prot_Ecto-sp13_S_contig13668.2891.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13668.2891.1
Unique Nameprot_Ecto-sp13_S_contig13668.2891.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length312
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13668.2891.1 vs. uniprot
Match: A0A6H5L9P4_9PHAE (MI domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9P4_9PHAE)

HSP 1 Score: 361 bits (926), Expect = 1.740e-114
Identity = 190/197 (96.45%), Postives = 195/197 (98.98%), Query Frame = 0 
Query:    1 MSEEVARKKGKDVVAEFAVSGELGEACTCLKEIDAEVRWAAVSEAVNDSFERKQKHRDALGVLLAAGARDGALSEEALLKGFGDVLDMVPDVCIDVPQATQYVASALAPLVLGGHVKLGPLLSSPCEGLMEGGKAAEFAVVAIKQVKAAAAADGLSDDEAAARASEFLAGGLDVPKLAAMLPFICRGDEAKATALLE 197
            MSEEVARKKGKDVVAEFAVSGELGEACTCLKEIDAEVRWAAVSEAVNDSFERKQKHRDALGV+LAAGA+DGALS+EALLKGFGDVLDMVPDVCIDVPQATQYVASALAPLVLGGHVKLGPLLSSPCEGLMEGGKAAEFAVVA+KQVKAAAAADGLSD+EAAARA E LAGGLDVPKLAAMLPFICRGDEAKATALLE
Sbjct:  723 MSEEVARKKGKDVVAEFAVSGELGEACTCLKEIDAEVRWAAVSEAVNDSFERKQKHRDALGVVLAAGAKDGALSKEALLKGFGDVLDMVPDVCIDVPQATQYVASALAPLVLGGHVKLGPLLSSPCEGLMEGGKAAEFAVVAMKQVKAAAAADGLSDEEAAARALELLAGGLDVPKLAAMLPFICRGDEAKATALLE 919
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BLAST of mRNA_Ecto-sp13_S_contig13668.2891.1 vs. uniprot
Match: D8LKQ5_ECTSI (Eukaryotic initiation factor 4G n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKQ5_ECTSI)

HSP 1 Score: 361 bits (926), Expect = 3.950e-114
Identity = 191/197 (96.95%), Postives = 193/197 (97.97%), Query Frame = 0 
Query:    1 MSEEVARKKGKDVVAEFAVSGELGEACTCLKEIDAEVRWAAVSEAVNDSFERKQKHRDALGVLLAAGARDGALSEEALLKGFGDVLDMVPDVCIDVPQATQYVASALAPLVLGGHVKLGPLLSSPCEGLMEGGKAAEFAVVAIKQVKAAAAADGLSDDEAAARASEFLAGGLDVPKLAAMLPFICRGDEAKATALLE 197
            MSEEVARKKGKDVVAEFAVSGELGEACTCL EIDAEVRWAAVSEAVNDSFERKQKHRDALGV+LAAGA+DGALSEEALLKGFGDVLDMVPDVCIDVPQATQYVASALAPLVLGGHVKLGPLLSSPCEGLMEGGKAAEFAVVAIKQVKAAAAADGLSDD AAARASE LAGGLDVPKLAAMLPFICRGDEAKAT LLE
Sbjct:  763 MSEEVARKKGKDVVAEFAVSGELGEACTCLMEIDAEVRWAAVSEAVNDSFERKQKHRDALGVVLAAGAKDGALSEEALLKGFGDVLDMVPDVCIDVPQATQYVASALAPLVLGGHVKLGPLLSSPCEGLMEGGKAAEFAVVAIKQVKAAAAADGLSDDAAAARASELLAGGLDVPKLAAMLPFICRGDEAKATELLE 959
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BLAST of mRNA_Ecto-sp13_S_contig13668.2891.1 vs. uniprot
Match: A0A7M5WWV8_9CNID (Uncharacterized protein n=2 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5WWV8_9CNID)

HSP 1 Score: 65.1 bits (157), Expect = 6.210e-8
Identity = 36/112 (32.14%), Postives = 58/112 (51.79%), Query Frame = 0 
Query:    1 MSEEVARKKGKDVVAEFAVSGELGEACTCLKEIDA-EVRWAAVSEAVNDSFERKQKHRDALGVLLAAGARDGALSEEALLKGFGDVLDMVPDVCIDVPQATQYVASALAPLV 111
            + E+  RKK K  + EF    +  EA  CLKE+DA  + WA V EA+  + E K ++R   G L     +D  +      KG   V+++ PD+ +D+P+   Y+   L P++
Sbjct: 1098 VDEDKMRKKTKSTIEEFFGVLDYKEAMLCLKELDAPHLHWAFVEEAIVIASEMKPQNRVNAGKLFCRMVKDNLIKFAEFQKGMSSVIEIAPDMAVDIPRFYAYMGEILGPMI 1209
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BLAST of mRNA_Ecto-sp13_S_contig13668.2891.1 vs. uniprot
Match: A0A2G9I8H0_9LAMI (Neoplastic transformation suppressor Pdcd4/MA-3, contains MA3 domain n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9I8H0_9LAMI)

HSP 1 Score: 57.8 bits (138), Expect = 1.280e-5
Identity = 32/103 (31.07%), Postives = 56/103 (54.37%), Query Frame = 0 
Query:    7 RKKGKDVVAEFAVSGELGEACTCLKEIDA-EVRWAAVSEAVNDSFERKQKHRDALGVLLAAGARDGALSEEALLKGFGDVLDMVPDVCIDVPQATQYVASALA 108
            + K  D + E+ VSG++ EAC C+KE++        V   V  + E++Q     L +L  A A +G ++   + KGFG ++D V D+ +D+P A   + S ++
Sbjct:  296 KAKINDFLIEYVVSGDIKEACRCIKELNVPHFHHEIVKRTVIMAMEKRQAESRLLNLLRRA-AEEGLINSSQMSKGFGRIIDTVDDLSLDIPNAKVLLQSLIS 397
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BLAST of mRNA_Ecto-sp13_S_contig13668.2891.1 vs. uniprot
Match: UPI000C1CF62C (programmed cell death protein 4 n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CF62C)

HSP 1 Score: 56.6 bits (135), Expect = 2.990e-5
Identity = 34/107 (31.78%), Postives = 60/107 (56.07%), Query Frame = 0 
Query:    5 VARKKGK--DVVAEFAVSGELGEACTCLKEIDAEV-RWAAVSEAVNDSFERKQKHRDALGVLLAAGARDGALSEEALLKGFGDVLDMVPDVCIDVPQATQYVASALA 108
            V   KGK  +++ E+ VSG++ EAC C+K+++        V  AV  + E K+K  + L  LL   A +G ++   + +GFG ++D V D+ +D+P A   + S ++
Sbjct:  287 VEELKGKINNLLIEYVVSGDVNEACRCIKDLNVPYFHHEIVKRAVIMAME-KRKAENCLLDLLKGAAEEGLINSSQISQGFGRIIDFVDDLSLDIPNAKVILQSLIS 392
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BLAST of mRNA_Ecto-sp13_S_contig13668.2891.1 vs. uniprot
Match: A0A830AXE3_9LAMI (Programmed cell death protein 4 n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830AXE3_9LAMI)

HSP 1 Score: 56.2 bits (134), Expect = 3.930e-5
Identity = 30/103 (29.13%), Postives = 56/103 (54.37%), Query Frame = 0 
Query:    7 RKKGKDVVAEFAVSGELGEACTCLKEIDA-EVRWAAVSEAVNDSFERKQKHRDALGVLLAAGARDGALSEEALLKGFGDVLDMVPDVCIDVPQATQYVASALA 108
            + K  D++ E+  SG++ EAC C+K++         V  AV  + E++Q     L +L  A + +G ++   + KGFG ++D V D+ +D+P A   + S ++
Sbjct:  255 KAKINDLLIEYVASGDVKEACRCIKDLHVPHFHHEIVKRAVLMAMEKRQAENHLLDLLKGA-SEEGLINSSQISKGFGRIIDSVDDLSLDIPNAKALLQSLIS 356
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13668.2891.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5L9P4_9PHAE1.740e-11496.45MI domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LKQ5_ECTSI3.950e-11496.95Eukaryotic initiation factor 4G n=1 Tax=Ectocarpus... [more]
A0A7M5WWV8_9CNID6.210e-832.14Uncharacterized protein n=2 Tax=Clytia hemisphaeri... [more]
A0A2G9I8H0_9LAMI1.280e-531.07Neoplastic transformation suppressor Pdcd4/MA-3, c... [more]
UPI000C1CF62C2.990e-531.78programmed cell death protein 4 n=1 Tax=Olea europ... [more]
A0A830AXE3_9LAMI3.930e-529.13Programmed cell death protein 4 n=1 Tax=Phtheirosp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003891Initiation factor eIF-4 gamma, MA3SMARTSM00544ma3_7coord: 6..117
e-value: 1.5E-10
score: 51.1
IPR003891Initiation factor eIF-4 gamma, MA3PFAMPF02847MA3coord: 7..115
e-value: 1.8E-12
score: 47.3
IPR003891Initiation factor eIF-4 gamma, MA3PROSITEPS51366MIcoord: 5..126
score: 15.819
IPR016021MIF4G-like domain superfamilyGENE3D1.25.40.180coord: 1..181
e-value: 3.7E-32
score: 113.4
IPR037585Eukaryotic translation initiation factor 4 gamma 3PANTHERPTHR23253:SF23EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 3coord: 2..177
NoneNo IPR availablePANTHERPTHR23253EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMAcoord: 2..177
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 1..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13668contigEcto-sp13_S_contig13668:288..2901 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13668.2891.1mRNA_Ecto-sp13_S_contig13668.2891.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13668 97..2957 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13668.2891.1 ID=prot_Ecto-sp13_S_contig13668.2891.1|Name=mRNA_Ecto-sp13_S_contig13668.2891.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=312bp
MSEEVARKKGKDVVAEFAVSGELGEACTCLKEIDAEVRWAAVSEAVNDSF
ERKQKHRDALGVLLAAGARDGALSEEALLKGFGDVLDMVPDVCIDVPQAT
QYVASALAPLVLGGHVKLGPLLSSPCEGLMEGGKAAEFAVVAIKQVKAAA
AADGLSDDEAAARASEFLAGGLDVPKLAAMLPFICRGDEAKATALLELFF
FSGKLACDHGNRPRQLLDQYGQVEVLDREIGTVFNAKTTATTTTNHPRDV
DSYREAWFPLARSGGGRGGEASALPSRWRVPVRFGCQFVGPNSRHPDGED
ATLSLSPLQPG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003891Initiation_fac_eIF4g_MI
IPR016021MIF4-like_sf
IPR037585EIF4G3
IPR016024ARM-type_fold