mRNA_Ecto-sp13_S_contig13644.2876.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13644.2876.1 vs. uniprot
Match: D8LDT1_ECTSI (PHB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDT1_ECTSI) HSP 1 Score: 405 bits (1040), Expect = 2.170e-139 Identity = 214/219 (97.72%), Postives = 217/219 (99.09%), Query Frame = 1
Query: 1 QIYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGSTETPPPTMQQHQMVR 657
+IYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGY ILQALVTDMDPDPRVKEAMNEINASKR+REAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGSTETPPP MQQH+MVR
Sbjct: 191 KIYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYQILQALVTDMDPDPRVKEAMNEINASKRMREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGSTETPPPNMQQHKMVR 409
BLAST of mRNA_Ecto-sp13_S_contig13644.2876.1 vs. uniprot
Match: A0A6H5KP74_9PHAE (PHB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP74_9PHAE) HSP 1 Score: 358 bits (919), Expect = 4.400e-124 Identity = 191/196 (97.45%), Postives = 193/196 (98.47%), Query Frame = 1
Query: 70 VRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGSTETPPPTMQQHQMVR 657
V TLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGSTETPPPTM++H MVR
Sbjct: 8 VTGTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGSTETPPPTMKEHTMVR 203
BLAST of mRNA_Ecto-sp13_S_contig13644.2876.1 vs. uniprot
Match: A0A6H5KBQ9_9PHAE (PHB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBQ9_9PHAE) HSP 1 Score: 358 bits (920), Expect = 8.140e-122 Identity = 189/204 (92.65%), Postives = 198/204 (97.06%), Query Frame = 1
Query: 1 QIYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGS 612
+IYDAFYRLTDP+AQIRSYV+DVVRSTLPKLDLDQAFDSKEDIA+AVKNQLEEVM+EYGY ILQALVTDMDPD RVK AMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQ F+E IDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVA++Q+AMRDGFMQG AGS
Sbjct: 150 KIYDAFYRLTDPKAQIRSYVYDVVRSTLPKLDLDQAFDSKEDIAIAVKNQLEEVMQEYGYQILQALVTDMDPDARVKGAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQTFSETIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVASLQSAMRDGFMQGHAGS 353
BLAST of mRNA_Ecto-sp13_S_contig13644.2876.1 vs. uniprot
Match: A0A835YL74_9STRA (Flagellar associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL74_9STRA) HSP 1 Score: 315 bits (808), Expect = 7.540e-106 Identity = 159/207 (76.81%), Postives = 191/207 (92.27%), Query Frame = 1
Query: 1 QIYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGSTET 621
++YDAFYRLTDP++QIRSYV+DV+RST+PKL+LDQAF +KE++A AVK QL VM+EYGY ILQALVTD++PD RVK+AMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQR+AIV GLRDS+ +F+ +I+GT+PKDVMDLLLLTQYFDMLRD+GQS++++T+FLPHAP+SVA++Q AMRDGFMQ A +T
Sbjct: 82 KVYDAFYRLTDPKSQIRSYVYDVIRSTMPKLELDQAFAAKEEVAHAVKEQLTVVMQEYGYQILQALVTDLEPDRRVKDAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRQAIVAGLRDSIHDFSSSIEGTTPKDVMDLLLLTQYFDMLRDIGQSTKSSTIFLPHAPESVASLQGAMRDGFMQAAAAKAQT 288
BLAST of mRNA_Ecto-sp13_S_contig13644.2876.1 vs. uniprot
Match: A0A7S2BRL8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BRL8_9STRA) HSP 1 Score: 252 bits (643), Expect = 6.630e-81 Identity = 132/205 (64.39%), Postives = 167/205 (81.46%), Query Frame = 1
Query: 1 QIYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGST 615
+IYDAFYRL++P QIR+YVFD+VRS LP + LD+AF++KE +A+ VK L VM EYG++I+QALVTD+ PD +VK AMNEINASKR++EAA+ KAEADK++ VKAAEA+AESKYLSGVGV+RQRKAIVDGLRDS++ F+ + GT+PKDV+DLLLLTQYFDML++VG ATVFLP S +A +MRD +Q QAG +
Sbjct: 82 KIYDAFYRLSNPTQQIRAYVFDIVRSVLPAMPLDEAFEAKEHVALEVKKALSAVMDEYGFVIVQALVTDIAPDAKVKNAMNEINASKRMKEAASEKAEADKVLLVKAAEADAESKYLSGVGVARQRKAIVDGLRDSIKQFSGNVQGTTPKDVIDLLLLTQYFDMLKEVGNHEYTATVFLP----SESANGTSMRDSLLQAQAGQS 282
BLAST of mRNA_Ecto-sp13_S_contig13644.2876.1 vs. uniprot
Match: A0A7S4IJZ4_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IJZ4_9EUKA) HSP 1 Score: 251 bits (642), Expect = 1.070e-80 Identity = 123/199 (61.81%), Postives = 172/199 (86.43%), Query Frame = 1
Query: 4 IYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQG 600
+YDAFYRL +P AQIR+YV DVVR+++PK+DLDQ F+ KEDIA+AVK +L +VM E+G+ I+Q+L+TD+ P +V AMN+INA++R R AAT++AEA+KI+ VKAAEA+AESKYLSGVG++RQRKAIV+GL++SV FA++++GTS KDVMDL+L+TQYFD L+D+G +S+++T+F+PH+P SV ++ +RDGFMQG
Sbjct: 83 VYDAFYRLANPHAQIRAYVNDVVRASVPKIDLDQVFEQKEDIAIAVKEELSKVMGEFGFDIIQSLLTDIRPAAKVMAAMNDINAAQRQRIAATDRAEAEKILVVKAAEADAESKYLSGVGIARQRKAIVEGLQESVTTFADSVEGTSAKDVMDLVLVTQYFDTLKDLGSNSKSSTIFIPHSPGSVGSVAEQVRDGFMQG 281
BLAST of mRNA_Ecto-sp13_S_contig13644.2876.1 vs. uniprot
Match: W7TM34_9STRA (Hypersensitive-induced response protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TM34_9STRA) HSP 1 Score: 248 bits (634), Expect = 1.440e-79 Identity = 124/202 (61.39%), Postives = 163/202 (80.69%), Query Frame = 1
Query: 1 QIYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQA 606
Q YDA+Y+LTDP QIRSYV D+VRST+PK++LD AF++KE++A A+++ L++ M YGY I+Q+LV D+ D +VK AMNEINASKRLREAA KAEADKI+QVKAAEA AESKYL+G+G++R+RKAIVDGLR SV+ F+E ++G +PKDVMDL+LLTQYFDML+DVG + T+F+ H P +V ++ +R G MQ A
Sbjct: 82 QAYDAYYKLTDPNLQIRSYVEDIVRSTVPKMELDMAFEAKEELAHAIRDSLQQTMGTYGYTIIQSLVLDIRVDEKVKTAMNEINASKRLREAAAEKAEADKIVQVKAAEASAESKYLNGMGIARERKAIVDGLRGSVEEFSETVEGATPKDVMDLILLTQYFDMLKDVGNNPTPTTLFMTHGPSAVTELKEQLRAGIMQNAA 283
BLAST of mRNA_Ecto-sp13_S_contig13644.2876.1 vs. uniprot
Match: A0A6S8S5L6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8S5L6_9STRA) HSP 1 Score: 246 bits (628), Expect = 1.280e-78 Identity = 128/197 (64.97%), Postives = 164/197 (83.25%), Query Frame = 1
Query: 7 YDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQS-SRAATVFLPHAPQSVAAIQAAMRDGFM 594
+DAFY+L +P+ QI++YVFDVVRS LPK++LD++F +KE +A VK+ L+E M +GY I++ALVTD+ PD RVK +MNEINAS+RLREAA KAEADKI+QVKAAEA+AESKYLSGVGV+RQR+AIV GL+DS+ F+ I GT+PKDVMDLLLLTQYFDML+DVG S S T+FLPHAP +V +Q ++++G M
Sbjct: 85 FDAFYKLANPEIQIQAYVFDVVRSELPKMELDESFSNKEQLANEVKHHLDETMMSFGYSIIKALVTDISPDARVKMSMNEINASRRLREAAKEKAEADKIVQVKAAEADAESKYLSGVGVARQRQAIVGGLQDSIIEFSGEIAGTTPKDVMDLLLLTQYFDMLKDVGSSGSGGKTLFLPHAPSAVGDLQDSLKNGLM 281
BLAST of mRNA_Ecto-sp13_S_contig13644.2876.1 vs. uniprot
Match: A0A1Z5JUE2_FISSO (PHB domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JUE2_FISSO) HSP 1 Score: 246 bits (628), Expect = 1.460e-78 Identity = 127/200 (63.50%), Postives = 165/200 (82.50%), Query Frame = 1
Query: 7 YDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQA 606
YDAFYRLTDP QI+SYVFDV+RST+PK++LD+AF SK++IA AV QL+ VMKEYGY IL LVTD+ PDPRVK +MNEINA++RL+EAA++KAEA KI+QVKAAEAEAE++YLSG+GV+RQRKAIV GL+ SV F+E ++G +PKDVMD+LLL+QYFD L VG +S +FL H P++VA+++ ++R F+ A
Sbjct: 91 YDAFYRLTDPHGQIQSYVFDVIRSTVPKMELDEAFSSKDEIANAVLRQLQHVMKEYGYEILNTLVTDLSPDPRVKASMNEINANRRLKEAASHKAEAKKIVQVKAAEAEAEARYLSGLGVARQRKAIVSGLQSSVAAFSEEVEGATPKDVMDILLLSQYFDTLSSVGANS----LFLEHDPETVASMRVSVRQSFLTSDA 286
BLAST of mRNA_Ecto-sp13_S_contig13644.2876.1 vs. uniprot
Match: A0A022PZB3_ERYGU (PHB domain-containing protein n=4 Tax=Lamiales TaxID=4143 RepID=A0A022PZB3_ERYGU) HSP 1 Score: 243 bits (621), Expect = 1.520e-77 Identity = 120/202 (59.41%), Postives = 164/202 (81.19%), Query Frame = 1
Query: 10 DAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQLEEVMKEYGYMILQALVTDMDPDPRVKEAMNEINASKRLREAATNKAEADKIMQVKAAEAEAESKYLSGVGVSRQRKAIVDGLRDSVQNFAEAIDGTSPKDVMDLLLLTQYFDMLRDVGQSSRAATVFLPHAPQSVAAIQAAMRDGFMQGQAGST 615
DAFY+L++ + QI++YVFDV+R+T+PKLDLD F+ K DIA AV+N+LE+ M YG+ I+Q L+ D++PD +VK AMNEINA+ RLR AAT KAEA+KI+Q+K AE EAESKYLSG+G++RQR+AIVDGLRDSV F+E + GTS KDVMD++L+TQYFD ++++G SS+++ VF+PH P +V I +R+G +QG A ST
Sbjct: 85 DAFYKLSNTKEQIQAYVFDVIRATVPKLDLDSTFEQKNDIAKAVENELEKAMSAYGFEIVQTLIVDIEPDAQVKRAMNEINAAARLRVAATEKAEAEKILQIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSVIAFSENVPGTSAKDVMDMVLVTQYFDTMKEIGASSKSSAVFIPHGPGAVKDIATQIREGLLQGSAAST 286 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13644.2876.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13644.2876.1 >prot_Ecto-sp13_S_contig13644.2876.1 ID=prot_Ecto-sp13_S_contig13644.2876.1|Name=mRNA_Ecto-sp13_S_contig13644.2876.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=220bp QIYDAFYRLTDPQAQIRSYVFDVVRSTLPKLDLDQAFDSKEDIAVAVKNQback to top mRNA from alignment at Ecto-sp13_S_contig13644:214..3079+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13644.2876.1 ID=mRNA_Ecto-sp13_S_contig13644.2876.1|Name=mRNA_Ecto-sp13_S_contig13644.2876.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2866bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13644:214..3079+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13644:214..3079+ >mRNA_Ecto-sp13_S_contig13644.2876.1 ID=mRNA_Ecto-sp13_S_contig13644.2876.1|Name=mRNA_Ecto-sp13_S_contig13644.2876.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=660bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13644:214..3079+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |