prot_Ecto-sp13_S_contig13655.2882.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13655.2882.1
Unique Nameprot_Ecto-sp13_S_contig13655.2882.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length190
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13655.2882.1 vs. uniprot
Match: D8LIH7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIH7_ECTSI)

HSP 1 Score: 281 bits (718), Expect = 3.910e-94
Identity = 157/169 (92.90%), Postives = 159/169 (94.08%), Query Frame = 0 
Query:   21 GSIVDVAREKDEGALRALCQVCSASGEVGEARKACVLVTIYRRESDLFALLLRERRDXXXXXXXXXXXXXXXXXKAASAGLTVLCDMSLDDGVHLEMQSAPLVVKVVNTCGQRIAYLLEFGRAMDLATFQRAFTSARGYFRQMLTLRTLVADSFWQGFASGAGGPAVFF 189
            GSI+ VAREKDEGALRALCQVCSASGEVGEARKACVLVTIYRRESDLFALLLRER D XXXXXXXXXXXX    +A SAGLTVLCDMSLDDGVHLEMQSAPLVVKVVNTCGQRIAYLLEFGRAMDLATFQRAFTSARGYFRQMLTLRTLVADSFWQGFASGAGGPA  F
Sbjct:   18 GSILGVAREKDEGALRALCQVCSASGEVGEARKACVLVTIYRRESDLFALLLRERHDAXXXXXXXXXXXXLGGGEATSAGLTVLCDMSLDDGVHLEMQSAPLVVKVVNTCGQRIAYLLEFGRAMDLATFQRAFTSARGYFRQMLTLRTLVADSFWQGFASGAGGPAAVF 186
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BLAST of mRNA_Ecto-sp13_S_contig13655.2882.1 vs. uniprot
Match: A0A6H5JBN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBN9_9PHAE)

HSP 1 Score: 275 bits (704), Expect = 5.870e-92
Identity = 156/169 (92.31%), Postives = 158/169 (93.49%), Query Frame = 0 
Query:   21 GSIVDVAREKDEGALRALCQVCSASGEVGEARKACVLVTIYRRESDLFALLLRERRDXXXXXXXXXXXXXXXXXKAASAGLTVLCDMSLDDGVHLEMQSAPLVVKVVNTCGQRIAYLLEFGRAMDLATFQRAFTSARGYFRQMLTLRTLVADSFWQGFASGAGGPAVFF 189
            GSI+ VAREKD+GALRALCQVCS SGEVGEARKACVLVTIYRRESDLFALLLRER  XXXXXXXXXXXXX    KAASAGLTVLCDMSLDDGVHLEMQSAPLVVKVVNTCGQRIAYLLEFGRAMDL TFQRAFTSARGYFRQMLTLRTLVADSFWQGFASGAGGPA  F
Sbjct:   19 GSILGVAREKDDGALRALCQVCSTSGEVGEARKACVLVTIYRRESDLFALLLRERXXXXXXXXXXXXXXXRGGGKAASAGLTVLCDMSLDDGVHLEMQSAPLVVKVVNTCGQRIAYLLEFGRAMDLVTFQRAFTSARGYFRQMLTLRTLVADSFWQGFASGAGGPAGVF 187
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13655.2882.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIH7_ECTSI3.910e-9492.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBN9_9PHAE5.870e-9292.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13655contigEcto-sp13_S_contig13655:464..3205 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13655.2882.1mRNA_Ecto-sp13_S_contig13655.2882.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13655 464..3205 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13655.2882.1 ID=prot_Ecto-sp13_S_contig13655.2882.1|Name=mRNA_Ecto-sp13_S_contig13655.2882.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=190bp
MMAAAMQQQQQQQQQQHPPGGSIVDVAREKDEGALRALCQVCSASGEVGE
ARKACVLVTIYRRESDLFALLLRERRDSPSSSSAAAAAAGRGGGKAASAG
LTVLCDMSLDDGVHLEMQSAPLVVKVVNTCGQRIAYLLEFGRAMDLATFQ
RAFTSARGYFRQMLTLRTLVADSFWQGFASGAGGPAVFF*
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