mRNA_Ecto-sp13_S_contig1363.2868.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1363.2868.1 vs. uniprot
Match: A0A6H5KJT5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT5_9PHAE) HSP 1 Score: 370 bits (950), Expect = 1.270e-127 Identity = 184/196 (93.88%), Postives = 190/196 (96.94%), Query Frame = 1
Query: 1 MESLRCRLLALFAIAFASSAGFVVPPTCHSKRVRGHMMMASDQQEGYVSWLTQKVERARRPPFVKIARARLQRDFAVLLMRSSYQVVDELDFVPMDDFQKQFFLLRQGEWLGYKENFPRIKQGDLADPDYFDFISFAQYASVAEAMRNGRDFFEEKVGAEGEKRTVQRSADFKDNARLPEEHARRVGDRILVSASE 588
MESLRCRLLALFA+AFASSAGF+VPPTCHSKR RGH+MMASDQQEGYVSWLTQK+ERARRPPFVKIARARLQRDFAVLLMR+SYQVVDELDFVPMDDFQKQFFL RQ EWLGYKENFPRIKQGDLADPDYFDFISFAQYASVAEAMRNGRDFFEEKVGAEGEKRTVQRSADFKDNARLPEEHARRVGDRIL +E
Sbjct: 1 MESLRCRLLALFALAFASSAGFMVPPTCHSKRGRGHVMMASDQQEGYVSWLTQKIERARRPPFVKIARARLQRDFAVLLMRASYQVVDELDFVPMDDFQKQFFLFRQREWLGYKENFPRIKQGDLADPDYFDFISFAQYASVAEAMRNGRDFFEEKVGAEGEKRTVQRSADFKDNARLPEEHARRVGDRILAYCTE 196
BLAST of mRNA_Ecto-sp13_S_contig1363.2868.1 vs. uniprot
Match: D8LI96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI96_ECTSI) HSP 1 Score: 223 bits (568), Expect = 1.190e-70 Identity = 108/111 (97.30%), Postives = 110/111 (99.10%), Query Frame = 1
Query: 139 YVSWLTQKVERARRPPFVKIARARLQRDFAVLLMRSSYQVVDELDFVPMDDFQKQFFLLRQGEWLGYKENFPRIKQGDLADPDYFDFISFAQYASVAEAMRNGRDFFEEKV 471
YVSWLTQK+ERARRPPFVKIARARLQRDFAVLLMRSSYQVVDELDFVPMDDFQKQFFLLRQGEWLGYK+NFPRIKQGDLADPDYFDFISFAQYASVAEAMRNGRDFFEEK
Sbjct: 7 YVSWLTQKIERARRPPFVKIARARLQRDFAVLLMRSSYQVVDELDFVPMDDFQKQFFLLRQGEWLGYKQNFPRIKQGDLADPDYFDFISFAQYASVAEAMRNGRDFFEEKA 117
BLAST of mRNA_Ecto-sp13_S_contig1363.2868.1 vs. uniprot
Match: A0A836CM91_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM91_9STRA) HSP 1 Score: 193 bits (491), Expect = 1.020e-57 Identity = 95/155 (61.29%), Postives = 118/155 (76.13%), Query Frame = 1
Query: 124 DQQEGYVSWLTQKVERARRPPFVKIARARLQRDFAVLLMRSSYQVVDELDFVPMDDFQKQFFLLRQGEWLGYKENFPRIKQGDLADPDYFDFISFAQYASVAEAMRNGRDFFEEKVGAEGEKRTVQRSADFKDNARLPEEHARRVGDRILVSASE 588
D + Y+SW+ +K+E +RRPP V I RAR+QRDFAVLLMRSSY V DELD+ PMD FQ++FFL RQGEW +++ P I QGDL DP+YFDFISFAQYA++A MR+ + F EKVGA+GE +TVQR+ + D+A LP EHARRVGDRI E
Sbjct: 64 DDGQSYLSWVGRKLELSRRPPPVMIPRARIQRDFAVLLMRSSYAVADELDYTPMDGFQREFFLFRQGEWQDFQKQHPGILQGDLTDPNYFDFISFAQYATIAAGMRSAQLLFTEKVGADGETQTVQRAPELADDALLPGEHARRVGDRIFTYIME 218
BLAST of mRNA_Ecto-sp13_S_contig1363.2868.1 vs. uniprot
Match: A0A7S2V3L1_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3L1_9STRA) HSP 1 Score: 166 bits (419), Expect = 4.800e-47 Identity = 87/150 (58.00%), Postives = 107/150 (71.33%), Query Frame = 1
Query: 127 QQEGYVSWLTQKVERARRPPFVKIARARLQRDFAVLLMRSSYQVVDELDFVPMDDFQKQFFLLRQGEWLGYKENFPRIKQGDLADPDYFDFISFAQYASVAEAMRNGR-DFFEEKVGAEGEKRTVQRSADFKDNARLPEEHARRVGDRIL 573
Q+E Y SWL+QK+ER RP +K+ R R+ RDFAVLLMRSSY V DE+DF+PMD+FQKQFFL R E+ Y E + QGDLADP YFDFISFAQYA+++ M+N F EK GAEGE +QR ++ DN LP HA+ VGDR+L
Sbjct: 57 QEEDYFSWLSQKIERKSRPKAIKLPRLRIDRDFAVLLMRSSYAVADEMDFIPMDEFQKQFFLYRADEYELYLEENRGVTQGDLADPVYFDFISFAQYATLSRFMKNPPGQVFVEKRGAEGEDFVIQRPQEYADNKVLPIVHAQLVGDRML 206
BLAST of mRNA_Ecto-sp13_S_contig1363.2868.1 vs. uniprot
Match: A0A4D9D7Y6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7Y6_9STRA) HSP 1 Score: 157 bits (398), Expect = 4.770e-44 Identity = 88/163 (53.99%), Postives = 109/163 (66.87%), Query Frame = 1
Query: 106 HMMMASDQQEG--YVSWLTQKVERARRPPFVKIARARLQRDFAVLLMRSSYQVVDELDFVPMDDFQKQFFLLRQGEWLGYKENFP--RIKQGDLADPDYFDFISFAQYASVAEAMRNGRDFFEEKVGAEGEKRTVQRSADF---KDNARLPEEHARRVGDRIL 573
H S ++ G Y WL ++ E RP + R +++RD AVLLMRSSY+V DELDFVPM+DFQK FF RQ EW Y FP ++QG+L P YFDFISFAQY ++ E MR+G+ F E V AEGEKR V+RS D +DN+ LP EH+RRVGDRIL
Sbjct: 13 HCTALSAERSGPTYFEWLGRQAELKLRPQPYQGLRLKIERDLAVLLMRSSYEVADELDFVPMNDFQKDFFTFRQAEWEDYVGAFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGKLAFVELVSAEGEKRVVRRSDDPSLPQDNSLLPAEHSRRVGDRIL 175
BLAST of mRNA_Ecto-sp13_S_contig1363.2868.1 vs. uniprot
Match: K8YVS2_NANGC (Uncharacterized protein (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YVS2_NANGC) HSP 1 Score: 158 bits (399), Expect = 3.850e-43 Identity = 92/176 (52.27%), Postives = 115/176 (65.34%), Query Frame = 1
Query: 76 PTCHSK-RVRG--HMMMASDQQEG--YVSWLTQKVERARRPPFVKIARARLQRDFAVLLMRSSYQVVDELDFVPMDDFQKQFFLLRQGEWLGYKENFP--RIKQGDLADPDYFDFISFAQYASVAEAMRNGRDFFEEKVGAEGEKRTVQRSADF---KDNARLPEEHARRVGDRIL 573
P HS +RG H + ++ G Y WL ++ E RP + R +++RD AVLLMRSSY+V DELDFVPM+DFQK FF RQ EW Y FP ++QG+L P YFDFISFAQY ++ E MR+G+ F E V AEGEKR V+RS D +DN+ LP EH+RRVGDRIL
Sbjct: 108 PMIHSPFSIRGDYHCTALNAERSGPTYFEWLGRQAELKLRPQPYQGLRLKIERDLAVLLMRSSYEVADELDFVPMNDFQKDFFTFRQAEWEDYVGAFPPLSVRQGELTQPSYFDFISFAQYCTLNEEMRHGKLAFVELVSAEGEKRVVRRSDDPSLPQDNSLLPAEHSRRVGDRIL 283
BLAST of mRNA_Ecto-sp13_S_contig1363.2868.1 vs. uniprot
Match: A0A6U4J7M3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4J7M3_9STRA) HSP 1 Score: 154 bits (390), Expect = 5.820e-43 Identity = 80/138 (57.97%), Postives = 101/138 (73.19%), Query Frame = 1
Query: 163 VERARRPPFVKIARARLQRDFAVLLMRSSYQVVDELDFVPMDDFQKQFFLLRQGEWLGYKENFPR-IKQGDLADPDYFDFISFAQYASVAEAMRNGRDFFEEKVGAEGEKRTVQRSADFKDNARLPEEHARRVGDRIL 573
+E R P V AR L + FAV LMR+SY+V DELDFV MD+FQK+F+L RQ EWL YK+ R + QGDLA+PDYFD+ISF QYA + ++MR+GR F EK+GAEGE+RTV+R+ +DN LP EH RRVG +L
Sbjct: 29 LESIRPVPPVATARTALDQKFAVQLMRTSYEVADELDFVAMDEFQKRFYLFRQDEWLSYKDRVQRFMTQGDLANPDYFDYISFCQYAVIGDSMRSGRLEFIEKIGAEGEQRTVRRAEGLRDNNLLPREHERRVGALLL 166
BLAST of mRNA_Ecto-sp13_S_contig1363.2868.1 vs. uniprot
Match: A0A0G4F5D5_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F5D5_VITBC) HSP 1 Score: 153 bits (386), Expect = 5.520e-42 Identity = 81/143 (56.64%), Postives = 98/143 (68.53%), Query Frame = 1
Query: 151 LTQKVERARRPPFVKIARARLQRDFAVLLMRSSYQVVDELDFVPMDDFQKQFFLLRQGEWLGYKENFPR--IKQGDLADPDYFDFISFAQYASVAEAMRNGRDFFEEKVGAEGEKRTVQRSADFKDNARLPEEHARRVGDRIL 573
L Q + R P VKI R R+ +DFAV +MR SY V DELDFVPM+DFQK FFL RQ EW Y+E I QGDLAD +YFDFISFAQY ++ M +G+ F EK GA GE++ V+R A DN+ LP EH+RRVGDR+L
Sbjct: 54 LKQAADELRSPAPVKIPRTRINQDFAVQMMRQSYNVADELDFVPMNDFQKDFFLYRQNEWERYRERLKPMPITQGDLADANYFDFISFAQYLTLYTEMCSGQQLFVEKTGATGEEQLVRRPAFLADNSLLPSEHSRRVGDRLL 196
BLAST of mRNA_Ecto-sp13_S_contig1363.2868.1 vs. uniprot
Match: A0A6S9X2M1_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A6S9X2M1_CHRCT) HSP 1 Score: 150 bits (379), Expect = 6.780e-42 Identity = 75/149 (50.34%), Postives = 99/149 (66.44%), Query Frame = 1
Query: 142 VSWLTQKVERARRPPFVKIARARLQRDFAVLLMRSSYQVVDELDFVPMDDFQKQFFLLRQGEWLGYKENFPRIKQGDLADPDYFDFISFAQYASVAEAMRNGRDFFEEKVGAEGEKRTVQRSADFKDNARLPEEHARRVGDRILVSASE 588
+S + + +ER RP + R R+ DFAVLLMR+SYQV D+LDF PM+DFQ+ FFLLRQ EW Y+E P KQGDL+DP YFDFISF QYA+++ +MR+GR F E + A G + R+ DN LP +RVGD IL + ++
Sbjct: 31 ISGIGETIERRLRPVPKNLPRRRMDLDFAVLLMRTSYQVADDLDFTPMNDFQRDFFLLRQDEWDVYREMMPSTKQGDLSDPSYFDFISFCQYATISNSMRSGRTLFNELIDANGTAVVISRNPAIADNKELPALQLQRVGDSILNALAD 179
BLAST of mRNA_Ecto-sp13_S_contig1363.2868.1 vs. uniprot
Match: A0A8J5X5N7_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X5N7_DIALT) HSP 1 Score: 148 bits (374), Expect = 1.110e-40 Identity = 83/140 (59.29%), Postives = 98/140 (70.00%), Query Frame = 1
Query: 178 RPPFVKIARARLQRDFAVLLMRSSYQVVDELDFVPMDDFQKQFFLLRQGEWLGYKENFPRI--KQGDLADPDYFDFISFAQYASVAEAMRNGRDFFEEKVGAEGEKRTVQRSADF-KDNARLPEEHARRVGDRILVSASE 588
RP IAR+R+ +DFAVLLMRSSY +E+ FVPMD+FQ+ FFL RQ EW Y + KQGDL DP YFDFISFAQY+++AE MRNGR + E VGAEGE+ +R AD +DNA LP EH RRVGD I ASE
Sbjct: 33 RPKPPAIARSRIDQDFAVLLMRSSYTAAEEMRFVPMDEFQRAFFLNRQDEWQPYLAAVEGLVPKQGDLQDPSYFDFISFAQYSTLAEEMRNGRLAYRELVGAEGEQVVRERPADVPRDNAALPAEHRRRVGDVIFSWASE 172 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1363.2868.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1363.2868.1 >prot_Ecto-sp13_S_contig1363.2868.1 ID=prot_Ecto-sp13_S_contig1363.2868.1|Name=mRNA_Ecto-sp13_S_contig1363.2868.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=196bp MESLRCRLLALFAIAFASSAGFVVPPTCHSKRVRGHMMMASDQQEGYVSWback to top mRNA from alignment at Ecto-sp13_S_contig1363:14370..17472+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1363.2868.1 ID=mRNA_Ecto-sp13_S_contig1363.2868.1|Name=mRNA_Ecto-sp13_S_contig1363.2868.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3103bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1363:14370..17472+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1363:14370..17472+ >mRNA_Ecto-sp13_S_contig1363.2868.1 ID=mRNA_Ecto-sp13_S_contig1363.2868.1|Name=mRNA_Ecto-sp13_S_contig1363.2868.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=588bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1363:14370..17472+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |