +L + PYPLF+LRYSLFAVLYPTGI GE+ TM
Sbjct:   63 MVGLVKSPWATAFMQVFSRVWTLWAIMDTTDAAQTTVFFVLACTSWGLVEVPRYLFYALNLLNAVPYPLFWLRYSLFAVLYPTGITGELGTM 154          
BLAST of mRNA_Ecto-sp13_S_contig13681.2899.1 vs. uniprot
Match: A0A6G0XHX3_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHX3_9STRA)

HSP 1 Score: 103 bits (258), Expect = 8.260e-25
Identity = 53/114 (46.49%), Postives = 73/114 (64.04%), Query Frame = 0
Query:    1 MLGVVRSPWLTTLMQVSSRIVLVWGFMWAVPSTQGQLGSMLCITSWACVEIPRYLFYTFGVLKSSPYPLFYLRYSLFAVLYPTGIAGEVMTMLAGLPDLKVGVSAFHCMQSRSV 114
            M+G+VRSP  +T++QVSSR+ L+W     VP T+   G ++ +TSW+ VE+PRY FY   +  + P  LF+LRY LF VLYPTGI+GEV  ML+ LP +  G  A       +V
Sbjct:   65 MVGIVRSPVFSTVLQVSSRLALLWMINDLVPETRAHWGFVMMVTSWSLVEVPRYAFYALNLWNAVPDWLFFLRYHLFMVLYPTGISGEVSCMLSALPYVTNGAYAIQMPNDHNV 178          
BLAST of mRNA_Ecto-sp13_S_contig13681.2899.1 vs. uniprot
Match: A0A7S1G795_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G795_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.060e-24
Identity = 53/97 (54.64%), Postives = 68/97 (70.10%), Query Frame = 0
Query:    2 LGVVRSPWLTTLMQVSSRIVLVWGFMWAVPSTQGQLGSMLCITSWACVEIPRYLFYTFG-VLKSSPYPLFYLRYSLFAVLYPTGIAGEVMTMLAGLP 97
            L +V+SP  T  MQVSSR++LVWG+   + + Q      L + SWACVE+PRYLFY    V+   P PLF+LRY+LF VLYP+GI+GEV+ M AGLP
Sbjct:    7 LRLVKSPAATAAMQVSSRLLLVWGYTARLTACQQHWSLYLMVGSWACVEVPRYLFYAANLVVDKVPGPLFFLRYNLFLVLYPSGISGEVLQMWAGLP 103          
BLAST of mRNA_Ecto-sp13_S_contig13681.2899.1 vs. uniprot
Match: A0A147B7T9_9ACAR (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (Fragment) n=1 Tax=Carios mimon TaxID=360319 RepID=A0A147B7T9_9ACAR)

HSP 1 Score: 101 bits (251), Expect = 2.000e-24
Identity = 45/100 (45.00%), Postives = 68/100 (68.00%), Query Frame = 0
Query:    1 MLGVVRSPWLTTLMQVSSRIVLVWGFMWAVPSTQGQLGSMLCITSWACVEIPRYLFYTFGVLKSSPYPLFYLRYSLFAVLYPTGIAGEVMTMLAGLPDLK 100
            ++G+V S W  TL+Q+ SR+++VWG +  VP +QGQ G ++ + +W   EI RY FY   +  + PY L + RYS F VLYPTG++GE++TM+  LP +K
Sbjct:   21 LIGIVASNWFLTLIQILSRLMVVWGILVPVPESQGQYGIVMLLVAWCIAEITRYSFYGLTLYNACPYGLTWCRYSFFLVLYPTGVSGEIITMVTALPYIK 120          
BLAST of mRNA_Ecto-sp13_S_contig13681.2899.1 vs. uniprot
Match: A0A1Z5KVW7_ORNMO (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (Fragment) n=2 Tax=Ornithodoros TaxID=6937 RepID=A0A1Z5KVW7_ORNMO)

HSP 1 Score: 102 bits (253), Expect = 4.800e-24
Identity = 46/100 (46.00%), Postives = 68/100 (68.00%), Query Frame = 0
Query:    1 MLGVVRSPWLTTLMQVSSRIVLVWGFMWAVPSTQGQLGSMLCITSWACVEIPRYLFYTFGVLKSSPYPLFYLRYSLFAVLYPTGIAGEVMTMLAGLPDLK 100
            ++G+V S W  TL+Q+ SR+++VWG +  VP +Q Q G ++ + +W   EI RY FY   +  S PY L + RYS F VLYPTG++GE++TM+A LP +K
Sbjct:   69 LVGLVASNWFLTLIQILSRLMVVWGILVPVPESQNQYGIVMLLVAWCIAEITRYSFYALSLYHSCPYALTWCRYSFFLVLYPTGVSGEIITMVAALPYIK 168          
BLAST of mRNA_Ecto-sp13_S_contig13681.2899.1 vs. uniprot
Match: A0A8K1FNL1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FNL1_PYTOL)

HSP 1 Score: 102 bits (253), Expect = 4.910e-24
Identity = 57/134 (42.54%), Postives = 80/134 (59.70%), Query Frame = 0
Query:    2 LGVVRSPWLTTLMQVSSRIVLVWGFMWAVPSTQGQLGSMLCITSWACVEIPRYLFYTFGVLKSSPYPLFYLRYSLFAVLYPTGIAGEVMTMLAGLPDLKVGVSAFHCMQSRSVVLPCFM--------FLPGLGV 127
            LG VRSP  +TL+QVSSR+ LVW      P ++ Q+G  L + SW  VE+PRY FY   +    P  LF+LRY LF VLYP+G+AGEV+ +++ LP L+ GV A     + +V +  +         ++PGL V
Sbjct:   73 LGFVRSPLGSTLIQVSSRLWLVWAINELCPISRYQIGFPLMVLSWGLVEVPRYSFYALNLYNLVPSFLFFLRYHLFMVLYPSGVAGEVLCLISALPYLQTGVYAIQMPNAHNVAISLYTVVLMSIVTYIPGLPV 206          
BLAST of mRNA_Ecto-sp13_S_contig13681.2899.1 vs. uniprot
Match: A0A484EB31_BRELC (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EB31_BRELC)

HSP 1 Score: 102 bits (253), Expect = 5.130e-24
Identity = 55/133 (41.35%), Postives = 78/133 (58.65%), Query Frame = 0
Query:    3 GVVRSPWLTTLMQVSSRIVLVWGFMWAVPSTQGQLGSMLCITSWACVEIPRYLFYTFGVLKSSPYPLFYLRYSLFAVLYPTGIAGEVMTMLAGLPDLKVGVSAFHCMQSRSVVLPCFM--------FLPGLGV 127
            G VRSP ++T+MQVSSR+ LVWG     P ++ Q G  L + SW  VE+PRY FY   +  + P  LFYLRY LF VLYP+G+ GEV+ M++ L  L  G  +     + +V +  F+        ++PGL +
Sbjct:   78 GFVRSPVISTIMQVSSRLWLVWGINVLCPVSRYQFGFPLMVASWGLVEVPRYAFYALNLYNAVPAALFYLRYHLFMVLYPSGVLGEVLCMVSSLNYLSKGAYSIQLPNTHNVSISLFVVVILVLLVYIPGLPI 210          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13681.2899.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN17_ECTSI1.020e-6297.00Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A835ZGJ3_9STRA1.610e-3256.00Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A482RN91_9ARCH5.410e-2855.67Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S3HHK7_9STRA3.090e-2555.43Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A6G0XHX3_9STRA8.260e-2546.49Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A7S1G795_9STRA1.060e-2454.64Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A147B7T9_9ACAR2.000e-2445.00Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A1Z5KVW7_ORNMO4.800e-2446.00Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A8K1FNL1_PYTOL4.910e-2442.54Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A484EB31_BRELC5.130e-2441.35Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007482Protein-tyrosine phosphatase-like, PTPLAPFAMPF04387PTPLAcoord: 1..134
e-value: 4.4E-32
score: 111.1
IPR007482Protein-tyrosine phosphatase-like, PTPLAPANTHERPTHR11035PTPLA DOMAIN PROTEINcoord: 1..104
NoneNo IPR availablePANTHERPTHR11035:SF3VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASEcoord: 1..104
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 60..70
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..135
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 94..113
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..59
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 136..145
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..93
NoneNo IPR availableTMHMMTMhelixcoord: 70..92
NoneNo IPR availableTMHMMTMhelixcoord: 35..57
NoneNo IPR availableTMHMMTMhelixcoord: 119..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13681contigEcto-sp13_S_contig13681:1026..2029 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13681.2899.1mRNA_Ecto-sp13_S_contig13681.2899.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13681 1002..2029 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13681.2899.1 ID=prot_Ecto-sp13_S_contig13681.2899.1|Name=mRNA_Ecto-sp13_S_contig13681.2899.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=145bp
MLGVVRSPWLTTLMQVSSRIVLVWGFMWAVPSTQGQLGSMLCITSWACVE
IPRYLFYTFGVLKSSPYPLFYLRYSLFAVLYPTGIAGEVMTMLAGLPDLK
VGVSAFHCMQSRSVVLPCFMFLPGLGVVVVTVVVVTEVVALPVVF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007482Tyr_Pase-like_PTPLA