prot_Ecto-sp13_S_contig1028.287.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1028.287.1
Unique Name	prot_Ecto-sp13_S_contig1028.287.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	483

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1028.287.1 vs. uniprot
Match: A0A6H5JAH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAH0_9PHAE)

HSP 1 Score: 655 bits (1689), Expect = 1.770e-232
Identity = 438/482 (90.87%), Postives = 446/482 (92.53%), Query Frame = 0

Query:    1 MQWSKRATPATPASASKPSSAGKRERWWRVLESAKWELGSEPRHQQTGARLRPGRWLLSAWRKTADQFRSNMRWGSLSYIARAWEEQSTTTDICSAAEGSAKADSSTCSNNNEAIHGPENAGGTNATNSATVASFLRRRAPRGLAFALVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTRDVAERADDTRPGLAKRSGEDADGEHAVGGESVGGKEEEMDGRMDVGEEGTRKGTSERDEPGPTACPSPEHDREGNDGGKATHAIVRTDGRQQGDVSSDRTIQGGGQPGHSAEEQDSAIARMSRGQSLLSESSTEDILAEADHLIADAANNTFNSIRATTTPTKPRAEKLRATSKATGPTQAARRKSKDSPRGTSSLKLTPTRMTSASRSSDTRSPKRPRVYPEVSGEEVDALVSLTQRALERDPSALSEIAKDASLQQGRDK 482
            MQWSKRATPAT ASASKPSSAGKRE W RVLESAKWELGSEPR QQTG RLR GRWLLSAWRKTA QFRSNMRWGSLSYIARAWEEQSTTTDICSAA+G AKADSSTCSNNNEAI GPENAGGT+ATN A VASFLRRRAP+GLAFALVVA      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  DTRDVAERA+DTRPGLAKRS ED DGEHAVGG+SVGGKEEEMDGRMDVGEEGTRKGTSE DEPGPTACPSPEHDREGND GK THA VRTDG+QQ DVSSD  IQGGGQP HSAEEQDSA+ARMSRGQSLLSESSTEDILAEADHLIADAANNTFNSIRA TTPTKPRA KLRATSKATGP QAARRKSKDSPRGT SLKLT +RMTSASRSSDTRSPKRPRVYPEVSGEEVDALVSLT RALERDPSALSEIAKDASLQQG DK
Sbjct:    1 MQWSKRATPATTASASKPSSAGKREGWSRVLESAKWELGSEPRDQQTGTRLRSGRWLLSAWRKTAHQFRSNMRWGSLSYIARAWEEQSTTTDICSAADGRAKADSSTCSNNNEAIQGPENAGGTDATNPAVVASFLRRRAPQGLAFALVVATVYVVYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--DTRDVAERANDTRPGLAKRSDEDVDGEHAVGGKSVGGKEEEMDGRMDVGEEGTRKGTSEHDEPGPTACPSPEHDREGNDVGKVTHAGVRTDGQQQDDVSSDGAIQGGGQPSHSAEEQDSALARMSRGQSLLSESSTEDILAEADHLIADAANNTFNSIRAMTTPTKPRAGKLRATSKATGPIQAARRKSKDSPRGTPSLKLTLSRMTSASRSSDTRSPKRPRVYPEVSGEEVDALVSLTHRALERDPSALSEIAKDASLQQGGDK 480

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BLAST of mRNA_Ecto-sp13_S_contig1028.287.1 vs. uniprot
Match: D8LIF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIF2_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 1.760e-24
Identity = 58/60 (96.67%), Postives = 58/60 (96.67%), Query Frame = 0

Query:  423 MTSASRSSDTRSPKRPRVYPEVSGEEVDALVSLTQRALERDPSALSEIAKDASLQQGRDK 482
            MTS SRSSDTRSPKRPRVYPEVSGEEVDALVSLTQRALERDPSALSEIAKDASLQQG DK
Sbjct:    1 MTSVSRSSDTRSPKRPRVYPEVSGEEVDALVSLTQRALERDPSALSEIAKDASLQQGGDK 60

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1028.287.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1028.287.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JAH0_9PHAE	1.770e-232	90.87	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LIF2_ECTSI	1.760e-24	96.67	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 158..482
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 140..157
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..139
None	No IPR available	TMHMM	TMhelix		coord: 140..157

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1028	contig	Ecto-sp13_S_contig1028:1351..4910 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1028.287.1	mRNA_Ecto-sp13_S_contig1028.287.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1028 138..5228 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1028.287.1 ID=prot_Ecto-sp13_S_contig1028.287.1|Name=mRNA_Ecto-sp13_S_contig1028.287.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=483bp
MQWSKRATPATPASASKPSSAGKRERWWRVLESAKWELGSEPRHQQTGAR
LRPGRWLLSAWRKTADQFRSNMRWGSLSYIARAWEEQSTTTDICSAAEGS
AKADSSTCSNNNEAIHGPENAGGTNATNSATVASFLRRRAPRGLAFALVV
AAVYVVYRRRRRRPGGRPRSRRQLGERRSDVAAAAARQWWWQRAGGNGQE
AERKDDGGGSSSDGGGGDTRDVAERADDTRPGLAKRSGEDADGEHAVGGE
SVGGKEEEMDGRMDVGEEGTRKGTSERDEPGPTACPSPEHDREGNDGGKA
THAIVRTDGRQQGDVSSDRTIQGGGQPGHSAEEQDSAIARMSRGQSLLSE
SSTEDILAEADHLIADAANNTFNSIRATTTPTKPRAEKLRATSKATGPTQ
AARRKSKDSPRGTSSLKLTPTRMTSASRSSDTRSPKRPRVYPEVSGEEVD
ALVSLTQRALERDPSALSEIAKDASLQQGRDK*