prot_Ecto-sp13_S_contig13659.2885.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13659.2885.1
Unique Nameprot_Ecto-sp13_S_contig13659.2885.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length447
Homology
BLAST of mRNA_Ecto-sp13_S_contig13659.2885.1 vs. uniprot
Match: D8LBK9_ECTSI (OmpA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK9_ECTSI)

HSP 1 Score: 625 bits (1612), Expect = 1.200e-202
Identity = 383/448 (85.49%), Postives = 386/448 (86.16%), Query Frame = 0
Query:    1 RASDLAGNVAATSYFDWTVDTNVPDTVVVACPSSVASSPLATFKILDTVGAEQDEGHFEYSRLDPVDDAAVWATTSNTTLEFLGLQDGTHVLTVRARETLAEGGSSDQVPEVVTWEVDTECPDTTFVVLPEVVTHLTSTVLVVEGGPDAASFEYALDPIETNT--DNDHDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVWQQGDSSGVIHLYDLEEGRHEIRVRAVDSAGNADPSPATYSWIVDRAGVYGHPSMVTDVVAEGGNKQAFVQWSAAADDGGGELTKYVVIASTAYADINVEAITSVHATEDVEEGEGEAGQDEAAGGVAGGGGGVLPTEATVEGLTNGLVYSFQVVAANAFGYSTRSLPSNKVVTHDPADPCGLVTCGDHGSCFVQRSQSNALRGYCVCHPG 446
            RASDLAGNVAATSYFDWTVDTNVPDTVVVACPSSVASSP+ATFKILDTVGAEQDEGHFEY RLDP+DD A WATTSNTTLEFLGLQDGTH LTVRARETLAEGGSSDQVPEVVTWEVDTECPDTTFVVLPEVVTHLTSTVLVVEGGPDAASFEYALDPIETNT  DNDHD     XXXXXXXX     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       AGVVWQQGDSSGVIHLYDLEEGRHEIRVRAVDSAGNADPSPATYSWIVDRAGVYGHPSMVTDVVAEGGNKQA VQWSAAADDGGG+LTKYVVIASTAYADINVEA                                      TVEGLTNGLVYSFQVVAANAFGYSTRSLPSNKVVTHDPADPCGLVTCGDHGSCFVQRSQSNALRGYCVCHPG
Sbjct: 1477 RASDLAGNVAATSYFDWTVDTNVPDTVVVACPSSVASSPMATFKILDTVGAEQDEGHFEY-RLDPLDDDAAWATTSNTTLEFLGLQDGTHALTVRARETLAEGGSSDQVPEVVTWEVDTECPDTTFVVLPEVVTHLTSTVLVVEGGPDAASFEYALDPIETNTNTDNDHD-----XXXXXXXXAEEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGEGEEAGVVWQQGDSSGVIHLYDLEEGRHEIRVRAVDSAGNADPSPATYSWIVDRAGVYGHPSMVTDVVAEGGNKQAIVQWSAAADDGGGDLTKYVVIASTAYADINVEA--------------------------------------TVEGLTNGLVYSFQVVAANAFGYSTRSLPSNKVVTHDPADPCGLVTCGDHGSCFVQRSQSNALRGYCVCHPG 1880          
BLAST of mRNA_Ecto-sp13_S_contig13659.2885.1 vs. uniprot
Match: A0A6H5K857_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K857_9PHAE)

HSP 1 Score: 482 bits (1241), Expect = 1.110e-150
Identity = 302/338 (89.35%), Postives = 306/338 (90.53%), Query Frame = 0
Query:    1 RASDLAGNVAATSYFDWTVDTNVPDTVVVACPSSVASSPLATFKILDTVGAEQDEGHFEYSRLDPVDDAAVWATTSNTTLEFLGLQDGTHVLTVRARETLAEGGSSDQVPEVVTWEVDTECPDTTFVVLPEVVTHLTSTVLVVEGGPDAASFEYALDPIETNTDNDHDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVWQQGDSSGVIHLYDLEEGRHEIRVRAVDSAGNADPSPATYSWIVDRAGVYGHPSMVTDVVAEGGNKQAFVQWSAAADDGGGELTKYVVIASTAYADINVEAIT 338
            RASDLAGNVAATSYFDWTVDTNVPDTVVVACPSSVASSPLATFKILDTVGAEQDEGHFEY RLDP+DD   W TTSNTTLEF+GLQDGTH LTVRARETLAEGGSSDQVPEVVTWEVDTECPDTTFVVLPEVVTHLTSTVLVVEGGPDAASFEY LDPIETN DN               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        AGVVW+QGDSSGVIHLYDLEEGRHEIRVRAVDSAGNADPSPATYSWIVDRA VYGHPSMVTDVVAEGGNKQAFVQWSAAADDGGG+LTKYVVIASTAYADINVEAIT
Sbjct: 1283 RASDLAGNVAATSYFDWTVDTNVPDTVVVACPSSVASSPLATFKILDTVGAEQDEGHFEY-RLDPLDDDTAWTTTSNTTLEFMGLQDGTHALTVRARETLAEGGSSDQVPEVVTWEVDTECPDTTFVVLPEVVTHLTSTVLVVEGGPDAASFEYTLDPIETNADN---------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEGKGEEAGVVWEQGDSSGVIHLYDLEEGRHEIRVRAVDSAGNADPSPATYSWIVDRADVYGHPSMVTDVVAEGGNKQAFVQWSAAADDGGGDLTKYVVIASTAYADINVEAIT 1604          
BLAST of mRNA_Ecto-sp13_S_contig13659.2885.1 vs. uniprot
Match: A0A835Z7B5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7B5_9STRA)

HSP 1 Score: 133 bits (334), Expect = 5.390e-33
Identity = 94/261 (36.02%), Postives = 118/261 (45.21%), Query Frame = 0
Query:   45 ILDTVGAEQDEG-HFEYSRLDPVDDAAVWATTSNTTLEFLGLQDGTHVLTVRARETLAEGGSSDQVPEVVTWEVDTECPDTTFVVLPEVVTHLTSTVLVVEGGPDAASFEYALDPIETNTDNDHDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVV--W-QQGDSSGVIHLYDLEEGRHEIRVRAVDSAGNADPSPATYSWIVDRAGVYGHPSMVTDVVAEGGNK 301
            +LDTVG     G H+E+     +D+A  W   +   +E  GL +G+H +T+RA         +D VP    W VDT  PDT+ VV P  VTHL S +LV  G    A+FEY LD       N                                                                  AGV   W    D++ V+HLYDL EG H +RVRAVD+AGNAD SPA + WIVDRAGVYG PSM +DVVA GG++
Sbjct:    1 LLDTVGGGSGGGGHYEWR----LDEAQHWRRAAQPLIEVRGLSEGSHSVTIRAVRGGXXXXXADAVPVRYAWTVDTRAPDTSIVVYPSTVTHLRSAILVFSGSEPGATFEYRLDGGAETALN-------------------------------------------------------VTAAAAAAAPAAGVAETWLAPPDNTSVLHLYDLAEGAHVLRVRAVDAAGNADASPAVHKWIVDRAGVYGPPSMPSDVVAGGGDQ 202          
BLAST of mRNA_Ecto-sp13_S_contig13659.2885.1 vs. uniprot
Match: UPI001F082607 (OmpA family protein n=1 Tax=Myxococcus vastator TaxID=2709664 RepID=UPI001F082607)

HSP 1 Score: 90.9 bits (224), Expect = 1.200e-15
Identity = 83/283 (29.33%), Postives = 106/283 (37.46%), Query Frame = 0
Query:    1 RASDLAGNVAAT-SYFDWTVDTNVPDTVVVACPSSVASSPLATFKILDTVGAEQDEGHFEYSRLDPVDDAAVWATTSNTTLEFLGLQDGTHVLTVRARETLAEGGSSDQVPEVVTWEVDTECPDTTFVVLPEVVTHLTSTVLVVEGGPDAASFEYALD--PIETNTDNDHDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVWQQGDSSGVIHLYDLEEGRHEIRVRAVDSAGNADPSPATYSWIVD 280
            RA D AGNV  T + ++WTVDT  PDT +V+ P +  +S  ATF        + +E    Y     +D A V   T+  T  F GL DG+H L V A +   E G++D  P   TW VD   PDTT V  P  VT+ TS          + ++E +LD  P    TD                                                                                     L EG H + VRAVD AGN DP+PATY+W VD
Sbjct:  309 RAVDSAGNVDPTPAEYEWTVDTTAPDTAIVSAPPATTTSSSATFDF------DSNESPVTYQC--SLDGAPVVPCTNPVT--FTGLADGSHTLVVFAVD---EAGNADVTPATYTWTVDATAPDTTIVSGPPAVTNSTSATFDFSSNESSVTYECSLDGGPFVPCTDPQT-------------------------------------------------------------------------------FTGLAEGNHTLEVRAVDVAGNVDPTPATYAWTVD 499          
BLAST of mRNA_Ecto-sp13_S_contig13659.2885.1 vs. uniprot
Match: UPI001F50C2B8 (Ig-like domain-containing protein n=2 Tax=Pyxidicoccus sp. SCPEA002 TaxID=2813578 RepID=UPI001F50C2B8)

HSP 1 Score: 90.5 bits (223), Expect = 1.790e-15
Identity = 86/306 (28.10%), Postives = 115/306 (37.58%), Query Frame = 0
Query:    1 RASDLAGNVAAT-SYFDWTVDTNVPDTVVVACPSSVASSPLATFKILDTVGAEQDEGHFEYSRLDPVDDAAVWATTSNTTLEFLGLQDGTHVLTVRARETLAEGGSSDQVPEVVTWEVDTECPDTTFVVLPEVVTHLTSTVLVVEGGPDAASFEYALDPIETNTDNDHDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVWQQGDSSGV--------IHLYDLEEGRHEIRVRAVDSAGNADPSPATYSWIVDRAG----VYGHPSMVTD 293
            RA D AGNV  T + + WTVDT+ PDT +V+ P+   +S  ATF          +E    Y     +D AA  A T   T  F GL DG+H L+VRA +     G+ D  P   TW VD   PDTT V  P  VT+ T+            ++E +LD        D                                                                    V  Q    G         +    L +G H + VRAVD+AGN DP+PAT++W VDR      +   P++VT+
Sbjct: 1134 RAVDSAGNVDPTPATYTWTVDTSPPDTTIVSGPTGSTTSTSATFDF------SSNESPVTYQC--SLDGAAFTACTDPVT--FTGLADGSHTLSVRAVDA---AGNVDPTPATRTWTVDRTAPDTTIVSGPATVTNATTATFDFTSNESPVTYECSLDGAAFTACTDPVTFSGLADGGHTLSVRARDAAGNVDPTPATYAWTVDRTAPDTTIVSGPPALTSSTSATFDFSSNESPVTYQCSLDGAAFAACTDPVTFSGLADGNHTLSVRAVDAAGNVDPTPATHAWTVDRTAPDTTIVSGPALVTN 1426          
BLAST of mRNA_Ecto-sp13_S_contig13659.2885.1 vs. uniprot
Match: A0A0G2ZEH0_9DELT (Ig-like protein group 3 n=1 Tax=Archangium gephyra TaxID=48 RepID=A0A0G2ZEH0_9DELT)

HSP 1 Score: 89.7 bits (221), Expect = 2.700e-15
Identity = 82/290 (28.28%), Postives = 114/290 (39.31%), Query Frame = 0
Query:    1 RASDLAGNVAAT-SYFDWTVDTNVPDTVVVACPSSVASSPLATFKILDTVGAEQDEGHFEYSRLDPVDDAAVWATTSNTTLEFLGLQDGTHVLTVRARETLAEGGSSDQVPEVVTWEVDTECPDTTFVVLPEVVTHLTSTVLVVEGGPDAASFEYALDPIETNTDNDHDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVWQQG-------DSSGVIHLYDLEEGRHEIRVRAVDSAGNADPSPATYSWIVDRA 282
            RA D+AGNV  T + + WTVD  VPDT +V+ P ++ +SP ATF      GA         + +  +D A  ++  S+    F  L DG H L V A +     G+ D  P V TW VD   PDTT V  P  +T++TS           A+FE +LD        D +                                                               AG  ++           +G +    L +G H  +VRAVD+AGN DP+PA+Y+W VD A
Sbjct:  779 RARDVAGNVDPTPASYTWTVDLTVPDTTIVSGPPALTNSPSATFDFSSEAGA---------TFMCRLDTALTFSPCSDPET-FTALGDGAHRLEVSAVDA---AGNMDPTPAVYTWTVDLTPPDTTIVSGPPSLTNVTSATFDFSSEA-GATFECSLDGAAFTACADPETFTGLTEKAYTLQVRARDAAGNVDPTPASYTWTVDFSAPETTLVSNPPNPSNSPDATFDFSSEAGATFECSLDGAPFTPCTGPVSFTGLGDGSHTFQVRAVDAAGNVDPTPASYTWTVDAA 1054          
BLAST of mRNA_Ecto-sp13_S_contig13659.2885.1 vs. uniprot
Match: UPI001F0823DD (Ig-like domain-containing protein n=1 Tax=Pyxidicoccus trucidator TaxID=2709662 RepID=UPI001F0823DD)

HSP 1 Score: 88.6 bits (218), Expect = 7.300e-15
Identity = 82/289 (28.37%), Postives = 110/289 (38.06%), Query Frame = 0
Query:    1 RASDLAGNVAAT-SYFDWTVDTNVPDTVVVACPSSVASSPLATFKILDTVGAEQDEGHFEYSRLDPVDDAAVWATTSNTTLEFLGLQDGTHVLTVRARETLAEGGSSDQVPEVVTWEVDTECPDTTFVVLPEVVTHLTSTVLVVEGGPDAASFEYALDPIETNTDNDHDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVWQQGDSSGV--------IHLYDLEEGRHEIRVRAVDSAGNADPSPATYSWIVD 280
            RA D AGNV  T +   WTVDT+ PDT +V+ P++V S+  ATF       + +    +E S    +D AA  A T   T  F GL +G H L VRAR+     G+ D  P    W VDT  PDTT V  P  +T+ T+            +++ +LD        D                                                                    V  Q    G         + L ++  G H + VRAVD+AGN DP+PATY+W VD
Sbjct:  972 RAVDAAGNVDPTPATRSWTVDTSAPDTTIVSGPAAVTSATTATFDF----SSNESPVTYECS----LDGAAFVACTDPVT--FSGLANGNHTLAVRARDA---AGNVDPTPATHAWTVDTTVPDTTIVSGPPALTNSTTATFDFSSNESPVTYQCSLDGAAFVACTDPRTFTGLANGNHTLAVRAVDAAGNVDPTPATHAWTVDATVPDTTIVSGPALVTNATTATFDFSSNESPVTYQCSVDGAAFAACTDPLTLSNVSAGNHTLAVRAVDAAGNVDPTPATYAWTVD 1247          
BLAST of mRNA_Ecto-sp13_S_contig13659.2885.1 vs. uniprot
Match: UPI001F08862D (Ig-like domain-containing protein n=1 Tax=Pyxidicoccus caerfyrddinensis TaxID=2709663 RepID=UPI001F08862D)

HSP 1 Score: 87.8 bits (216), Expect = 1.320e-14
Identity = 83/290 (28.62%), Postives = 109/290 (37.59%), Query Frame = 0
Query:    1 RASDLAGNVAAT-SYFDWTVDTNVPDTVVVACPSSVASSPLATFKILDTVGAEQDEGHFEYSRLDPVDDAAVWATTSNTTLEFLGLQDGTHVLTVRARETLAEGGSSDQVPEVVTWEVDTECPDTTFVVLPEVVTHLTSTVLVVEGGPDAASFEYALDPIETNTDNDHDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVWQQGDSSGV--------IHLYDLEEGRHEIRVRAVDSAGNADPSPATYSWIVDR 281
            RA D AGNV  T +   WTVDT+ PDT +V+ P++V ++  ATF       + +    +E S    +D AA  A T   T  F GL  G H L+VRAR+     G+ D  P    W VDT  PDTT V  P  +T+  S            +++ +LD        D                                                                    V  Q    G         +    L EG H + VRAVD+AGN DP+PATY+W VDR
Sbjct: 1192 RAVDAAGNVDPTPATRAWTVDTSAPDTTIVSGPATVTNATTATFDFT----SNESPVTYECS----LDGAAFVACTDPVT--FSGLAQGNHTLSVRARDA---AGNVDASPATYAWTVDTTAPDTTIVSGPPALTNSNSATFDFSSNESPVTYQCSLDGAAFVACTDPRTYTGLADGNHTLAVRAVDAAGNVDASPATHAWTVDTTPPNTVIDSGPAAQTNATTATFNFSSPDSPVTYQCSLDGAAFTACTDPVTFTGLVEGGHTLAVRAVDAAGNVDPTPATYNWTVDR 1468          
BLAST of mRNA_Ecto-sp13_S_contig13659.2885.1 vs. uniprot
Match: A0A4Y6CFA7_MYXXA (Cell envelope biogenesis protein OmpA n=19 Tax=Proteobacteria TaxID=1224 RepID=A0A4Y6CFA7_MYXXA)

HSP 1 Score: 87.0 bits (214), Expect = 2.260e-14
Identity = 84/283 (29.68%), Postives = 105/283 (37.10%), Query Frame = 0
Query:    1 RASDLAGNVAAT-SYFDWTVDTNVPDTVVVACPSSVASSPLATFKILDTVGAEQDEGHFEYSRLDPVDDAAVWATTSNTTLEFLGLQDGTHVLTVRARETLAEGGSSDQVPEVVTWEVDTECPDTTFVVLPEVVTHLTSTVLVVEGGPDAASFEYALD--PIETNTDNDHDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVWQQGDSSGVIHLYDLEEGRHEIRVRAVDSAGNADPSPATYSWIVD 280
            RA D AGNV  T + + WTVDT  PDT +V+ PS   +S  ATF          +E    Y     +D A   A +   TL   GL DG H L VRA +     G+ D  P   TW VD   PDTT V  P  VT+ TS            +++ +LD  P  T TD                                                                         Q  ++       L EG H + VRAVD+AGN DP+PATY+W VD
Sbjct:  608 RAVDAAGNVDPTPATYAWTVDTTAPDTTIVSGPSGTTTSSSATFDF------SSNESPVTYQC--SLDGAPFTACSDPQTLT--GLADGEHTLAVRAVDA---AGNEDPTPATRTWTVDATAPDTTIVSGPAAVTNATSATFDFSSNESPVTYQCSLDGAPFATCTD------------------------------------------------------------------------PQSYTA-------LPEGEHTLAVRAVDAAGNMDPTPATYAWTVD 798          
BLAST of mRNA_Ecto-sp13_S_contig13659.2885.1 vs. uniprot
Match: A0A848LS83_9DELT (OmpA family protein n=1 Tax=Pyxidicoccus fallax TaxID=394095 RepID=A0A848LS83_9DELT)

HSP 1 Score: 86.7 bits (213), Expect = 3.060e-14
Identity = 83/290 (28.62%), Postives = 107/290 (36.90%), Query Frame = 0
Query:    1 RASDLAGNVAAT-SYFDWTVDTNVPDTVVVACPSSVASSPLATFKILDTVGAEQDEGHFEYSRLDPVDDAAVWATTSNTTLEFLGLQDGTHVLTVRARETLAEGGSSDQVPEVVTWEVDTECPDTTFVVLPEVVTHLTSTVLVVEGGPDAASFEYALDPIETNTDNDHDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVWQQGDSSGVI---------HLYDLEEGRHEIRVRAVDSAGNADPSPATYSWIVD 280
            RA D AGNV  T +   WTVDT  PDT +V+ P++V ++  ATF       +      FE S    +D AA  A T   T  F GL +G H L+VRAR+T    G+ D  P    W +D+  PDTT V  P  VT  TS            ++E +LD        D                                                                    V  +    G +             L  G H + VRAVD+AGN DP+PATY+W VD
Sbjct:  502 RAVDAAGNVDPTPATRTWTVDTVAPDTTIVSGPATVTNATSATFDF----SSNDATAPFECS----LDGAAYVACTDPRT--FTGLAEGNHTLSVRARDT---AGNVDATPATYAWTIDSTVPDTTIVSGPSGVTASTSATFDFSSPESPVTYECSLDGATFAACTDPQTFTGLAQGSHTLAVRARDAAGNVDPTPATRTWTVDTVAPDTTFTSTPPTRSNSAVANFDFNSNESPVTYECRLDGAVLFTACADPSSFTGLTNGSHTLEVRAVDAAGNVDPTPATYTWTVD 778          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13659.2885.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBK9_ECTSI1.200e-20285.49OmpA domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5K857_9PHAE1.110e-15089.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z7B5_9STRA5.390e-3336.02Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
UPI001F0826071.200e-1529.33OmpA family protein n=1 Tax=Myxococcus vastator Ta... [more]
UPI001F50C2B81.790e-1528.10Ig-like domain-containing protein n=2 Tax=Pyxidico... [more]
A0A0G2ZEH0_9DELT2.700e-1528.28Ig-like protein group 3 n=1 Tax=Archangium gephyra... [more]
UPI001F0823DD7.300e-1528.37Ig-like domain-containing protein n=1 Tax=Pyxidico... [more]
UPI001F08862D1.320e-1428.62Ig-like domain-containing protein n=1 Tax=Pyxidico... [more]
A0A4Y6CFA7_MYXXA2.260e-1429.68Cell envelope biogenesis protein OmpA n=19 Tax=Pro... [more]
A0A848LS83_9DELT3.060e-1428.62OmpA family protein n=1 Tax=Pyxidicoccus fallax Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 288..398
e-value: 4.5E-5
score: 32.8
coord: 63..268
e-value: 44.0
score: 5.9
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 278..414
e-value: 1.7E-12
score: 49.4
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 278..408

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13659contigEcto-sp13_S_contig13659:547..4631 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13659.2885.1mRNA_Ecto-sp13_S_contig13659.2885.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13659 547..4631 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13659.2885.1 ID=prot_Ecto-sp13_S_contig13659.2885.1|Name=mRNA_Ecto-sp13_S_contig13659.2885.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=447bp
RASDLAGNVAATSYFDWTVDTNVPDTVVVACPSSVASSPLATFKILDTVG
AEQDEGHFEYSRLDPVDDAAVWATTSNTTLEFLGLQDGTHVLTVRARETL
AEGGSSDQVPEVVTWEVDTECPDTTFVVLPEVVTHLTSTVLVVEGGPDAA
SFEYALDPIETNTDNDHDDGDDDDDDDDAEEAGSGGVSSGGSSGGGGTAA
SRDSSSGSPSSSSSSSSRTTSGGEGGGGGEEAGVVWQQGDSSGVIHLYDL
EEGRHEIRVRAVDSAGNADPSPATYSWIVDRAGVYGHPSMVTDVVAEGGN
KQAFVQWSAAADDGGGELTKYVVIASTAYADINVEAITSVHATEDVEEGE
GEAGQDEAAGGVAGGGGGVLPTEATVEGLTNGLVYSFQVVAANAFGYSTR
SLPSNKVVTHDPADPCGLVTCGDHGSCFVQRSQSNALRGYCVCHPG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003961FN3_dom
IPR013783Ig-like_fold
IPR036116FN3_sf