mRNA_Ecto-sp13_S_contig13623.2862.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13623.2862.1 vs. uniprot
Match: A0A6H5KLW9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLW9_9PHAE) HSP 1 Score: 514 bits (1324), Expect = 4.470e-183 Identity = 256/265 (96.60%), Postives = 258/265 (97.36%), Query Frame = 1
Query: 1 MMESGTMAGASSDFNEDWEDWDPSQGNFLHHMVAGSIAGITEHTVMYPVDTFKTYVQCMRECPEAVAGRRVMELVRGQGMLRLWRGVGTMFTGCVPAHALYFSVLEYCKDRLGVNQPGHQPAGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAANESLKRVMRPAGDYDTKTFLLAGSGAGAVAAVATTPLDVVKTRLQTQAFRGAAAPLAARSEGFAAPKEGAA 795
M ESGTMAGASSDFNEDWEDWDPSQGNFLHHMVAGSIAGITEHTVMYPVDTFKTYVQCMRECPEAVAGRRVME+VRGQGMLRLWRGVGTMFTGCVPAHALYFSVLE CKDRLGVNQPGHQPAGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVA NESLKRVMRPAGDYD KTFLLAGSGAGA+AAVAT PLDVVKTRLQTQAFRG AAP AARSEGFAAPKEGAA
Sbjct: 1 MAESGTMAGASSDFNEDWEDWDPSQGNFLHHMVAGSIAGITEHTVMYPVDTFKTYVQCMRECPEAVAGRRVMEMVRGQGMLRLWRGVGTMFTGCVPAHALYFSVLENCKDRLGVNQPGHQPAGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAVNESLKRVMRPAGDYDAKTFLLAGSGAGAIAAVATNPLDVVKTRLQTQAFRGVAAPQAARSEGFAAPKEGAA 265
BLAST of mRNA_Ecto-sp13_S_contig13623.2862.1 vs. uniprot
Match: A0A835YZ17_9STRA (Mitoferrin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ17_9STRA) HSP 1 Score: 377 bits (968), Expect = 1.010e-127 Identity = 206/309 (66.67%), Postives = 227/309 (73.46%), Query Frame = 1
Query: 49 DWEDWDPSQGNFLHHMVAGSIAGITEHTVMYPVDTFKTYVQCMRECPEAVAGRRVMELVRGQGMLRLWRGVGTMFTGCVPAHALYFSVLEYCKDRLGVNQPGHQPAGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAANESLKRVMRPAGDYDTKTFLLAGSGAGAVAAVATTPLDVVKTRLQTQAF-----RGAAAPLAARSEGFA--------APKEGAAGTG-----------LHS-AAARCATGRCGADKPVVALQYQGLVDAVR 900
DWEDW +GNF+HHM+AGSIAGITEHTVM+PVDT KT++QCMRECPE AG RV+E+VRGQGMLRLWRGVGTMF GCVPAHA YFSVLE K R G N GH+P AA AG ATVFHDA MTPMDV+KQRLQLGY++G+ DCV TI RTEG +A YRSFPTTLFMNIPYG VMVAANESLK +RP GD+ T TF+ AG GAGAVAA ATTPLDVVKTRLQTQA R AAP A G ++G AG G HS AA RCA G CG +KP V LQY+GLVDAVR
Sbjct: 13 DWEDWS-GEGNFVHHMLAGSIAGITEHTVMFPVDTIKTHIQCMRECPERQAGARVLEMVRGQGMLRLWRGVGTMFMGCVPAHAAYFSVLEASKSRFGANAGGHKPVAAAAAGGLATVFHDAFMTPMDVIKQRLQLGYYRGIGDCVRTIVRTEGARALYRSFPTTLFMNIPYGAVMVAANESLKTALRPRGDHTTATFMAAGCGAGAVAAAATTPLDVVKTRLQTQALLTAAGRAHAAPAAHSGNGLGKLPVLLGRGLRQGGAGAGGGAVAAAMPAVFHSNAAGRCAKG-CG-EKPEVPLQYRGLVDAVR 318
BLAST of mRNA_Ecto-sp13_S_contig13623.2862.1 vs. uniprot
Match: A0A835Z185_9STRA (Mitoferrin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z185_9STRA) HSP 1 Score: 367 bits (943), Expect = 6.750e-124 Identity = 201/319 (63.01%), Postives = 224/319 (70.22%), Query Frame = 1
Query: 49 DWEDWDPSQGNFLHHMVAGSIAGITEHTVMYPVDTFKTYVQCMRECPEAVAGRRVMELVRGQGMLRLWRGVGTMFTGCVPAHALYFSVLEYCKDRLGVNQPGHQPAGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAANESLKRVMRPAGDYDTKTFLLAGSGAGAVAAVATTPLDVVKTRLQTQAFRGAAAPLAARSEGFAAPKEGA---------AGTGLHS--------------------------AAARCATGRCGADKPVVALQYQGLVDAVR 900
DWEDW +GNF+HHM+AGSIAG+TEHTVM+PVDT KT++QCMRECPE AG RV+E+VRGQGMLRLWRGVGTMF GCVPAHA YFS+LE CK+R G N GH P AA AG ATVFHDAVMTPMDV+KQRLQLGY++G+ DCV TI R EG A YRSFPTTLFMNIPYG +MVAANESLK +RP GD+ T T++LAG GAGAVAA ATTPLDVVKT LQTQA A AA + AAP A AGT L S AAARC G CG +KP V LQY+G VDA R
Sbjct: 13 DWEDWS-GEGNFVHHMLAGSIAGVTEHTVMFPVDTLKTHIQCMRECPERQAGSRVLEMVRGQGMLRLWRGVGTMFVGCVPAHAAYFSILELCKERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYRGIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPRGDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQAIHAHATRYAAAA---AAPHVAAPAXXXXPIFAGTALASSGLLRRACAAPAGATVALMPAVFHSNAAARCIQG-CG-EKPEVKLQYRGFVDAAR 325
BLAST of mRNA_Ecto-sp13_S_contig13623.2862.1 vs. uniprot
Match: D7G8Z1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Z1_ECTSI) HSP 1 Score: 358 bits (920), Expect = 4.030e-122 Identity = 185/192 (96.35%), Postives = 186/192 (96.88%), Query Frame = 1
Query: 325 KDRLGVNQPGHQPAGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAANESLKRVMRPAGDYDTKTFLLAGSGAGAVAAVATTPLDVVKTRLQTQAFRGAAAPLAARSEGFAAPKEGAAGTGLHSAAARCATGRCGADKPVVALQYQGLVDAVR 900
+DRLGVNQPGHQP GAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVA NESLK VMRPAGDYDTKTFLLAGSGAGAVAAVAT PLDVVKTRLQTQAFRGAAAPLAARSEGFAAPKEGA GTGLHSAAARCATGRCGADKPVV LQYQGLVDAVR
Sbjct: 13 QDRLGVNQPGHQPTGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAVNESLKHVMRPAGDYDTKTFLLAGSGAGAVAAVATNPLDVVKTRLQTQAFRGAAAPLAARSEGFAAPKEGATGTGLHSAAARCATGRCGADKPVVTLQYQGLVDAVR 204
BLAST of mRNA_Ecto-sp13_S_contig13623.2862.1 vs. uniprot
Match: A0A7S3Y5E3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5E3_HETAK) HSP 1 Score: 304 bits (779), Expect = 8.200e-100 Identity = 147/238 (61.76%), Postives = 176/238 (73.95%), Query Frame = 1
Query: 49 DWEDWDPSQGNFLHHMVAGSIAGITEHTVMYPVDTFKTYVQCMR---ECPEAVAGRR--VMELVRGQGMLRLWRGVGTMFTGCVPAHALYFSVLEYCKDRLGVNQPGHQPAGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAANESLKRVMRPAGDYDTKTFLLAGSGAGAVAAVATTPLDVVKTRLQTQAFRGAAAP 747
+WEDWDP +G+F HMVAGS AG+ EH MYP+DT KT+VQC + EC R ++ ++ QGMLRLWRGV TM GC+PAHA YFSV+E CK+ GVN+PGH P AA GA A+VFHD +MTP+DVVKQRLQLGY++G+ DC T+ RTEG QAF+ S P TL MNIPYGC+MVA NESLKRV+RP GDYD T + AG+GAGA A++ TTPLDVVKTRLQ Q AP
Sbjct: 11 EWEDWDPEKGSFAVHMVAGSCAGVVEHCSMYPIDTLKTHVQCHKPRQECSSRFICRSFSAIDFIQKQGMLRLWRGVNTMILGCIPAHAAYFSVVELCKESFGVNRPGHHPLAAAATGAIASVFHDGIMTPLDVVKQRLQLGYYRGIRDCARTVYRTEGAQAFFVSLPITLAMNIPYGCIMVATNESLKRVLRPGGDYDLGTHMAAGTGAGAAASLVTTPLDVVKTRLQKQRVEPGQAP 248
BLAST of mRNA_Ecto-sp13_S_contig13623.2862.1 vs. uniprot
Match: A0A7S3Y5R4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5R4_HETAK) HSP 1 Score: 305 bits (781), Expect = 9.550e-100 Identity = 150/238 (63.03%), Postives = 179/238 (75.21%), Query Frame = 1
Query: 49 DWEDWDPSQGNFLHHMVAGSIAGITEHTVMYPVDTFKTYVQCMR---ECPEAVAGRR--VMELVRGQGMLRLWRGVGTMFTGCVPAHALYFSVLEYCKDRLGVNQPGHQPAGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAANESLKRVMRPAGDYDTKTFLLAGSGAGAVAAVATTPLDVVKTRLQTQ-AFRGAAA 744
+WEDWDP +G+F HMVAGS AG+ EH MYP+DT KT+VQC + EC R ++ ++ QGMLRLWRGV TM GC+PAHA YFSV+E CK+ GVN+PGH P AA GA A+VFHD +MTP+DVVKQRLQLGY++G+ DC T+ RTEG QAF+ S P TL MNIPYGC+MVA NESLKRV+RP GDYD T + AG+GAGA A++ TTPLDVVKTRLQ Q A GAAA
Sbjct: 11 EWEDWDPEKGSFAVHMVAGSCAGVVEHCSMYPIDTLKTHVQCHKPRQECSSRFICRSFSAIDFIQKQGMLRLWRGVNTMILGCIPAHAAYFSVVELCKESFGVNRPGHHPLAAAATGAIASVFHDGIMTPLDVVKQRLQLGYYRGIRDCARTVYRTEGAQAFFVSLPITLAMNIPYGCIMVATNESLKRVLRPGGDYDLGTHMAAGTGAGAAASLVTTPLDVVKTRLQVQRATAGAAA 248
BLAST of mRNA_Ecto-sp13_S_contig13623.2862.1 vs. uniprot
Match: W7U8D3_9STRA (Mitoferrin-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U8D3_9STRA) HSP 1 Score: 301 bits (771), Expect = 1.270e-96 Identity = 155/268 (57.84%), Postives = 186/268 (69.40%), Query Frame = 1
Query: 37 DFNEDWEDWDPSQGNFLHHMVAGSIAGITEHTVMYPVDTFKTYVQCMRECP---------------EAVAGRR------------------------VMELVRGQGMLRLWRGVGTMFTGCVPAHALYFSVLEYCKDRLGVNQPGHQPAGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAANESLKRVMRPAGDYDTKTFLLAGSGAGAVAAVATTPLDVVKTRLQTQ 723
D + DWEDWDP G+F+HHM+AGSIAGI EHT+MYPVDT KT++QC +EC AV+GR LV+ +G LRLWRGV TM + CVPAHA YFS LE CK+R GVN H GAA AGA AT+FHD++MTPMDV+KQRLQLGY+KG+ C ++I R EG +AFY S P TLFMN+PYG VMVAANES+KR+++PAGDY T T+LLAGSGAGA+AA ATTPLD++KTRLQTQ
Sbjct: 27 DADLDWEDWDPKTGSFVHHMIAGSIAGIAEHTLMYPVDTIKTFMQC-QECSLTANCLKQRTVVAAAAAVSGREGLGEAAARGASVVEGSVGLTSFEAAFRLVQKEGTLRLWRGVSTMLSACVPAHAAYFSALESCKERFGVNGREHNVMGAAAAGAVATLFHDSIMTPMDVIKQRLQLGYYKGLAHCAVSIVRQEGVRAFYLSLPVTLFMNLPYGGVMVAANESIKRLLKPAGDYTTGTYLLAGSGAGALAAAATTPLDLIKTRLQTQ 293
BLAST of mRNA_Ecto-sp13_S_contig13623.2862.1 vs. uniprot
Match: A0A7S2RU47_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RU47_9STRA) HSP 1 Score: 262 bits (670), Expect = 1.650e-84 Identity = 130/227 (57.27%), Postives = 158/227 (69.60%), Query Frame = 1
Query: 46 EDWEDWDPSQGN-FLHHMVAGSIAGITEHTVMYPVDTFKTYVQCMRECPEAVAGRRVMELVRGQGMLRLWRGVGTMFTGCVPAHALYFSVLEYCKDRLGVNQPGHQPAGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAANESLKRVMRPAGDYDTKTFLLAGSGAGAVAAVATTPLDVVKTRLQTQ 723
E+WE+WDP G F H +AGS AG EH ++P DT KT++Q E + + LVR +GM RLWRGV TMFT CVPAHA YFS+ E K G N+ GH P AA +GA AT+ HD++MTPMDVVKQRLQLG++ GM DC +I RTEG AF+ SFPTTLFMNIPY +MVA+NES K+V+ P +Y+ F ++G AGAVAA T PLDVVKTRLQTQ
Sbjct: 9 EEWEEWDPESGTTFFVHAMAGSCAGAAEHCAIFPFDTIKTHMQA-----EGASSSSIRSLVRQEGMFRLWRGVSTMFTACVPAHAAYFSLFEQSKIYFGANEEGHHPVAAAASGAIATIAHDSIMTPMDVVKQRLQLGFYNGMSDCFWSIVRTEGAGAFFLSFPTTLFMNIPYAGIMVASNESFKKVLNPTNEYNLPVFFISGGMAGAVAAAFTNPLDVVKTRLQTQ 230
BLAST of mRNA_Ecto-sp13_S_contig13623.2862.1 vs. uniprot
Match: K3X9N6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X9N6_GLOUD) HSP 1 Score: 254 bits (648), Expect = 2.180e-79 Identity = 138/301 (45.85%), Postives = 183/301 (60.80%), Query Frame = 1
Query: 43 NEDWEDWDPSQGNFLHHMVAGSIAGITEHTVMYPVDTFKTYVQCMRECP------EAVAGRRVMELVRGQGMLRLWRGVGTMFTGCVPAHALYFSVLEYCKDRLGVNQPGHQPAGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAANESLKRVMRPAGDYDTKTFLLAGSGAGAVAAVATTPLDVVKTRLQTQAF----------RGAAAPLAARSEGFAAPKEGAAGTGLHSAAARCATGRCGADKPVVALQYQGLVDAV 897
+EDWE+W P +G+FLHHM+AGS AG+ EH ++P+DT KT++QC R CP + A +L+ +G LRL+RGV TM + +PAHA+YFSV E K LG + H P + AG ATV HD +MTPMDV+KQRLQLGY+ G+ DC TI R EG +A Y SFPTT FMN+PY +MV+ANE+ K+++ P+G+ + + +G+ AGA+A V T PLDV KTRLQTQ R + L R P T H AA G +P + LQY+GL DA+
Sbjct: 21 DEDWEEWTPEKGSFLHHMLAGSAAGVAEHVSIFPIDTIKTHMQCQR-CPVNGKPLKLSATHTARKLIAEEGPLRLFRGVSTMLSASLPAHAVYFSVFESMKKTLGADSAEHTPIASGAAGVVATVCHDMIMTPMDVIKQRLQLGYYSGVTDCFKTIVRQEGLRALYISFPTTFFMNLPYSMIMVSANETFKKILNPSGEMNISAYFASGAMAGALAGVLTNPLDVAKTRLQTQMLLVQEDPSCPSRARCSQLQTRGVALTVPTSC---TIKHPVAATKTIG----GEPKMRLQYRGLFDAL 313
BLAST of mRNA_Ecto-sp13_S_contig13623.2862.1 vs. uniprot
Match: A0A7S2V5B9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5B9_9STRA) HSP 1 Score: 247 bits (631), Expect = 8.670e-78 Identity = 126/239 (52.72%), Postives = 165/239 (69.04%), Query Frame = 1
Query: 49 DWEDWDPSQGNFLHHMVAGSIAGITEHTVMYPVDTFKTYVQCMR---ECPEAVAGRRVMELVRGQGMLRLWRGVGTMFTGCVPAHALYFSVLEYCKDRLGVNQP----GHQPA--GAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHK---GMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAANESLKRVMRPAGDYDTKTFLLAGSGAGAVAAVATTPLDVVKTRLQTQAF 729
+WEDW+P+ G+F+ HM+AGS+AG+ EH ++P+DT KT++QC R +C E A V L + +G+LRLWRGV TM G +PAHA YFSV+E CK++ GVN G A GA +AG ATVFHD +MTPMDV+KQR+QLG G+L C I EG AF+RS PTTL MN+PYGC+ +A+NE++KR++RP GDYD +T ++AG+ TPLDVVKTRLQTQ F
Sbjct: 9 EWEDWNPANGSFISHMLAGSVAGVVEHISLFPLDTVKTHIQCHRAKADCMEC-AHTSVWRLCQREGLLRLWRGVSTMLFGSIPAHASYFSVIEICKEKFGVNDTHSGQGEWVAAVGAGMAGGIATVFHDGIMTPMDVIKQRMQLGLGGKGGGILKCAAHIASHEGLGAFFRSLPTTLVMNVPYGCITLASNETIKRILRPDGDYDLRTHMVAGAXXXXXXXXXXTPLDVVKTRLQTQNF 246 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13623.2862.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13623.2862.1 >prot_Ecto-sp13_S_contig13623.2862.1 ID=prot_Ecto-sp13_S_contig13623.2862.1|Name=mRNA_Ecto-sp13_S_contig13623.2862.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=300bp MMESGTMAGASSDFNEDWEDWDPSQGNFLHHMVAGSIAGITEHTVMYPVDback to top mRNA from alignment at Ecto-sp13_S_contig13623:422..4565+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13623.2862.1 ID=mRNA_Ecto-sp13_S_contig13623.2862.1|Name=mRNA_Ecto-sp13_S_contig13623.2862.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4144bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13623:422..4565+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13623:422..4565+ >mRNA_Ecto-sp13_S_contig13623.2862.1 ID=mRNA_Ecto-sp13_S_contig13623.2862.1|Name=mRNA_Ecto-sp13_S_contig13623.2862.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=900bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13623:422..4565+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |