mRNA_Ecto-sp13_S_contig13644.2876.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13644.2876.1
Unique NamemRNA_Ecto-sp13_S_contig13644.2876.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig13644.2876.1 vs. uniprot
Match: D8LDT1_ECTSI (PHB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDT1_ECTSI)

HSP 1 Score: 405 bits (1040), Expect = 2.170e-139
Identity = 214/219 (97.72%), Postives = 217/219 (99.09%), Query Frame = 1
Query:    1 QIYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGSTETPPPTMQQHQMVR 657
            +IYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGY ILQALVTDMDPDPRVKEAMNEINASKR+REAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGSTETPPP MQQH+MVR
Sbjct:  191 KIYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYQILQALVTDMDPDPRVKEAMNEINASKRMREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGSTETPPPNMQQHKMVR 409          
BLAST of mRNA_Ecto-sp13_S_contig13644.2876.1 vs. uniprot
Match: A0A6H5KP74_9PHAE (PHB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP74_9PHAE)

HSP 1 Score: 358 bits (919), Expect = 4.400e-124
Identity = 191/196 (97.45%), Postives = 193/196 (98.47%), Query Frame = 1
Query:   70 VRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGSTETPPPTMQQHQMVR 657
            V  TLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGSTETPPPTM++H MVR
Sbjct:    8 VTGTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGSTETPPPTMKEHTMVR 203          
BLAST of mRNA_Ecto-sp13_S_contig13644.2876.1 vs. uniprot
Match: A0A6H5KBQ9_9PHAE (PHB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBQ9_9PHAE)

HSP 1 Score: 358 bits (920), Expect = 8.140e-122
Identity = 189/204 (92.65%), Postives = 198/204 (97.06%), Query Frame = 1
Query:    1 QIYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGS 612
            +IYDAFYRLTDP+AQIRSYV+DVVRSTLPKLDLDQAFDSKEDIA+AVKNQLEEVM+EYGY ILQALVTDMDPD RVK AMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQ F+E IDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVA++Q+AMRDGFMQG AGS
Sbjct:  150 KIYDAFYRLTDPKAQIRSYVYDVVRSTLPKLDLDQAFDSKEDIAIAVKNQLEEVMQEYGYQILQALVTDMDPDARVKGAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVASLQSAMRDGFMQGHAGS 353          
BLAST of mRNA_Ecto-sp13_S_contig13644.2876.1 vs. uniprot
Match: A0A835YL74_9STRA (Flagellar associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL74_9STRA)

HSP 1 Score: 315 bits (808), Expect = 7.540e-106
Identity = 159/207 (76.81%), Postives = 191/207 (92.27%), Query Frame = 1
Query:    1 QIYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGSTET 621
            ++YDAFYRLTDP++QIRSYV+DV+RST+PKL+LDQAF +KE++A AVK QL  VM+EYGY ILQALVTD++PD RVK+AMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQR+AIV GLRDS+ +F+ +I+GT+PKDVMDLLLLTQYFDMLRD+GQS++++T+FLPHAP+SVA++Q AMRDGFMQ  A   +T
Sbjct:   82 KVYDAFYRLTDPKSQIRSYVYDVIRSTMPKLELDQAFAAKEEVAHAVKEQLTVVMQEYGYQILQALVTDLEPDRRVKDAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRQAIVAGLRDSIHDFSSSIEGTTPKDVMDLLLLTQYFDMLRDIGQSTKSSTIFLPHAPESVASLQGAMRDGFMQAAAAKAQT 288          
BLAST of mRNA_Ecto-sp13_S_contig13644.2876.1 vs. uniprot
Match: A0A7S2BRL8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BRL8_9STRA)

HSP 1 Score: 252 bits (643), Expect = 6.630e-81
Identity = 132/205 (64.39%), Postives = 167/205 (81.46%), Query Frame = 1
Query:    1 QIYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGST 615
            +IYDAFYRL++P  QIR+YVFD+VRS LP + LD+AF++KE +A+ VK  L  VM EYG++I+QALVTD+ PD +VK AMNEINASKR++EAA+ KAEADK++ VKAAEA+AESKYLSGVGV+RQRKAIVDGLRDS++ F+  + GT+PKDV+DLLLLTQYFDML++VG     ATVFLP    S +A   +MRD  +Q QAG +
Sbjct:   82 KIYDAFYRLSNPTQQIRAYVFDIVRSVLPAMPLDEAFEAKEHVALEVKKALSAVMDEYGFVIVQALVTDIAPDAKVKNAMNEINASKRMKEAASEKAEADKVLLVKAAEADAESKYLSGVGVARQRKAIVDGLRDSIKQFSGNVQGTTPKDVIDLLLLTQYFDMLKEVGNHEYTATVFLP----SESANGTSMRDSLLQAQAGQS 282          
BLAST of mRNA_Ecto-sp13_S_contig13644.2876.1 vs. uniprot
Match: A0A7S4IJZ4_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IJZ4_9EUKA)

HSP 1 Score: 251 bits (642), Expect = 1.070e-80
Identity = 123/199 (61.81%), Postives = 172/199 (86.43%), Query Frame = 1
Query:    4 IYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQG 600
            +YDAFYRL +P AQIR+YV DVVR+++PK+DLDQ F+ KEDIA+AVK +L +VM E+G+ I+Q+L+TD+ P  +V  AMN+INA++R R AAT++AEA+KI+ VKAAEA+AESKYLSGVG++RQRKAIV+GL++SV  FA++++GTS KDVMDL+L+TQYFD L+D+G +S+++T+F+PH+P SV ++   +RDGFMQG
Sbjct:   83 VYDAFYRLANPHAQIRAYVNDVVRASVPKIDLDQVFEQKEDIAIAVKEELSKVMGEFGFDIIQSLLTDIRPAAKVMAAMNDINAAQRQRIAATDRAEAEKILVVKAAEADAESKYLSGVGIARQRKAIVEGLQESVTTFADSVEGTSAKDVMDLVLVTQYFDTLKDLGSNSKSSTIFIPHSPGSVGSVAEQVRDGFMQG 281          
BLAST of mRNA_Ecto-sp13_S_contig13644.2876.1 vs. uniprot
Match: W7TM34_9STRA (Hypersensitive-induced response protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TM34_9STRA)

HSP 1 Score: 248 bits (634), Expect = 1.440e-79
Identity = 124/202 (61.39%), Postives = 163/202 (80.69%), Query Frame = 1
Query:    1 QIYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQA 606
            Q YDA+Y+LTDP  QIRSYV D+VRST+PK++LD AF++KE++A A+++ L++ M  YGY I+Q+LV D+  D +VK AMNEINASKRLREAA  KAEADKI+QVKAAEA AESKYL+G+G++R+RKAIVDGLR SV+ F+E ++G +PKDVMDL+LLTQYFDML+DVG +    T+F+ H P +V  ++  +R G MQ  A
Sbjct:   82 QAYDAYYKLTDPNLQIRSYVEDIVRSTVPKMELDMAFEAKEELAHAIRDSLQQTMGTYGYTIIQSLVLDIRVDEKVKTAMNEINASKRLREAAAEKAEADKIVQVKAAEASAESKYLNGMGIARERKAIVDGLRGSVEEFSETVEGATPKDVMDLILLTQYFDMLKDVGNNPTPTTLFMTHGPSAVTELKEQLRAGIMQNAA 283          
BLAST of mRNA_Ecto-sp13_S_contig13644.2876.1 vs. uniprot
Match: A0A6S8S5L6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8S5L6_9STRA)

HSP 1 Score: 246 bits (628), Expect = 1.280e-78
Identity = 128/197 (64.97%), Postives = 164/197 (83.25%), Query Frame = 1
Query:    7 YDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQS-SRAATVFLPHAPQSVAAIQAAMRDGFM 594
            +DAFY+L +P+ QI++YVFDVVRS LPK++LD++F +KE +A  VK+ L+E M  +GY I++ALVTD+ PD RVK +MNEINAS+RLREAA  KAEADKI+QVKAAEA+AESKYLSGVGV+RQR+AIV GL+DS+  F+  I GT+PKDVMDLLLLTQYFDML+DVG S S   T+FLPHAP +V  +Q ++++G M
Sbjct:   85 FDAFYKLANPEIQIQAYVFDVVRSELPKMELDESFSNKEQLANEVKHHLDETMMSFGYSIIKALVTDISPDARVKMSMNEINASRRLREAAKEKAEADKIVQVKAAEADAESKYLSGVGVARQRQAIVGGLQDSIIEFSGEIAGTTPKDVMDLLLLTQYFDMLKDVGSSGSGGKTLFLPHAPSAVGDLQDSLKNGLM 281          
BLAST of mRNA_Ecto-sp13_S_contig13644.2876.1 vs. uniprot
Match: A0A1Z5JUE2_FISSO (PHB domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JUE2_FISSO)

HSP 1 Score: 246 bits (628), Expect = 1.460e-78
Identity = 127/200 (63.50%), Postives = 165/200 (82.50%), Query Frame = 1
Query:    7 YDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQA 606
            YDAFYRLTDP  QI+SYVFDV+RST+PK++LD+AF SK++IA AV  QL+ VMKEYGY IL  LVTD+ PDPRVK +MNEINA++RL+EAA++KAEA KI+QVKAAEAEAE++YLSG+GV+RQRKAIV GL+ SV  F+E ++G +PKDVMD+LLL+QYFD L  VG +S    +FL H P++VA+++ ++R  F+   A
Sbjct:   91 YDAFYRLTDPHGQIQSYVFDVIRSTVPKMELDEAFSSKDEIANAVLRQLQHVMKEYGYEILNTLVTDLSPDPRVKASMNEINANRRLKEAASHKAEAKKIVQVKAAEAEAEARYLSGLGVARQRKAIVSGLQSSVAAFSEEVEGATPKDVMDILLLSQYFDTLSSVGANS----LFLEHDPETVASMRVSVRQSFLTSDA 286          
BLAST of mRNA_Ecto-sp13_S_contig13644.2876.1 vs. uniprot
Match: A0A022PZB3_ERYGU (PHB domain-containing protein n=4 Tax=Lamiales TaxID=4143 RepID=A0A022PZB3_ERYGU)

HSP 1 Score: 243 bits (621), Expect = 1.520e-77
Identity = 120/202 (59.41%), Postives = 164/202 (81.19%), Query Frame = 1
Query:   10 DAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGST 615
            DAFY+L++ + QI++YVFDV+R+T+PKLDLD  F+ K DIA AV+N+LE+ M  YG+ I+Q L+ D++PD +VK AMNEINA+ RLR AAT KAEA+KI+Q+K AE EAESKYLSG+G++RQR+AIVDGLRDSV  F+E + GTS KDVMD++L+TQYFD ++++G SS+++ VF+PH P +V  I   +R+G +QG A ST
Sbjct:   85 DAFYKLSNTKEQIQAYVFDVIRATVPKLDLDSTFEQKNDIAKAVENELEKAMSAYGFEIVQTLIVDIEPDAQVKRAMNEINAAARLRVAATEKAEAEKILQIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSVIAFSENVPGTSAKDVMDMVLVTQYFDTMKEIGASSKSSAVFIPHGPGAVKDIATQIREGLLQGSAAST 286          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13644.2876.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDT1_ECTSI2.170e-13997.72PHB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KP74_9PHAE4.400e-12497.45PHB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KBQ9_9PHAE8.140e-12292.65PHB domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YL74_9STRA7.540e-10676.81Flagellar associated protein n=1 Tax=Tribonema min... [more]
A0A7S2BRL8_9STRA6.630e-8164.39Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S4IJZ4_9EUKA1.070e-8061.81Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
W7TM34_9STRA1.440e-7961.39Hypersensitive-induced response protein n=1 Tax=Na... [more]
A0A6S8S5L6_9STRA1.280e-7864.97Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A1Z5JUE2_FISSO1.460e-7863.50PHB domain-containing protein n=2 Tax=Fistulifera ... [more]
A0A022PZB3_ERYGU1.520e-7759.41PHB domain-containing protein n=4 Tax=Lamiales Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13644contigEcto-sp13_S_contig13644:214..3079 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score408.3
Seed ortholog evalue2.3e-111
Seed eggNOG ortholog2880.D8LDT1
Preferred nameHIR1
Model size660
KEGG koko:K03129
KEGG Pathwayko03022,ko05016,ko05168,map03022,map05016,map05168
Hectar predicted targeting categoryother localisation
GOsGO:0002239,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005773,GO:0005774,GO:0005794,GO:0005886,GO:0005911,GO:0008150,GO:0009506,GO:0009507,GO:0009536,GO:0009605,GO:0009607,GO:0012505,GO:0016020,GO:0019899,GO:0019900,GO:0019901,GO:0030054,GO:0031090,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043424,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0051704,GO:0051707,GO:0055044,GO:0071944,GO:0098588,GO:0098805
Exons6
EggNOG free text desc.stress-induced mitochondrial fusion
EggNOG OGsCOG0330@1,KOG2620@2759
Cds size660
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03021,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13644.2876.1prot_Ecto-sp13_S_contig13644.2876.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13644 214..3079 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462728.2906182-CDS-Ecto-sp13_S_contig13644:213..2891681462728.2906182-CDS-Ecto-sp13_S_contig13644:213..289Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13644 214..289 +
1681462728.3023-CDS-Ecto-sp13_S_contig13644:792..8391681462728.3023-CDS-Ecto-sp13_S_contig13644:792..839Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13644 793..839 +
1681462728.311016-CDS-Ecto-sp13_S_contig13644:1202..13911681462728.311016-CDS-Ecto-sp13_S_contig13644:1202..1391Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13644 1203..1391 +
1681462728.3264625-CDS-Ecto-sp13_S_contig13644:2052..21761681462728.3264625-CDS-Ecto-sp13_S_contig13644:2052..2176Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13644 2053..2176 +
1681462728.3403265-CDS-Ecto-sp13_S_contig13644:2539..27001681462728.3403265-CDS-Ecto-sp13_S_contig13644:2539..2700Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13644 2540..2700 +
1681462728.354771-CDS-Ecto-sp13_S_contig13644:3016..30791681462728.354771-CDS-Ecto-sp13_S_contig13644:3016..3079Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13644 3017..3079 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13644.2876.1

>prot_Ecto-sp13_S_contig13644.2876.1 ID=prot_Ecto-sp13_S_contig13644.2876.1|Name=mRNA_Ecto-sp13_S_contig13644.2876.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=220bp
QIYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQ
LEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRLREAATNKAEAD
KIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPK
DVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQG
QAGSTETPPPTMQQHQMVR*
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mRNA from alignment at Ecto-sp13_S_contig13644:214..3079+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13644.2876.1 ID=mRNA_Ecto-sp13_S_contig13644.2876.1|Name=mRNA_Ecto-sp13_S_contig13644.2876.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2866bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13644:214..3079+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGATATACGACGCATTCTATCGACTCACGGACCCTCAGGCGCAGATCCG CTCTTATGTCTTCGACGTCGTCAGAAGTGAGTTGGGTTGTTACATACCAC ATAGTTCCCTTTCCTTCAAGAACTGTACATGGCGAGTGACGATAGGATAC TACTGAACTTTGTGTCTTGCCGGACACGACGCGATGCGGGCTATGAAAAA GTATTGTTCGGTGCGTGGGCCTGCGATGTGCAGCGGGGCGTCAGAGTAAT GCCAGTCCATGCTGCTATTGGAGGAGAGGAAGAACGTTTCTTCATCCAGT CAGTCAGGTTGTCGGCGTTTGTTTTCGTTGAACGCTATTACTTCGGTTCT GGCACCAGCTCATGCTACATGCGTTTCCCGCGCGCTATCTCCGTCTGCCG TCCACCAAGTGGTTCATTCCGTGCATCTGCCCTTTACATACCTGTGGTTT ACTTCTCGTAGTATACGTTCTGTGGCTGTCTCTCCTTGGGTGACATGCCT CGATCCTGCGTCATCAGTGCCGCCGATAGACGTGGACATGAACTAACCTC GATGTCGGTTGTGTTGTGGCGTGTGACAGGTACACTTCCCAAGCTCGATC TTGACCAGGCTTTCGACTCGAAAGAGGTATGTCCATGCCGATGTGTTTCG ATGCGCGGTCTATGGTTATTTTCGTTGTTATTGTTTTGGTTGGTAGAATC AAGATGTCGCAATACTGTAGGCCGTCAAACACATGTTCAATTTTCGTTTG TAATAATATAAAGCATGTAGAGGAAACTTCACATACATGCACGCCCTCGT TGGCCGAATCGTTCGACCATCTTTCGAAACTTACAGAAATGACCTACCTT TGCTGTTGGGAATACCCGGGCTAAGTTTCTTTCTCTCGTTCGCGTTACAT CTATTTTAGTGGGCCGTAGTCGCGTTCCACACCTGAAGAGGCGTTGTTCG TCATTTTCTCGACCATGCGTTGTTCGCATCTAAAAACAGGACATCGCCGT TGCGGTGAAGAACCAGCTGGAGGAGGTGATGAAGGAGTACGGGTACATGA TCCTGCAGGCCCTGGTGACCGACATGGACCCGGACCCCCGCGTGAAGGAA GCCATGAACGAGATCAACGCCTCCAAGCGGCTGAGAGAGGCGGCCACCAA CAAGGCTGAGGCCGACAAGATCATGCAGGTAAACGGTGTGTTCGTGTCTT TTAATGGTTGTCTGGAGCTAGGAACATTTGGTGAACCCATCCCCCGGTGT GAGTTGCCTCGACCCTGGTTGCCTGGTTGTTTTGGTGTGCCCCGCTAAAT CGTTTGTGGATGCGAAAGTTCAAGACCACAAAAGCATGAATGTTTACGCA CCCCTTCGCTCAGTACCTTGTCCCCCCCCCTCCGTCCCCCCCTCTGCAGC TATTGTCCCTCCCACCCCCTCTCCCCCTGGTGAATCTCAAATATCGCTGT CTTTTGTGTGTCGAGGGTTTCCCTGCACACACCATCGACACACACCCGGT CTTACCTAGTACCCGGAGAAATTTATTTTCATCAAGTCTTCCCGTCTTCA CTCCACTCTCTTGAAGCGCTTCCTTCTGAAGTAGTAAATAACGATGCTTT GGGTGATACTGTTTCGGTACGCCAACCGTGCAGTCGGTGACGTTGACGGT AACGGGATAAATTTCACCATACGGTAATACCGCCAACGACAAACGTACCG GCAAATGATGGCGGTTGATGCCATGAGCATATATATGTCGAACATACTGA CTGGTGTTATTGTACGGAGGCCCTGATTGCGTGTCGATTTTGTCGAAAAT GTTACGATTCGTTCCTGGCTTCATCGTTGGGCAATGCAGGTCAAGGCGGC AGAGGCAGAAGCAGAGTCCAAGTACCTGTCCGGCGTAGGTGTGTCCAGGC AGCGCAAGGCTATCGTCGACGGCCTCCGCGATTCCGTGCAGAACTTCGCC GAAGCCATCGACGGTGCGAAAAGCAGGGGGGGAGCGCCAGCGATGCGCAC GAGCCCGCCTCAATCTCAGCGCATTCGTTTCTCTTCTACGCCTCCCGAGA AACCGCCACGCACATGATTCGAAGTCGAAAAGGATACGTTCAAATTGTTG TTGTCTGAATCAAACGGAGAGCAGTGACGAATGGTCATCTTCGCCCGAAC CTTCAACCGTCTGTGAATGATGATGCAGGTTCCACTTTTCGGAAACCAAC CTACAATAACCTACGACGACTCCCTCCCTGATATCCGCACCAGAGGAAAT ACCCCCAGGCGCACAACATCTCATGGTTTTGTGTTGTTGTCTTGATTTGG TGCAAATTGTCGTCGCCTTGCTGCAGGAACATCCCCGAAGGACGTGATGG ATCTGCTTCTCCTGACTCAATATTTCGATATGCTCCGCGACGTGGGTCAA TCTTCCCGCGCGGCGACGGTGTTCCTGCCGCACGCGCCGCAGTCCGTGGC AGCCATCCAAGCCGCCATGCGCGACGGGTTTATGCAGGTAAAGAACGTCA AGAAATAAAATCCGAAGCAATCTTCATCTGAGACGGTGTTGGCTAATTTC CATCGCGTTTGAGTCGCCGCCGCCATAAGTGTGTGTGTTCGTGTTCGCCT CCTTTGCGCTACACCCCCCCTGCCCCCACCGCCACCATCCACGTGTATTT CGTGTACGTTGCAAATTTAAGCCTTTTGGTGCTTTGTCGTGCCTTTTCAA AACCCTAATCGTTTGACCCCTTGCCCTTATTTATCTGCTTGCTTACTTGG ACGGCCATTCGTTTGGGCTTCTCTCTTCCCCTGCCGTGCGACGGTGCCTA CAGGGACAGGCGGGGAGCACCGAGACTCCCCCGCCAACCATGCAACAGCA TCAGATGGTGCGCTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13644:214..3079+

>mRNA_Ecto-sp13_S_contig13644.2876.1 ID=mRNA_Ecto-sp13_S_contig13644.2876.1|Name=mRNA_Ecto-sp13_S_contig13644.2876.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=660bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13644:214..3079+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGATATACGACGCATTCTATCGACTCACGGACCCTCAGGCGCAGATCCG
CTCTTATGTCTTCGACGTCGTCAGAAGTACACTTCCCAAGCTCGATCTTG
ACCAGGCTTTCGACTCGAAAGAGGACATCGCCGTTGCGGTGAAGAACCAG
CTGGAGGAGGTGATGAAGGAGTACGGGTACATGATCCTGCAGGCCCTGGT
GACCGACATGGACCCGGACCCCCGCGTGAAGGAAGCCATGAACGAGATCA
ACGCCTCCAAGCGGCTGAGAGAGGCGGCCACCAACAAGGCTGAGGCCGAC
AAGATCATGCAGGTCAAGGCGGCAGAGGCAGAAGCAGAGTCCAAGTACCT
GTCCGGCGTAGGTGTGTCCAGGCAGCGCAAGGCTATCGTCGACGGCCTCC
GCGATTCCGTGCAGAACTTCGCCGAAGCCATCGACGGAACATCCCCGAAG
GACGTGATGGATCTGCTTCTCCTGACTCAATATTTCGATATGCTCCGCGA
CGTGGGTCAATCTTCCCGCGCGGCGACGGTGTTCCTGCCGCACGCGCCGC
AGTCCGTGGCAGCCATCCAAGCCGCCATGCGCGACGGGTTTATGCAGGGA
CAGGCGGGGAGCACCGAGACTCCCCCGCCAACCATGCAACAGCATCAGAT
GGTGCGCTGA
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