mRNA_Ecto-sp13_S_contig13661.2889.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13661.2889.1
Unique NamemRNA_Ecto-sp13_S_contig13661.2889.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13661.2889.1 vs. uniprot
Match: D8LR61_ECTSI (PA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR61_ECTSI)

HSP 1 Score: 390 bits (1002), Expect = 3.040e-132
Identity = 188/197 (95.43%), Postives = 195/197 (98.98%), Query Frame = 1 
Query:    1 QSSGSRLQFTIPSVLYRDEGYAHEEALFGIPKYGGTIAERIVHGGVEPGTAVKTWTLCSDEDVKDVTPMVPTDSPFILMVDRGDCTFASKVRKAQHMGAIGVIIADNTCLCKDEASGVCSKSGDTPCEQVEPIMADDGSGGDITIPSFLMKKMDATLIKNRLEGGQSVQAEMTWSLPAPDDRVEWSLWTSAMDTSAA 591
            +SSGSRLQFTIPSVLYRDEGYAHEEALFGIPKYGGTIAERIVHGGV+PG +V+TWTLCSD+DVKDV PMVPTDSPFILMVDRGDCTFASKVRKAQHMGAIGVIIADNTCLCKDEASG+C+KSGDTPCEQVEPIMADDGSGGDITIPSFLMKKMDATLIKNRLEGGQSVQAEMTWSLPAPDDRVEWSLWTSAMDTSAA
Sbjct:   27 ESSGSRLQFTIPSVLYRDEGYAHEEALFGIPKYGGTIAERIVHGGVDPGQSVRTWTLCSDDDVKDV-PMVPTDSPFILMVDRGDCTFASKVRKAQHMGAIGVIIADNTCLCKDEASGICNKSGDTPCEQVEPIMADDGSGGDITIPSFLMKKMDATLIKNRLEGGQSVQAEMTWSLPAPDDRVEWSLWTSAMDTSAA 222
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BLAST of mRNA_Ecto-sp13_S_contig13661.2889.1 vs. uniprot
Match: D8LR63_ECTSI (PA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR63_ECTSI)

HSP 1 Score: 238 bits (607), Expect = 8.320e-77
Identity = 123/190 (64.74%), Postives = 146/190 (76.84%), Query Frame = 1 
Query:    1 QSSGSRLQFTIPSVLYRDEGYAHEEALFGIPK--YGGTIAERIVHGGVEPGTAVKTWTLCSDEDVKDVTPMVPTD-SPFILMVDRGDCTFASKVRKAQHMGAIGVIIADNTCLCKDEASGVCSKSG---DTPCEQVEPIMADDGSGGDITIPSFLMKKMDATLIKNRLEGGQSVQAEMTWSLPAPDDRVE 552
            Q+  SRLQF +P+V+YR  GY HEEALFG P+  +GGTIAERI HGGV+PG AV+TWTLCS EDV+ V  M+P D SPFILMVDRG+CTFA+KVR AQ +GA+GVI ADNTC C DEA GVCS  G     PCE+  P + DDGSG DITIPSF+MKKMDA ++K+RL  G  V AEM+W +PAPD  +E
Sbjct:   27 QAVASRLQFPLPAVMYRGFGYEHEEALFG-PRHPFGGTIAERI-HGGVQPGIAVRTWTLCSSEDVELVLSMLPPDLSPFILMVDRGECTFATKVRTAQKLGAVGVIFADNTCRCIDEAIGVCSTFGTFGSLPCEEFGPAIGDDGSGADITIPSFMMKKMDARMVKSRLATGIPVVAEMSWPVPAPDGDIE 214
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BLAST of mRNA_Ecto-sp13_S_contig13661.2889.1 vs. uniprot
Match: D8LR62_ECTSI (PA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR62_ECTSI)

HSP 1 Score: 232 bits (592), Expect = 1.800e-74
Identity = 113/186 (60.75%), Postives = 140/186 (75.27%), Query Frame = 1 
Query:    1 QSSGSRLQFTIPSVLYRDEGYAHEEALFGIPK-YGGTIAERIVHGGVEPGTAVKTWTLCSDEDVKDVTPMVPTDS-PFILMVDRGDCTFASKVRKAQHMGAIGVIIADNTCLCKDEASGVCSKSGDTPCEQVEPIMADDGSGGDITIPSFLMKKMDATLIKNRLEGGQSVQAEMTWSLPAPDDRVE 552
            Q+  SRLQF +P+ L R  GY HEEALFG    YGG IAER++HGGV+PG AV+ WTLCS ED + V P++P DS PFILMVDRG+CTF +K R AQ +GA+GV+ AD+ C C D ASG+CS SG+  CE+  P + DDGSG DITIPS +M+KMDAT++KNRLE G  V A+M+WSL APD  +E
Sbjct:   33 QTVVSRLQFPLPTALSRALGYEHEEALFGPHHPYGGVIAERVIHGGVQPGKAVRAWTLCSIEDAELVLPILPPDSSPFILMVDRGECTFVTKTRWAQKLGAVGVLFADDMCQCSDAASGICSMSGNLHCEEFGPTVGDDGSGADITIPSLMMQKMDATIVKNRLEKGVPVMAKMSWSLAAPDGGIE 218
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BLAST of mRNA_Ecto-sp13_S_contig13661.2889.1 vs. uniprot
Match: A0A835YNB1_9STRA (PA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNB1_9STRA)

HSP 1 Score: 232 bits (591), Expect = 1.490e-70
Identity = 120/197 (60.91%), Postives = 143/197 (72.59%), Query Frame = 1 
Query:    7 SGSRLQFTIPSVLYRDEGYAHEEALFGIPKYGGTIAERIVHGGVEPGTAVKTWTLCSDEDV-KDVTPMVPTDSPFILMVDRG--DCTFASKVRKAQHMGAIGVIIADNTCLCKDEASGVCSKSGDTPCEQVEPIMADDGSGGDITIPSFLMKKMDATLIKNRLEGGQSVQAEMTWSLPAPDDRVEWSLWTSAMDTSA 588
            + SRLQ  IP+ L+R  GYAH+EALFGIP YGG IA+R+V+    PG     +TLCSD +  K V P      PFIL+VDRG  DCTF SKVR+AQH+GA GVII D+ C+C D   G C+ +    C+ VEPIMADDGSG DITIPSFLM KMD  +IK+ L+  Q +QAEMTWSLPAPDDRVEWSLWTSA D++A
Sbjct:   23 TSSRLQIQIPTELFRPAGYAHQEALFGIPHYGGAIAQRLVY----PGNYTDPYTLCSDSEADKFVNPA----QPFILLVDRGGQDCTFVSKVRRAQHLGAAGVIIVDDRCICGD---GACASA--VACQPVEPIMADDGSGADITIPSFLMTKMDGNIIKSHLQANQFIQAEMTWSLPAPDDRVEWSLWTSAQDSAA 206
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BLAST of mRNA_Ecto-sp13_S_contig13661.2889.1 vs. uniprot
Match: A0A836CIN2_9STRA (PA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIN2_9STRA)

HSP 1 Score: 223 bits (569), Expect = 8.560e-67
Identity = 118/198 (59.60%), Postives = 140/198 (70.71%), Query Frame = 1 
Query:    4 SSGSRLQFTIPSVLYRDEGYAHEEALFGIPKYGGTIAERIVHGGVEPGTAVKTWTLCSDEDVKDVTPMVPTDSPFILMVDRG--DCTFASKVRKAQHMGAIGVIIADNTCLCKDEASGVCSKSGDTPCEQVEPIMADDGSGGDITIPSFLMKKMDATLIKNRLEGGQSVQAEMTWSLPAPDDRVEWSLWTSAMDTSAA 591
            S  SRLQ  IP+ L+R  GY H+EALFGIP YGG+IA+R+V+    PG   + + LCSD D    T   P + PFIL+VDRG  DCTF SKVR+AQH+GA G IIAD+ C C  +A   C  S    CEQ+EPIMADDGSG DITIPSFLM K D  LIK  L+  + +Q EMTWSLPAPDDRVEWSLWT+A+D +AA
Sbjct:    4 SQSSRLQIQIPTELFRSAGYEHQEALFGIPHYGGSIAQRLVY----PGDFDQPYQLCSDVDAAKFTNPNP-NQPFILLVDRGGADCTFVSKVRRAQHLGAAGAIIADDRCKCAGDAQ--CDSS--VACEQLEPIMADDGSGADITIPSFLMTKTDGDLIKEHLKLKEFLQVEMTWSLPAPDDRVEWSLWTTAIDAAAA 192
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BLAST of mRNA_Ecto-sp13_S_contig13661.2889.1 vs. uniprot
Match: A0A4D9DEA6_9STRA (PA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DEA6_9STRA)

HSP 1 Score: 214 bits (546), Expect = 7.540e-64
Identity = 111/193 (57.51%), Postives = 131/193 (67.88%), Query Frame = 1 
Query:   13 SRLQFTIPSVLYRDEGYAHEEALFGIPKYGGTIAERIVHGGVEPGTAVKTWTLCSDEDVKDVTPMVPTDSPFILMVDRGDCTFASKVRKAQHMGAIGVIIADNTCLCKDEASGVCSKSGDTPCEQVEPIMADDGSGGDITIPSFLMKKMDATLIKNRLEGGQSVQAEMTWSLPAPDDRVEWSLWTSAMDTSAA 591
            SRLQ  IP  L++ +GY H+EALFGIP YGG IAE++ +          T  +CS     +V       SP+ILMVDRGDCTF +KVR AQH GA GV++ADN C+CKD A   C    DT C+ +EPIMADDGSG DITIPSFL+ K DA  IK +L     VQ EMTWSLP PDDRVEWSLWTSA D+S+A
Sbjct:   15 SRLQIQIPRDLFKPDGYNHKEALFGIPVYGGFIAEKLYYAN--------TTKMCSAPTADEVAQW---KSPYILMVDRGDCTFVTKVRHAQHAGASGVLVADNLCVCKDLA---CHPDPDTSCQGIEPIMADDGSGADITIPSFLLYKPDADAIKEKLRQESLVQVEMTWSLPTPDDRVEWSLWTSANDSSSA 193
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BLAST of mRNA_Ecto-sp13_S_contig13661.2889.1 vs. uniprot
Match: A0A6V1XHF6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1XHF6_HETAK)

HSP 1 Score: 202 bits (515), Expect = 2.080e-59
Identity = 106/195 (54.36%), Postives = 129/195 (66.15%), Query Frame = 1 
Query:   13 SRLQFTIPSVLYRDEGYAHEEALFGIPKYGGTIAERIVHGGVEPGTAVKTWTLCSDEDVKDVTPMVPTDS---PFILMVDRGDCTFASKVRKAQHMGAIGVIIADNTCLCKDEASGVCSKSGDTPCEQVEPIMADDGSGGDITIPSFLMKKMDATLIKNRLEGGQSVQAEMTWSLPAPDDRVEWSLWTSAMDTSA 588
            SRLQ  IP+ L R+ GYAH++ALFG P YGG+I+ ++ +             LC   D         TD+   PFILM DRGDCTF SKVR+AQH GA GV+IADN CLC D A      +    CE +EPIMADDGSG DITIP+FLMKK+DA L+K ++  GQ V AEM+W+LP PDDRVEW LWT+A+D  A
Sbjct:   29 SRLQMQIPASLEREGGYAHQQALFGKPSYGGSISLQLFY---------TNSALCEGADADPTKWKRNTDNKEAPFILMADRGDCTFVSKVRRAQHAGAAGVLIADNKCLCGDAAC-----TSQEACEPLEPIMADDGSGADITIPAFLMKKVDADLVKGQILQGQLVVAEMSWALPNPDDRVEWDLWTTAIDDGA 209
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BLAST of mRNA_Ecto-sp13_S_contig13661.2889.1 vs. uniprot
Match: A0A7S2LZB0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LZB0_9STRA)

HSP 1 Score: 192 bits (487), Expect = 6.400e-57
Identity = 100/192 (52.08%), Postives = 121/192 (63.02%), Query Frame = 1 
Query:   13 SRLQFTIPSVLYRDEGYAHEEALFGIPKYGGTIAERIVHGG---VEPGTAVKTWTLCSDEDVKDVTPMVPTDSPFILMVDRGDCTFASKVRKAQHMGAIGVIIADNTCLCKDEASGVCSKSGDTPCEQVEPIMADDGSGGDITIPSFLMKKMDATLIKNRLEGGQSVQAEMTWSLPAPDDRVEWSLWTSAMD 579
            SRLQ  +P  L+R EGY H EALFG+P YGG IA+ + +      +P    +       +D      M P  SP ILMVDRG C+F  KVR AQ  GA G IIADNTCLC D+     S +G   C+  EPIMADDGSGGDI+IPSFLM K+DA  +K  L+  Q VQ EM W+LP+PDDRVE+ LWT+  D
Sbjct:   39 SRLQVHVPQSLFRPEGYDHREALFGVPPYGGAIAQSVYYADSDLCDPTVDTRKGYPIRSKD--STGKMEPWPSPLILMVDRGGCSFVQKVRNAQKAGAAGAIIADNTCLCSDK--DCVSANGQAVCQPAEPIMADDGSGGDISIPSFLMFKVDADQVKAELKANQMVQIEMQWALPSPDDRVEYDLWTTPSD 226
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BLAST of mRNA_Ecto-sp13_S_contig13661.2889.1 vs. uniprot
Match: B7G5X7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G5X7_PHATC)

HSP 1 Score: 194 bits (494), Expect = 4.560e-56
Identity = 103/205 (50.24%), Postives = 130/205 (63.41%), Query Frame = 1 
Query:    4 SSGSRLQFTIPSVLYRDEGYAHEEALFGIPKYGGTIAERIVHGGVEPGTAVKTWTLCSDEDV--------KDVTPMVPTDSPFILMVDRGDCTFASKVRKAQHMGAIGVIIADNTCLCKDEASGVCSKSGDT-PCEQVEPIMADDGSGGDITIPSFLMKKMDATLIKNRLEGGQSVQAEMTWSLPAPDDRVEWSLWTSAMDTSAA 591
            S+ S+L   +P  LY++ GY H EALFGI  YGG+I + + +   +         LC  +D+        K+ T M P  SPF+LM+DRG CTF  KVR AQHMGA GV+IADNTC+C D     C+ +  T PCE  EPIMADDGSG DI+IPSFL+ K DA  I   ++  + VQAEM WSLP+PDDRVE+ LWTS  D  +A
Sbjct:   32 SNSSKLMIHVPHRLYQEGGYRHREALFGISPYGGSIVQNVYYTNSD---------LCEIDDMSGGFPAREKEGTRMKPYPSPFLLMMDRGHCTFVQKVRNAQHMGASGVLIADNTCICSDTT---CTAANPTAPCEMTEPIMADDGSGADISIPSFLLYKTDADKIIAEVKENRPVQAEMAWSLPSPDDRVEYDLWTSPSDGISA 224
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BLAST of mRNA_Ecto-sp13_S_contig13661.2889.1 vs. uniprot
Match: B8CDN3_THAPS (PA domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CDN3_THAPS)

HSP 1 Score: 193 bits (491), Expect = 7.760e-56
Identity = 101/190 (53.16%), Postives = 121/190 (63.68%), Query Frame = 1 
Query:   13 SRLQFTIPSVLYRDEGYAHEEALFGIPKYGGTIAERIVHGGVEPGTAVKTWTLCSDEDVKDVT-PMVPTDSPFILMVDRGDCTFASKVRKAQHMGAIGVIIADNTCLCKDEASGVCSKSGDTPCEQVEPIMADDGSGGDITIPSFLMKKMDATLIKNRLEGGQSVQAEMTWSLPAPDDRVEWSLWTSAMD 579
            SRLQ  +P  L+R EGY H EALFG+P YGG+IA+ + +   +                KD T  M P  SP+ILMVDRG C+F  KVR AQ  GA GV+IADNTCLC D+     S +G   C+  EPIMADDGSGGDI+IPSFLM K+DA  IK  L+    VQ EM W+LP PDDRVE+ LWT+  D
Sbjct:   26 SRLQVHVPQTLFRPEGYDHREALFGVPPYGGSIAQSVYYAASDLCDPTVDTRGGYPIRAKDNTGKMEPWPSPYILMVDRGGCSFVQKVRNAQRSGAAGVVIADNTCLCSDK--DCVSANGQDVCQPAEPIMADDGSGGDISIPSFLMFKVDADQIKAELQANHMVQVEMQWALPKPDDRVEYDLWTTPSD 213
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13661.2889.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR61_ECTSI3.040e-13295.43PA domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
D8LR63_ECTSI8.320e-7764.74PA domain-containing protein n=1 Tax=Ectocarpus si... [more]
D8LR62_ECTSI1.800e-7460.75PA domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A835YNB1_9STRA1.490e-7060.91PA domain-containing protein n=1 Tax=Tribonema min... [more]
A0A836CIN2_9STRA8.560e-6759.60PA domain-containing protein n=1 Tax=Tribonema min... [more]
A0A4D9DEA6_9STRA7.540e-6457.51PA domain-containing protein n=1 Tax=Nannochlorops... [more]
A0A6V1XHF6_HETAK2.080e-5954.36Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2LZB0_9STRA6.400e-5752.08Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
B7G5X7_PHATC4.560e-5650.24Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
B8CDN3_THAPS7.760e-5653.16PA domain-containing protein n=1 Tax=Thalassiosira... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13661contigEcto-sp13_S_contig13661:1631..4192 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score389.4
Seed ortholog evalue9.9e-106
Seed eggNOG ortholog2880.D8LR61
Preferred nameVSR1
Model size594
KEGG rclassRC00718
KEGG koko:K01859,ko:K17637
KEGG ReactionR02446,R06556,R07990,R07995
KEGG Pathwayko00941,ko01100,ko01110,ko04014,map00941,map01100,map01110,map04014
KEGG ModuleM00137
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0003674,GO:0005048,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005770,GO:0005773,GO:0005783,GO:0005794,GO:0005802,GO:0005886,GO:0006605,GO:0006623,GO:0006810,GO:0006886,GO:0006892,GO:0006896,GO:0007034,GO:0008104,GO:0008150,GO:0009940,GO:0010008,GO:0010209,GO:0012505,GO:0012506,GO:0015031,GO:0015833,GO:0016020,GO:0016192,GO:0030135,GO:0030136,GO:0030659,GO:0030662,GO:0030665,GO:0031090,GO:0031410,GO:0031902,GO:0031982,GO:0031984,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044431,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0048193,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705,GO:0071944,GO:0072594,GO:0072665,GO:0072666,GO:0097708,GO:0098588,GO:0098791,GO:0098805
Exons4
EggNOG free text desc.amino-terminal vacuolar sorting propeptide binding
EggNOG OGs28KFV@1,2QSX2@2759
EC5.5.1.6
Cds size594
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462729.559837-CDS-Ecto-sp13_S_contig13661:1630..17471681462729.559837-CDS-Ecto-sp13_S_contig13661:1630..1747Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13661 1631..1747 +
1681462729.5730927-CDS-Ecto-sp13_S_contig13661:2600..27531681462729.5730927-CDS-Ecto-sp13_S_contig13661:2600..2753Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13661 2601..2753 +
1681462729.582723-CDS-Ecto-sp13_S_contig13661:3396..35661681462729.582723-CDS-Ecto-sp13_S_contig13661:3396..3566Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13661 3397..3566 +
1681462729.5924726-CDS-Ecto-sp13_S_contig13661:4038..41921681462729.5924726-CDS-Ecto-sp13_S_contig13661:4038..4192Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13661 4039..4192 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13661.2889.1prot_Ecto-sp13_S_contig13661.2889.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13661 1631..4192 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13661.2889.1

>prot_Ecto-sp13_S_contig13661.2889.1 ID=prot_Ecto-sp13_S_contig13661.2889.1|Name=mRNA_Ecto-sp13_S_contig13661.2889.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=198bp
QSSGSRLQFTIPSVLYRDEGYAHEEALFGIPKYGGTIAERIVHGGVEPGT
AVKTWTLCSDEDVKDVTPMVPTDSPFILMVDRGDCTFASKVRKAQHMGAI
GVIIADNTCLCKDEASGVCSKSGDTPCEQVEPIMADDGSGGDITIPSFLM
KKMDATLIKNRLEGGQSVQAEMTWSLPAPDDRVEWSLWTSAMDTSAAV
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mRNA from alignment at Ecto-sp13_S_contig13661:1631..4192+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13661.2889.1 ID=mRNA_Ecto-sp13_S_contig13661.2889.1|Name=mRNA_Ecto-sp13_S_contig13661.2889.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2562bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13661:1631..4192+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGAGCTCCGGTTCTCGGCTGCAGTTCACCATCCCGAGTGTGCTGTACCG
CGACGAGGGCTACGCGCACGAGGAGGCGTTGTTCGGCATTCCCAAGTACG
GCGGGACCATTGCCGAGGTGGGAAGCGATGTTGTGCTGTAGCTGGAGCAG
CGAGGCTTGATGTCTACTGCTGTACCGTTCGGTGCCGCTTTTATCCTCTC
GCGTACGTATTTGTATGGACGGCGACTGTTTTTTCCGTTGATGTCTGCCA
TCATCGTAGGGTCTAAATCGTCGCAGGGAAGGAACAGAAGATCGACCGAT
CAGATCGACGACATGAATCGCGTTTTTCTCACATTTTTTTTTTTTGCGTT
GTTTGAAGGAAAGAACGGCGTTGCAAGCAGCACGGAAGAAACATAATGCA
TACGCAACAAGAGGAAGCACAGAGAATGGATCCCCCCCCCCTCCCCGGTT
TCTCACTTTTTTATCGTCGGCGAGGGCGGGGTGTCCTCATCTCTTGCGTA
CCTACCGTGCGGGCACACCCAAGGGTGGACAGATCGTTGTTCCTCGGCGC
AGCGACGGATGGTCCCCCCTCTTCCGCCGCCTGTGACACCTGCCCCACCC
CCCCCCCCCCCCCCCCCCCCCACAATCGACCACACGAATCCTCAATCCCA
CCCCCCCCCCCGCGATACNNNNNNNNNNTCTTTTGTGGCGCCGCGGGCGG
GCGGGCCCCCCCCCCCCTCCCCCCGCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCGAATGACTTGCAACCTCCGTGTGCGGCCGGTAAATAACCTTTG
ACGCTGCTGGCATAGCTCGTTGTGTTTCCAAGCATGAACGAGCCCGTCTT
GTTCCAATAGCCACGCGAGTACAATCAGCCGACACCCCGGCTGAACAGCT
AACCATGTTGTCTCTCTGACTGGACGCGTCACCCCCCTCACCATGTCTCA
TCTCCCCCTTTGTCTGCCAGAGGATCGTGCACGGCGGCGTGGAGCCGGGT
ACGGCGGTAAAGACGTGGACTTTGTGCAGCGATGAGGACGTGAAGGACGT
TACCCCCATGGTGCCGACGGACTCTCCTTTCATCCTCATGGTGGACCGAG
GGGACTGCACCTTCGCCAGCAAGGTCGGTGTTTGTGCCTGTGTGTGTGTC
TGTGTGTCTGTGTGATTTTATTTTTTTGCACCGACCACGCTAACCGGCTG
TCCAATAAAAATTCGCCTGTGTTTGTTTGTGTTGAGATCGACCGCGCGCA
ACCGGCTGGCCTATGAAAGGACGTCATGTGTGTGTGTTGTGTCGTGGCGC
TTTCTTTTTGTTGCTGTTGAAAAAAAATTACAATCCCTTGCTGCCGTCGG
TTGTGGGGGCTCCGGTTGCCGTACTGTACGTGAGTAGAGCCTCTTCCGGT
TTGTCTATGCTACGCTAAAACCTGTAGGCTTCCGTGCCTTTTGGAGGAGT
GTTTTGTTCTTTCACCCGGCCACTTTTTCCGTATGCTCGGCTCATGTGTT
GTTTTGTTTTGTTTTTTTCATGCTGTAAGCTCCGACTACACTAATGCTTC
TTTGGGGTAACGTAGAGGTTGGAAAGTGCTCTCCTTTTTCCGAGGGTAGT
GTTGTTGTTGTTGTCGTGTGTTCCTTTGTTGCTCTCTTCTTGCTGTGACT
TACATCGTCCCCCTCCCTCCCTGCTGCCCGCTGTTGTCTTTTTTGGCCCC
TTCACCTCCGTGCCTGCCTGCCTGCCTGCCTGCCTGCCTTCGCCGTCAAC
GCCGTCGTTTACCCAGGTGCGGAAGGCGCAGCACATGGGGGCGATCGGGG
TGATCATCGCGGACAACACGTGCCTGTGCAAGGACGAGGCCAGCGGCGTC
TGCAGCAAGTCCGGCGACACCCCCTGCGAACAGGTGGAACCCATCATGGC
AGACGACGGCTCAGGCGGTGACATCACCATACCCAGGTGAGCCGCCGGCT
GGGTAGGGGATTTCGCGTCAGAGGCTAGTTTGTTCGTGTATTGCCACCAA
CAAGTGACAGGCGAAGAATGAAAGAGTTTGCACGACGGTGTGCGCAGGTT
ATTTCGCGAGCGATGCGGACGTTGGCCGTCGGAATGCAGTAAAGCACGAG
CGTTTTGCTGTGCTGCGCATGCGGAGAGAGGTGTTCTGTCCACGTTGGAG
ATCCGCGTTGGGCCAATACCGAAGCGCACGCAACAGACCTCGAATGATTT
GGTTGTTCTAAAGGAGAGGAATAGCAATAGCGCCGGTGCTACTACTCGAC
GTGCATGCTGCATCAGGTACCTGCGTCACGTCTAAGGCGACCACCTTACT
CACCAAGATTCCATGTGGCACTCAATACATATTTGTGTTCAAACGTCCCT
TGCCTTCGCTGCAACTGAATGTTGTTTGCAACTCCACGCCCAATCCTTGC
GCATGAAGCTTCCTGATGAAGAAGATGGACGCGACTCTTATCAAGAACCG
ACTGGAGGGTGGTCAGAGCGTCCAGGCCGAGATGACCTGGTCCCTGCCTG
CCCCCGACGACCGTGTGGAGTGGTCGCTGTGGACCTCCGCCATGGACACG
TCTGCAGCGGTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13661:1631..4192+

>mRNA_Ecto-sp13_S_contig13661.2889.1 ID=mRNA_Ecto-sp13_S_contig13661.2889.1|Name=mRNA_Ecto-sp13_S_contig13661.2889.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=594bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13661:1631..4192+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGAGCTCCGGTTCTCGGCTGCAGTTCACCATCCCGAGTGTGCTGTACCG
CGACGAGGGCTACGCGCACGAGGAGGCGTTGTTCGGCATTCCCAAGTACG
GCGGGACCATTGCCGAGAGGATCGTGCACGGCGGCGTGGAGCCGGGTACG
GCGGTAAAGACGTGGACTTTGTGCAGCGATGAGGACGTGAAGGACGTTAC
CCCCATGGTGCCGACGGACTCTCCTTTCATCCTCATGGTGGACCGAGGGG
ACTGCACCTTCGCCAGCAAGGTGCGGAAGGCGCAGCACATGGGGGCGATC
GGGGTGATCATCGCGGACAACACGTGCCTGTGCAAGGACGAGGCCAGCGG
CGTCTGCAGCAAGTCCGGCGACACCCCCTGCGAACAGGTGGAACCCATCA
TGGCAGACGACGGCTCAGGCGGTGACATCACCATACCCAGCTTCCTGATG
AAGAAGATGGACGCGACTCTTATCAAGAACCGACTGGAGGGTGGTCAGAG
CGTCCAGGCCGAGATGACCTGGTCCCTGCCTGCCCCCGACGACCGTGTGG
AGTGGTCGCTGTGGACCTCCGCCATGGACACGTCTGCAGCGGTG
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