prot_Ecto-sp13_S_contig13675.2897.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13675.2897.1
Unique Nameprot_Ecto-sp13_S_contig13675.2897.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length185
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13675.2897.1 vs. uniprot
Match: D7FNR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNR0_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 2.320e-63
Identity = 169/176 (96.02%), Postives = 170/176 (96.59%), Query Frame = 0 
Query:    1 MLERGWVTREEYQQLLHGDRLYSLHESEMEXXXXXXXXXXLRNKIGLRRKLWKQTQIGVVRRARARKKAEKRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--AERPPDVCRDPITLDDLGSWTWDFRASEAATPPVSCGATKSTKHGGGGGWKGKRFGVG 174
            MLERGWVTREEYQQLLHGDRLYSLHESEME XXXXXXXX LRNKIGLRRKLW+QTQIGVVRRARARKKAEK  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  AERPPDVCRDPITLDDLGSWTWDFRASEAATPPVSCGATKSTKHGGGGGWKGKRFGVG
Sbjct:    1 MLERGWVTREEYQQLLHGDRLYSLHESEMEEXXXXXXXX-LRNKIGLRRKLWRQTQIGVVRRARARKKAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERPPDVCRDPITLDDLGSWTWDFRASEAATPPVSCGATKSTKHGGGGGWKGKRFGVG 175
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BLAST of mRNA_Ecto-sp13_S_contig13675.2897.1 vs. uniprot
Match: A0A6H5LA95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA95_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 5.850e-58
Identity = 155/203 (76.35%), Postives = 159/203 (78.33%), Query Frame = 0 
Query:    1 MLERGWVTREEYQQLLHGDRLYSLHESEMEXXXXXXXXXXLRNKIGLRRKLWKQTQIGVVRRARARKKAEK-------------------------RNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--AERPPDVCRDPITLDDLGSWTWDFRASEAATPPVSCGATKSTKHGGGGGWKGKRFGVGVK 176
            MLERGWVTR+EYQQLLHGDRL+SLH+SEME   XXXXX  LRNKIGLRRKLWKQT+IGVVRRARARK AEK                         RN   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         AERPPDVCRDPITLDDLGSWTWDFRASEAATPPVSCGATKSTKHGGGGGWKGKRFGVG K
Sbjct:   43 MLERGWVTRDEYQQLLHGDRLFSLHKSEMEEQEXXXXXR-LRNKIGLRRKLWKQTRIGVVRRARARK-AEKVWVKSTQRAPPLPSPHTPPNVQCAHRNKAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSKKRKQPLAERPPDVCRDPITLDDLGSWTWDFRASEAATPPVSCGATKSTKHGGGGGWKGKRFGVGGK 243
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13675.2897.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNR0_ECTSI2.320e-6396.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LA95_9PHAE5.850e-5876.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 24..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13675contigEcto-sp13_S_contig13675:1665..2869 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13675.2897.1mRNA_Ecto-sp13_S_contig13675.2897.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13675 1665..3287 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13675.2897.1 ID=prot_Ecto-sp13_S_contig13675.2897.1|Name=mRNA_Ecto-sp13_S_contig13675.2897.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=185bp
MLERGWVTREEYQQLLHGDRLYSLHESEMEEQERQRRRRRLRNKIGLRRK
LWKQTQIGVVRRARARKKAEKRNKAGAAAAAAAADDLSKSGKVLTASSAA
AAAAAVDKRKKKKQPPAERPPDVCRDPITLDDLGSWTWDFRASEAATPPV
SCGATKSTKHGGGGGWKGKRFGVGVKGGRGCGVSG
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