mRNA_Ecto-sp13_S_contig13678.2898.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13678.2898.1
Unique NamemRNA_Ecto-sp13_S_contig13678.2898.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13678.2898.1 vs. uniprot
Match: D7G0A3_ECTSI (Glutathione gamma-glutamylcysteinyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A3_ECTSI)

HSP 1 Score: 653 bits (1684), Expect = 2.120e-232
Identity = 350/419 (83.53%), Postives = 360/419 (85.92%), Query Frame = 1 
Query:   22 TQQHTLEDLRAVVEECSSADRGRVVVVTYDRRGLKQTGSGHFSPVGGYHKEKDLVLIMDTARFKLPPHWAPLPILWEAMQRVDPDTGRPRGYMVLEKAHSLSHRLFYSNARNYKDWPKVASWVNEMIELACGEPEEENGDLSGLAGGDNDDASKCPAGAAVAAPAADVRESRRALREATTVAEFVPALMALLPREVKGLLTTFDTPEHGSSSLDVEDLLSTTTPAPPFNATDYASGKAQDALVLQAIQGTDIYREVTNVERYSRSSDKL--QQNENQAAAXXXXXXXXXX-PTLXXXXXXXXXXXXXAVLSPASGALSSAYSFCPKRSGCGCSWRHEVSIVAYALLLLLHKRDDHGEVCGGGG--VSGAGAGGDSRPPPLWRKDPLHGLPATVAIQAKHVAGMLVGLVELEECEKCKAR 1263
            T  HTLEDLRAV+EECSSAD GRVVVV+YDRRGLKQTGSGHFSP+GGYHKEKDLVLIMDTARFKLPPHWAPLPILWEAMQRVDPDTGRPRGYMVLEKAHSLSHRLFY+NARNYKDWPKVASWVNEMIELACGEP+EEN DLSGLAGGD                 ADV ESRRALR ATTVAEFVPALM LLP EVKGLLTTFD PEH S+SL+VEDLLSTTTPAPPFNAT+YASGKAQD LVLQAIQGTDIYREVTNVER  RSSDKL  QQ+ENQ   XXXXXXX    PTL             AVLSPASGALSSAYSFCPK+SGCGCSWRHEVSIVAYALLLLLHKRDDHGEVCG     VSGAGAGGD RPPPLWRKDPLH LPATVAIQAKHVAGMLVGLVELEECEKCKAR
Sbjct:   87 TDTHTLEDLRAVIEECSSADAGRVVVVSYDRRGLKQTGSGHFSPIGGYHKEKDLVLIMDTARFKLPPHWAPLPILWEAMQRVDPDTGRPRGYMVLEKAHSLSHRLFYANARNYKDWPKVASWVNEMIELACGEPKEENDDLSGLAGGDXXXXXXXXX---XXXXXADVHESRRALRHATTVAEFVPALMTLLPPEVKGLLTTFDAPEHASTSLEVEDLLSTTTPAPPFNATEYASGKAQDVLVLQAIQGTDIYREVTNVERNPRSSDKLKLQQDENQXXXXXXXXXXPCCAPTLPLPAAAPLPPSPPAVLSPASGALSSAYSFCPKKSGCGCSWRHEVSIVAYALLLLLHKRDDHGEVCGXXXXXVSGAGAGGDIRPPPLWRKDPLHQLPATVAIQAKHVAGMLVGLVELEECEKCKAR 502
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BLAST of mRNA_Ecto-sp13_S_contig13678.2898.1 vs. uniprot
Match: A0A6H5KY15_9PHAE (Glutathione gamma-glutamylcysteinyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY15_9PHAE)

HSP 1 Score: 589 bits (1519), Expect = 1.130e-205
Identity = 331/418 (79.19%), Postives = 346/418 (82.78%), Query Frame = 1 
Query:   22 TQQHTLEDLRAVVEECSSADRGRVVVVTYDRRGLKQTGSGHFSPVGGYHKEKDLVLIMDTARFKLPPHWAPLPILWEAMQRVDPDTGRPRGYMVLEKAHSLSHRLFYSNARNYKDWPKVASWVNEMIELACGEPEEENGDLSGLAGGDNDDASKCPAGAAVAAP--AADVRESRRALREATTVAEFVPALMALLPREVKGLLTTFDTPEHGSSSLDVEDLLSTTTPAPPFNATDYASGKAQDALVLQAIQGTDIYREVTNVERYSRSSDKL--QQNENQAAAXXXXXXXXXXPTLXXXXXXXXXXXXXAVLSPASGALSSAYSFCPKRSGCGCSWRHEVSIVAYALLLLLHKRDDHGEVCGGGGVSGAGAGGDSRPPPLWRKDPLHGLPATVAIQAKHVAGMLVGLVELEECEKCKAR 1263
            T  HTLEDLRAV+EECSSAD+GRVVVV+YDRRGLKQTGSGHFSPVGGYHKEKDLVLIMDTARFKLPPHWAPLPILWEAMQRVDPDTGRPRGYMVLEKAHSLSHRLFY+NARNYKDWPKVASWVNEMIELACGEPE+EN DLSGLA GD+D+ASK PA A       AADVRESRRALREATTVAEFVPALMALLPREVKGLLTTFD PEH SSS +VE+LL+ TTPAPPFNAT+YASGKAQD LVLQAIQGTDIYREVTNVER+SRSSDKL  Q++ENQAAA        XX   XXXXXXXXXXXXX    PASGALSSAYSFCPK+SGCGCSWRHEVSIVAYALLLLLHKRDDHGE                                     AKHVAGMLVGLVELEECEKCKAR
Sbjct:  232 TDTHTLEDLRAVIEECSSADKGRVVVVSYDRRGLKQTGSGHFSPVGGYHKEKDLVLIMDTARFKLPPHWAPLPILWEAMQRVDPDTGRPRGYMVLEKAHSLSHRLFYANARNYKDWPKVASWVNEMIELACGEPEQENDDLSGLADGDDDNASKFPAAAXXXXXXXAADVRESRRALREATTVAEFVPALMALLPREVKGLLTTFDAPEHASSSPEVENLLTATTPAPPFNATEYASGKAQDGLVLQAIQGTDIYREVTNVERFSRSSDKLKLQKDENQAAATAPSSPCCXX-XXXXXXXXXXXXXXXXXXXPASGALSSAYSFCPKKSGCGCSWRHEVSIVAYALLLLLHKRDDHGE-------------------------------------AKHVAGMLVGLVELEECEKCKAR 611
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BLAST of mRNA_Ecto-sp13_S_contig13678.2898.1 vs. uniprot
Match: A0A350Y345_9CYAN (Glutathione gamma-glutamylcysteinyltransferase n=1 Tax=Cyanobacteria bacterium UBA11370 TaxID=2055769 RepID=A0A350Y345_9CYAN)

HSP 1 Score: 137 bits (346), Expect = 6.560e-33
Identity = 63/128 (49.22%), Postives = 89/128 (69.53%), Query Frame = 1 
Query:   28 QHTLEDLRAVVEECSSADRGRVVVVTYDRRGLKQTGSGHFSPVGGYHKEKDLVLIMDTARFKLPPHWAPLPILWEAMQRVDPDTGRPRGYMVLEKAHSLSHRLFYSNARNYKDWPKVASWVNEMIELA 411
            Q +LE+ R  + + +S+ +G  +VV+Y R+ L QTG+GHFSPVGGYH E+DL+LI+D ARFK PPHW PLP+LWEA+  +D  TG+ RGY++L K  SL+H  +Y     Y+ W  VA +  E++  A
Sbjct:  124 QSSLENFRHAIRKATSSPQGLHMVVSYSRQVLGQTGNGHFSPVGGYHPERDLILILDVARFKYPPHWVPLPLLWEALAPIDTVTGKSRGYILLSKRDSLNHSFYYVAVDRYQ-WAIVAPYFTEILPTA 250
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BLAST of mRNA_Ecto-sp13_S_contig13678.2898.1 vs. uniprot
Match: K9VU88_9CYAN (Glutathione gamma-glutamylcysteinyltransferase n=1 Tax=Crinalium epipsammum PCC 9333 TaxID=1173022 RepID=K9VU88_9CYAN)

HSP 1 Score: 132 bits (333), Expect = 4.260e-31
Identity = 62/125 (49.60%), Postives = 86/125 (68.80%), Query Frame = 1 
Query:   28 QHTLEDLRAVVEECSSADRGRVVVVTYDRRGLKQTGSGHFSPVGGYHKEKDLVLIMDTARFKLPPHWAPLPILWEAMQRVDPDTGRPRGYMVLEKAHSLSHRLFYSNARNYKDWPKVASWVNEMI 402
            Q +LE  R  ++E +S+ +   ++V+Y R+ L QTG GHFSPVGGYH E+DLVLI+D ARFK PPHW PLP+LW+A+Q +D  TG+ RGYM+L KA + +H  FY  A +   W  VA +  + +
Sbjct:  124 QSSLEQFRQTIKEATSSPQDLHIIVSYSRQILGQTGDGHFSPVGGYHAERDLVLILDVARFKYPPHWVPLPLLWDALQPIDLVTGKGRGYMLLSKADTGNH-TFYHVALDQYQWATVAPYFTKTL 247
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BLAST of mRNA_Ecto-sp13_S_contig13678.2898.1 vs. uniprot
Match: A7M779_FAGES (Glutathione gamma-glutamylcysteinyltransferase n=1 Tax=Fagopyrum esculentum TaxID=3617 RepID=A7M779_FAGES)

HSP 1 Score: 133 bits (335), Expect = 8.330e-31
Identity = 63/128 (49.22%), Postives = 86/128 (67.19%), Query Frame = 1 
Query:   19 HTQQHTLEDLRAVVEECSSADRGRVVVVTYDRRGLKQTGSGHFSPVGGYHKEKDLVLIMDTARFKLPPHWAPLPILWEAMQRVDPDTGRPRGYMVLEKAHSLSHRLFYSNARNYKDWPKVASWVNEMI 402
            HT + TLED R+ V  C+S++  R ++V+Y R   KQTGSGHFSP+GGYH  +DLVL++D ARFK PPHW PL +LWEAM  VD +TGR RG+M+L +       L+  N R +K W   A ++ + +
Sbjct:  123 HTNESTLEDFRSYVISCTSSE-DRHLIVSYHRGHFKQTGSGHFSPIGGYHAGRDLVLVLDVARFKYPPHWVPLTLLWEAMDTVDEETGRRRGFMILARPQRAPSILYTVNCR-HKSWEGTAKYLTKDL 248
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BLAST of mRNA_Ecto-sp13_S_contig13678.2898.1 vs. uniprot
Match: A0A7Z9BJ61_9CYAN (Glutathione gamma-glutamylcysteinyltransferase n=1 Tax=Planktothrix paucivesiculata PCC 9631 TaxID=671071 RepID=A0A7Z9BJ61_9CYAN)

HSP 1 Score: 130 bits (326), Expect = 3.010e-30
Identity = 60/126 (47.62%), Postives = 86/126 (68.25%), Query Frame = 1 
Query:   34 TLEDLRAVVEECSSADRGRVVVVTYDRRGLKQTGSGHFSPVGGYHKEKDLVLIMDTARFKLPPHWAPLPILWEAMQRVDPDTGRPRGYMVLEKAHSLSHRLFYSNARNYKDWPKVASWVNEMIELA 411
            TL++ R  V++ S+  +G  +V  Y+R+ L QTG GHFSP+GGYH ++DLVLIMD ARFK PPHW PLP+LW+A + +D  TG+ RGY+ L K+  L    FY  A + ++W +VA +  ++I  A
Sbjct:  126 TLDEFRETVQQTSATPQGFHLVAAYNRQILGQTGEGHFSPLGGYHPQRDLVLIMDVARFKYPPHWVPLPLLWQAFEPLDATTGQCRGYISLRKSTHLRETFFYI-ALDLQEWKRVAPYFTDIIPTA 250
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BLAST of mRNA_Ecto-sp13_S_contig13678.2898.1 vs. uniprot
Match: A0A061DNJ0_THECC (Glutathione gamma-glutamylcysteinyltransferase n=6 Tax=Byttnerioideae TaxID=214909 RepID=A0A061DNJ0_THECC)

HSP 1 Score: 132 bits (331), Expect = 3.090e-30
Identity = 65/129 (50.39%), Postives = 86/129 (66.67%), Query Frame = 1 
Query:   22 TQQHTLEDLRAVVEECSSADRGRVVVVTYDRRGLKQTGSGHFSPVGGYHKEKDLVLIMDTARFKLPPHWAPLPILWEAMQRVDPDTGRPRGYMVLEKAHSLSHRLFYSNARNYKDWPKVASWVNEMIEL 408
            T Q +L+D R  V  C+S++   ++V +Y R   KQTGSGHFSP+GGYH  KD+VLI+D ARFK PPHW PL +LWEAM  VD  TG  RG+MV+ K H  +  L+  + R +KDW  VA ++ E + L
Sbjct:  123 TNQSSLDDFRQRVISCTSSEDCHLIV-SYHRGVFKQTGSGHFSPIGGYHAGKDMVLILDVARFKYPPHWVPLSLLWEAMNTVDEATGHRRGFMVISKLHKAASVLYTVSCR-HKDWNFVAKYLTEDVPL 249
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BLAST of mRNA_Ecto-sp13_S_contig13678.2898.1 vs. uniprot
Match: A0A2R6PEC4_ACTCC (Glutathione gamma-glutamylcysteinyltransferase n=2 Tax=Actinidia TaxID=3624 RepID=A0A2R6PEC4_ACTCC)

HSP 1 Score: 130 bits (328), Expect = 8.400e-30
Identity = 60/127 (47.24%), Postives = 84/127 (66.14%), Query Frame = 1 
Query:   22 TQQHTLEDLRAVVEECSSADRGRVVVVTYDRRGLKQTGSGHFSPVGGYHKEKDLVLIMDTARFKLPPHWAPLPILWEAMQRVDPDTGRPRGYMVLEKAHSLSHRLFYSNARNYKDWPKVASWVNEMI 402
            T Q T++D R  V  CSS+D   V+  +Y RR  KQTG+GHFSP+GGYH  KD+ L++D ARFK PPHW PL +LWEAM  VD D+G+PRG+M++ K H     L Y+ +  ++ W   A ++ + +
Sbjct:  123 TNQSTIDDFRKYVMACSSSDDCHVIS-SYHRRSFKQTGAGHFSPIGGYHAGKDMALVLDVARFKYPPHWVPLKLLWEAMDTVDGDSGQPRGFMLISKLHRAP-ALLYTLSCKHESWISTAKYLVDDV 247
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BLAST of mRNA_Ecto-sp13_S_contig13678.2898.1 vs. uniprot
Match: A0A6P6GFI5_ZIZJJ (Glutathione gamma-glutamylcysteinyltransferase n=1 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P6GFI5_ZIZJJ)

HSP 1 Score: 126 bits (316), Expect = 1.160e-29
Identity = 61/129 (47.29%), Postives = 82/129 (63.57%), Query Frame = 1 
Query:   22 TQQHTLEDLRAVVEECSSADRGRVVVVTYDRRGLKQTGSGHFSPVGGYHKEKDLVLIMDTARFKLPPHWAPLPILWEAMQRVDPDTGRPRGYMVLEKAHSLSHRLFYSNARNYKDWPKVASWVNEMIEL 408
            T + T++D R  V  C+S D   +V  +Y R   KQTG+GHFSP+GGYH  +D+VLI+D ARFK PPHW PL +LW+AM  +D  TG  RGYM++ K H     L+  N R +K W  VA ++ E + L
Sbjct:  132 TSESTVDDFRNSVISCASTDDCHLVA-SYHRAVFKQTGTGHFSPIGGYHAGRDMVLILDVARFKYPPHWVPLTLLWDAMDIIDEATGHRRGYMIISKLHRAPSILYTVNCR-HKGWNSVAKYLVEDVPL 258
[Close]
BLAST of mRNA_Ecto-sp13_S_contig13678.2898.1 vs. uniprot
Match: A5X6J3_LATSA (Glutathione gamma-glutamylcysteinyltransferase (Fragment) n=1 Tax=Lathyrus sativus TaxID=3860 RepID=A5X6J3_LATSA)

HSP 1 Score: 124 bits (312), Expect = 2.250e-29
Identity = 56/128 (43.75%), Postives = 83/128 (64.84%), Query Frame = 1 
Query:   19 HTQQHTLEDLRAVVEECSSADRGRVVVVTYDRRGLKQTGSGHFSPVGGYHKEKDLVLIMDTARFKLPPHWAPLPILWEAMQRVDPDTGRPRGYMVLEKAHSLSHRLFYSNARNYKDWPKVASWVNEMI 402
            H  Q T+ D R  V +CSS+D   ++  +Y R  LKQTG+GHFSP+GGYH  KD+ LI+D ARFK PPHW PL +LWE M  +D  TG+ RG+M++ + H+    L Y+ +  ++ W  +A ++ + +
Sbjct:   45 HASQSTINDFRKYVHKCSSSDDCHLIS-SYHRGALKQTGTGHFSPIGGYHVGKDMALILDVARFKYPPHWVPLSVLWEGMNYIDESTGKSRGFMLISRPHTEPGML-YTLSCKHESWNSIAKFLMDDV 170
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13678.2898.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0A3_ECTSI2.120e-23283.53Glutathione gamma-glutamylcysteinyltransferase n=1... [more]
A0A6H5KY15_9PHAE1.130e-20579.19Glutathione gamma-glutamylcysteinyltransferase n=1... [more]
A0A350Y345_9CYAN6.560e-3349.22Glutathione gamma-glutamylcysteinyltransferase n=1... [more]
K9VU88_9CYAN4.260e-3149.60Glutathione gamma-glutamylcysteinyltransferase n=1... [more]
A7M779_FAGES8.330e-3149.22Glutathione gamma-glutamylcysteinyltransferase n=1... [more]
A0A7Z9BJ61_9CYAN3.010e-3047.62Glutathione gamma-glutamylcysteinyltransferase n=1... [more]
A0A061DNJ0_THECC3.090e-3050.39Glutathione gamma-glutamylcysteinyltransferase n=6... [more]
A0A2R6PEC4_ACTCC8.400e-3047.24Glutathione gamma-glutamylcysteinyltransferase n=2... [more]
A0A6P6GFI5_ZIZJJ1.160e-2947.29Glutathione gamma-glutamylcysteinyltransferase n=1... [more]
A5X6J3_LATSA2.250e-2943.75Glutathione gamma-glutamylcysteinyltransferase (Fr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13678contigEcto-sp13_S_contig13678:576..4171 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score662.5
Seed ortholog evalue1.3e-187
Seed eggNOG ortholog2880.D7G0A3
Preferred namePCS1
Model size1266
KEGG koko:K05941
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006518,GO:0006725,GO:0006790,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006950,GO:0006952,GO:0008150,GO:0008152,GO:0008324,GO:0008490,GO:0008509,GO:0009056,GO:0009058,GO:0009605,GO:0009607,GO:0009617,GO:0009636,GO:0009987,GO:0010035,GO:0010038,GO:0010273,GO:0015075,GO:0015103,GO:0015105,GO:0015291,GO:0015318,GO:0015399,GO:0015405,GO:0015446,GO:0015698,GO:0015700,GO:0016043,GO:0016143,GO:0016145,GO:0016462,GO:0016740,GO:0016746,GO:0016755,GO:0016756,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019439,GO:0019748,GO:0019757,GO:0019759,GO:0019760,GO:0019762,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0033036,GO:0033037,GO:0033554,GO:0034220,GO:0034641,GO:0042221,GO:0042343,GO:0042344,GO:0042430,GO:0042436,GO:0042545,GO:0042623,GO:0042625,GO:0042626,GO:0042742,GO:0043043,GO:0043167,GO:0043169,GO:0043207,GO:0043225,GO:0043436,GO:0043492,GO:0043603,GO:0043604,GO:0044237,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044273,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0045229,GO:0046483,GO:0046685,GO:0046686,GO:0046688,GO:0046689,GO:0046700,GO:0046870,GO:0046872,GO:0046914,GO:0046937,GO:0046938,GO:0050787,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051704,GO:0051707,GO:0051716,GO:0052386,GO:0052482,GO:0052542,GO:0052543,GO:0052544,GO:0052545,GO:0055085,GO:0061687,GO:0070727,GO:0071554,GO:0071555,GO:0071585,GO:0071704,GO:0071840,GO:0090662,GO:0097501,GO:0098542,GO:0098655,GO:0098656,GO:0098660,GO:0098754,GO:0099131,GO:0099132,GO:0099133,GO:0140096,GO:1901135,GO:1901136,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901658,GO:1901683,GO:1901684,GO:1990169,GO:1990170
Exons5
EggNOG free text desc.glutathione gamma-glutamylcysteinyltransferase activity
EggNOG OGsKOG0632@1,KOG0632@2759
EC2.3.2.15
Cds size1266
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462730.2194471-CDS-Ecto-sp13_S_contig13678:575..12381681462730.2194471-CDS-Ecto-sp13_S_contig13678:575..1238Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13678 576..1238 -
1681462730.2320266-CDS-Ecto-sp13_S_contig13678:1506..17341681462730.2320266-CDS-Ecto-sp13_S_contig13678:1506..1734Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13678 1507..1734 -
1681462730.2414887-CDS-Ecto-sp13_S_contig13678:2145..22651681462730.2414887-CDS-Ecto-sp13_S_contig13678:2145..2265Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13678 2146..2265 -
1681462730.2530494-CDS-Ecto-sp13_S_contig13678:2866..29511681462730.2530494-CDS-Ecto-sp13_S_contig13678:2866..2951Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13678 2867..2951 -
1681462730.2682433-CDS-Ecto-sp13_S_contig13678:4001..41711681462730.2682433-CDS-Ecto-sp13_S_contig13678:4001..4171Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13678 4002..4171 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13678.2898.1prot_Ecto-sp13_S_contig13678.2898.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13678 576..4171 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13678.2898.1

>prot_Ecto-sp13_S_contig13678.2898.1 ID=prot_Ecto-sp13_S_contig13678.2898.1|Name=mRNA_Ecto-sp13_S_contig13678.2898.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=422bp
MKNTHTHTQQHTLEDLRAVVEECSSADRGRVVVVTYDRRGLKQTGSGHFS
PVGGYHKEKDLVLIMDTARFKLPPHWAPLPILWEAMQRVDPDTGRPRGYM
VLEKAHSLSHRLFYSNARNYKDWPKVASWVNEMIELACGEPEEENGDLSG
LAGGDNDDASKCPAGAAVAAPAADVRESRRALREATTVAEFVPALMALLP
REVKGLLTTFDTPEHGSSSLDVEDLLSTTTPAPPFNATDYASGKAQDALV
LQAIQGTDIYREVTNVERYSRSSDKLQQNENQAAAAAAPSSPCCAPTLPS
PAAPPLPPSPPAVLSPASGALSSAYSFCPKRSGCGCSWRHEVSIVAYALL
LLLHKRDDHGEVCGGGGVSGAGAGGDSRPPPLWRKDPLHGLPATVAIQAK
HVAGMLVGLVELEECEKCKAR*
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mRNA from alignment at Ecto-sp13_S_contig13678:576..4171-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13678.2898.1 ID=mRNA_Ecto-sp13_S_contig13678.2898.1|Name=mRNA_Ecto-sp13_S_contig13678.2898.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3596bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13678:576..4171- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGAACACACACACGCACACACAACAGCACACCCTCGAAGATCTCCG
GGCGGTCGTCGAGGAGTGCAGCTCGGCGGATAGGGGGAGGGTGGTGGTGG
TGACGTACGACCGGCGGGGGTTGAAGCAGACAGGCTCGGGACACTTCAGT
CCCGTCGGTGGCTATCACAAGTGAGTTTTAGCAGCGCCGCCCCCCCATAT
CAAACGCCCAGCCCGCGCATGCGTGCGCTTTTGTACCGTGGGTTCGTGGT
GTTAAGTTTTCAGTACAGTAGTAGGCCCTCCATAACGTGGGTATGCGCCA
GACCGGTTCACCCCGCACTATCCAGGGCACCCGCGCTACTCCATGGAAAA
ATCGCCTTTAGTATTCCATCTGTTCCAGCCATTTTCACCGTCACTATCGC
TGGTACCCGCCTTATTATATCCCCGCCATACATATAGAGGCTCTACGACT
GTAGCGGCATGTAGTTGTAAAAGTGTGCCATGTTTTCTGCGAAGGGTTGA
TGTCCGGGAAGGCCGGGAAGTTTAGAATCGTATTTGTGGTGTTCATTTAG
CTAAGGAGGCGTCCGTGCGTACGAGTTTTACTGCGCCGCGTGCTTGTGGT
GTTCAGTGGGGGCGGAGAGGCCTCCTGCGTCGTGTACGCGAGTGAGTGTT
TTGTGTGCGACGCGTGGGGTGTACCGCGGCGAGGAGTTATTATCCGTACA
GGCCGCCCAGGACCAGATGTGGATCCATATTTCAGGCACCATCGTGCCGG
TCATGGCGCCGGCAGGAGCAGGTTCACGTGGAGTTTGTGTGGTAATAGTC
GTGGCAGGGCGATTCTGACGATTGAGGCTTTTGACGTCATTGTCTCCGGG
GAGAGGAAGTTGTCGGTTCATCGCTCGAATGGGTTGTGACTTACCTACTA
GTGTTAAAATTCTGGACATGTGACATGTTTGTTTGTGTTTTTCCGATCAC
AGTTTTTTGCAACAACTACTGGTGGTATCGTCGACGGCGGCGGTCGAACC
TCGGACATGTTTTTTTTTCATTTTCTGTCACAAGTCAGGCCCACCGCCCC
GAAGAAAGCTGTGTAGCTCATCATCCTCGTGTACCTGACGAGTTGTGTGG
CTTCTTGCTGTTGCATCGTGTGATCTGAAGCTTGGGTGGCGTTGCACGCA
GCGATTGTCTTTGATGCCAACTTTTTCTTGTGCTGCTGCTGCCGCCGCCT
TCTGTTGACTTGGTCCGCAGAGAGAAAGACCTCGTGCTCATCATGGACAC
CGCCCGCTTCAAGCTTCCCCCGCACTGGGCACCGCTGCCAATACTGTGGG
AGGCGGTACGGTTTTTGTAGGCTCGTCGTCGTAGTCGCTTTTCTAAAGTA
GACAACATCTCACAGCAAGACTATGCGTTCGAGATATAACCAAAAGACAG
TTGAAAGGGATGTGCTAAAGTCTTTTCAGTGAGTGGAGGGAAACCGGCTG
GAAACTGGGCTTAGTTTGAGTTTGTTTTGAGCCTATACGCTGAACTGTAT
CAGTGATGCTAACTGGTGCTGAAAACAAAAGCATCTGTATACTTGTAGTG
GATATGTGTTGTAACACATCCCCTGTAGTTCTCTACTGTTTCAACCACAA
AATTATCGGGGAGAAGCCCACCGTCATGTCGAGTGTTATAGAATGTGAAT
TTCACAGGGAGACAGCTCACTGGCTTACTTATTATTTGAATCTTCTTGCT
TATTATAATTGTTCCGTGTTCTCTTGCCTGACCATAACACCACCACTAAG
GAACGCACGTGCACGGTAGATGAGCGGAAGCCTGGTGAACCACAACTCGC
TTCAAGTGAGAAGGGCATCATCGGTGTTTGAGACCCTCTCCCCCCCCCCC
CCCCCCCCCCGCTCGTACTATGCAAACTCACACGGACTGCTGTGGCACAA
CAACAGATGCAGCGGGTGGATCCGGACACCGGGAGGCCGAGAGGCTACAT
GGTGCTCGAGAAGGCGCACAGCCTGTCGCACCGTCTCTTCTACTCCAACG
CGAGAAACTACAAGGACTGGCCCAAGGTACGTTCGCGGCAGCAGTCAGAG
CGTGGTTGGGGAGCGCGAGGCGGTAGTTTAGTGCAAGCAACAAATGTGAG
CACACACACACACACCGTCCTCCTCTCGCACGCAGTTTCTCGGGATGCAG
TCCATCCTTACCGCGATGAACGGATATGTACCCCGCAGATGATAAGTCTA
CCGCGCTTGCTTGGTGACAATACCCACCCGGTCGTTGAAGAACCACCTTC
GGTGGGATGTGAGAAGGTACATGAGCAGTTCCTACAGGAGAGGACGGCTT
CGAGTGCCGTAGCCGTCGAACCAGCTACTTCACGCTTCTCTTTTTGATCC
CTCCCCTCTACCTACGAGATGCTGTACTGCGACACGCAACACCATTGAGT
ACGCCCCCGCTCCCCCCCGCCCTCTCTCTCTCGAAAGGTTGCATCGTGGG
TGAACGAGATGATCGAGCTTGCCTGCGGTGAGCCGGAAGAGGAGAACGGT
GACCTGTCGGGCCTTGCCGGCGGCGACAACGACGATGCATCGAAATGCCC
CGCCGGCGCCGCCGTCGCCGCTCCCGCCGCCGACGTGCGCGAGTCTCGGA
GGGCCCTCCGAGAGGCGACGACCGTGGCGGAGTTCGTGCCGGCCCTGATG
GCCCTCCTGCCCCGGGTAAGTTGGGGAGATTTAGACCCTCTCGCGGTGTT
GGTATTAGAGCTGCCTCGGATTTGTGTCTCCGGTTCGTCTCTTGCCTTGC
CTTGCCTTTTCCCGGCGGGGCCCTTTTTTGGGGGGGGGGAAGGACCTCTT
CCTCTGTCTGTCTGTCTCGCTCTCTGTCATTCACCGTTTCGTCTCGCTCC
CGGCATGTCCCCCCCGCTGCTGTGTTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCCCTCTCTCTGTCCCGCCTTCAGGAGGTGAAGGGCCTCCT
CACGACCTTCGACACACCCGAACACGGGTCGTCGTCGCTGGACGTGGAGG
ACCTCCTCTCCACCACGACGCCGGCGCCGCCATTCAACGCCACCGACTAC
GCGTCCGGCAAGGCCCAAGACGCGCTTGTCCTGCAGGCGATACAGGGCAC
CGACATATACCGAGAAGTGACCAACGTCGAGCGGTACTCCCGCAGCAGCG
ACAAGCTCCAGCAGAATGAGAACCAGGCCGCGGCCGCCGCCGCGCCGTCC
TCTCCCTGTTGTGCCCCGACCCTCCCTTCGCCGGCGGCGCCACCGCTGCC
GCCGTCGCCTCCGGCTGTCCTCTCGCCGGCGTCCGGCGCGCTGTCGTCGG
CCTACTCGTTCTGCCCGAAGAGGTCAGGCTGCGGGTGCTCCTGGCGACAC
GAGGTGTCCATCGTGGCGTACGCGTTGCTGCTGCTCCTGCATAAGCGAGA
CGATCACGGCGAGGTCTGCGGCGGCGGCGGCGTTTCGGGGGCGGGGGCGG
GGGGGGACAGCCGGCCGCCCCCGCTCTGGCGCAAGGATCCCCTTCACGGG
CTGCCCGCGACGGTTGCCATACAGGCCAAGCACGTGGCGGGGATGCTCGT
GGGGCTGGTGGAGCTAGAGGAGTGCGAGAAGTGCAAGGCGCGGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13678:576..4171-

>mRNA_Ecto-sp13_S_contig13678.2898.1 ID=mRNA_Ecto-sp13_S_contig13678.2898.1|Name=mRNA_Ecto-sp13_S_contig13678.2898.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1266bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13678:576..4171- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGAACACACACACGCACACACAACAGCACACCCTCGAAGATCTCCG
GGCGGTCGTCGAGGAGTGCAGCTCGGCGGATAGGGGGAGGGTGGTGGTGG
TGACGTACGACCGGCGGGGGTTGAAGCAGACAGGCTCGGGACACTTCAGT
CCCGTCGGTGGCTATCACAAAGAGAAAGACCTCGTGCTCATCATGGACAC
CGCCCGCTTCAAGCTTCCCCCGCACTGGGCACCGCTGCCAATACTGTGGG
AGGCGATGCAGCGGGTGGATCCGGACACCGGGAGGCCGAGAGGCTACATG
GTGCTCGAGAAGGCGCACAGCCTGTCGCACCGTCTCTTCTACTCCAACGC
GAGAAACTACAAGGACTGGCCCAAGGTTGCATCGTGGGTGAACGAGATGA
TCGAGCTTGCCTGCGGTGAGCCGGAAGAGGAGAACGGTGACCTGTCGGGC
CTTGCCGGCGGCGACAACGACGATGCATCGAAATGCCCCGCCGGCGCCGC
CGTCGCCGCTCCCGCCGCCGACGTGCGCGAGTCTCGGAGGGCCCTCCGAG
AGGCGACGACCGTGGCGGAGTTCGTGCCGGCCCTGATGGCCCTCCTGCCC
CGGGAGGTGAAGGGCCTCCTCACGACCTTCGACACACCCGAACACGGGTC
GTCGTCGCTGGACGTGGAGGACCTCCTCTCCACCACGACGCCGGCGCCGC
CATTCAACGCCACCGACTACGCGTCCGGCAAGGCCCAAGACGCGCTTGTC
CTGCAGGCGATACAGGGCACCGACATATACCGAGAAGTGACCAACGTCGA
GCGGTACTCCCGCAGCAGCGACAAGCTCCAGCAGAATGAGAACCAGGCCG
CGGCCGCCGCCGCGCCGTCCTCTCCCTGTTGTGCCCCGACCCTCCCTTCG
CCGGCGGCGCCACCGCTGCCGCCGTCGCCTCCGGCTGTCCTCTCGCCGGC
GTCCGGCGCGCTGTCGTCGGCCTACTCGTTCTGCCCGAAGAGGTCAGGCT
GCGGGTGCTCCTGGCGACACGAGGTGTCCATCGTGGCGTACGCGTTGCTG
CTGCTCCTGCATAAGCGAGACGATCACGGCGAGGTCTGCGGCGGCGGCGG
CGTTTCGGGGGCGGGGGCGGGGGGGGACAGCCGGCCGCCCCCGCTCTGGC
GCAAGGATCCCCTTCACGGGCTGCCCGCGACGGTTGCCATACAGGCCAAG
CACGTGGCGGGGATGCTCGTGGGGCTGGTGGAGCTAGAGGAGTGCGAGAA
GTGCAAGGCGCGGTGA
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