prot_Ecto-sp13_S_contig13618.2860.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13618.2860.1
Unique Nameprot_Ecto-sp13_S_contig13618.2860.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length290
Homology
BLAST of mRNA_Ecto-sp13_S_contig13618.2860.1 vs. uniprot
Match: D7FMF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF7_ECTSI)

HSP 1 Score: 550 bits (1418), Expect = 2.420e-190
Identity = 285/289 (98.62%), Postives = 288/289 (99.65%), Query Frame = 0
Query:    1 MLQPVRPGHQGGDNKCVRFTLVAAPRVKNVAYIKLASLNVEEFDLRLDEGMVRWAQGLADRVMWTLVADRRADEMDKWPLPQEAFCSSQAGHPGGGKASGENADGSSVGGGQGSTGMLVSRGGGEGAFASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLITG 289
            +LQPVRPG+QGGDNKCVRFTLVAAPRVKNVAYIKLASLNVEEFDLRLDEGMVRWAQGLADRVMWTLVADRRADEMDKWPLPQEAFCSSQAGHPGGGKASGEN DGSSVGGGQGSTGM+VSRGGGEGAFASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLITG
Sbjct:  153 LLQPVRPGYQGGDNKCVRFTLVAAPRVKNVAYIKLASLNVEEFDLRLDEGMVRWAQGLADRVMWTLVADRRADEMDKWPLPQEAFCSSQAGHPGGGKASGENIDGSSVGGGQGSTGMVVSRGGGEGAFASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLITG 441          
BLAST of mRNA_Ecto-sp13_S_contig13618.2860.1 vs. uniprot
Match: A0A6H5KXT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXT8_9PHAE)

HSP 1 Score: 540 bits (1390), Expect = 8.320e-182
Identity = 279/289 (96.54%), Postives = 285/289 (98.62%), Query Frame = 0
Query:    1 MLQPVRPGHQGGDNKCVRFTLVAAPRVKNVAYIKLASLNVEEFDLRLDEGMVRWAQGLADRVMWTLVADRRADEMDKWPLPQEAFCSSQAGHPGGGKASGENADGSSVGGGQGSTGMLVSRGGGEGAFASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLITG 289
            +LQPVRPG+QGG+NKCVRFTLVAAPRVKNVAYIKLASLNVEEFDLRLDEGMVRWAQGLADRVMWTLVADRRADEMDKWPLP+EAFCSSQAGHPGGGK SGENADG SVGGGQG+T M+VSRGG EGAFASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLITG
Sbjct:  506 LLQPVRPGYQGGNNKCVRFTLVAAPRVKNVAYIKLASLNVEEFDLRLDEGMVRWAQGLADRVMWTLVADRRADEMDKWPLPREAFCSSQAGHPGGGKPSGENADGGSVGGGQGTTAMVVSRGGSEGAFASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLITG 794          
BLAST of mRNA_Ecto-sp13_S_contig13618.2860.1 vs. uniprot
Match: A0A836C849_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C849_9STRA)

HSP 1 Score: 181 bits (458), Expect = 1.190e-47
Identity = 124/334 (37.13%), Postives = 158/334 (47.31%), Query Frame = 0
Query:    1 MLQPVRPGHQGGDN-----KCVRFTLVAAPRVKNVAYIKLASLNVEEFDLRLDEGMVRWAQGLADRVMWTLVADRRA--------------DEMDK--WPLPQEAFCSSQAGHPGGGKASGENADGSSVGGGQGSTGMLVSRGGGEGAFASRYVYLEVFQ----------------------VSSVKVRLSLQRAKDSFDNVY--VGVKPGQMLLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLITG 289
            +LQPV     GG        C R  +  AP V N+ Y K  SL +   +LRL+E +V WAQ  AD+V   L  +                 DE     W LP     + Q                              +  G      +RYVY  +                        +++ +VRLSLQR     + V     +   QM+LD MMRMDSAHI L S I+HN T    +L   A  HY   +KQ   LMLG+LEAFGNPVGL RG+ QG+QDF+ EPVLGL++SVE+L PEE   G+ARG GSLL H+VGG+ANS S+I G
Sbjct: 5129 LLQPVERCDDGGGGGKGGQHCARLMVRVAPHVANIVYCKALSLKLSPLELRLEESIVLWAQRFADKVRRYLQTEAAXXXXXXXXXXXXXXXDEASDAAWELPHTVLGAPQMPQQ-----------------------AAAAAPGASSPLWARYVYFHILATXXXXXXXXXXXXXXXXXXXXXIAAFQVRLSLQRPTQGAEEVRRAPALTVTQMVLDAMMRMDSAHINLASFIMHNETIATQQLGAIAAAHYLSTVKQHVLLMLGALEAFGNPVGLFRGVSQGVQDFISEPVLGLVRSVEELRPEEFFAGIARGGGSLLKHTVGGMANSASMIAG 5439          
BLAST of mRNA_Ecto-sp13_S_contig13618.2860.1 vs. uniprot
Match: A0A7S2F4H5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F4H5_9STRA)

HSP 1 Score: 110 bits (274), Expect = 5.170e-25
Identity = 61/157 (38.85%), Postives = 88/157 (56.05%), Query Frame = 0
Query:  132 YVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLIT 288
            + Y+E   V +++ R+S+ R ++S  +VYVG KP ++LLD++ R+DSA   L+ L+V +       L      HY   ++Q     +GSLEA GNPVGLVRG  QG  D V EP+ GL+++VE                    H+VGGVANS + IT
Sbjct:   71 WTYVEELVVDTIRARVSVSRPRESAADVYVGFKPARLLLDVLQRIDSARFSLEPLMVRHRLIGPGELPAVVVRHYTSSVRQHLLSTVGSLEALGNPVGLVRGFMQGASDAVAEPLEGLVRTVETAXXXXXXXXXXXXXXXXXTHTVGGVANSAAQIT 227          
BLAST of mRNA_Ecto-sp13_S_contig13618.2860.1 vs. uniprot
Match: A0A7S1XZQ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZQ2_9STRA)

HSP 1 Score: 112 bits (279), Expect = 5.190e-25
Identity = 65/171 (38.01%), Postives = 96/171 (56.14%), Query Frame = 0
Query:  124 GEGAFASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKP------GQMLLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLIT 288
            G G  A+   Y E+ Q+  V+   S + +K    +                L+D++ RM+ A I+LK  +V +       L++   +HYERE+++    M+G+L   GNPVGL+R + +G +DFV EP+ GLL SVE   P  L+ GM +G  SLL +SVGGVANS SL+T
Sbjct:    7 GGGGAAAGLKYFELLQIDRVRFWASFKNSKSGAADAAAATAAQPKSTLASTLMDIVGRMEEARIRLKPFVVKDFFGVADGLSVQLYQHYEREIRRHFLEMIGALHLLGNPVGLMRSLREGAKDFVAEPMHGLLASVEQAKPAHLVKGMRKGTTSLLRNSVGGVANSASLLT 177          
BLAST of mRNA_Ecto-sp13_S_contig13618.2860.1 vs. uniprot
Match: A0A7R9WT54_9STRA (Hypothetical protein (Fragment) n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WT54_9STRA)

HSP 1 Score: 102 bits (255), Expect = 9.260e-24
Identity = 54/110 (49.09%), Postives = 72/110 (65.45%), Query Frame = 0
Query:  179 AHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLIT 288
            A +    + + N  +T  +L+     HY   L+Q    +LGSL AFGNP+GL+RG+G+GM DFV EPV GL KSV++L P  L  G+ARG GSL  H+VGG A+S SL+T
Sbjct:    1 ASLNFAGISLRNHISTTPQLSTYLLTHYMASLRQNVPALLGSLAAFGNPLGLIRGVGEGMADFVSEPVKGLQKSVQELDPGYLFDGVARGTGSLARHTVGGFADSASLLT 110          
BLAST of mRNA_Ecto-sp13_S_contig13618.2860.1 vs. uniprot
Match: A0A7S2LN01_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LN01_9STRA)

HSP 1 Score: 105 bits (261), Expect = 1.200e-21
Identity = 52/120 (43.33%), Postives = 78/120 (65.00%), Query Frame = 0
Query:  169 LLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLIT 288
            ++D ++R + A +    + + N  T   ++T     HY   L+     +LGSL AFGNP+GL+RG+G G+ DFV EP+ GL KS+E+L P  ++ G+ARG GSL  H++GGVA+S SL+T
Sbjct:  281 IVDALLRCEEASLAFPGIGIRNYLTNSPQVTTYLLAHYLAALRSNVPSLLGSLAAFGNPLGLIRGLGDGVSDFVSEPIKGLKKSLEELDPTFVIDGVARGTGSLARHTIGGVADSASLLT 400          
BLAST of mRNA_Ecto-sp13_S_contig13618.2860.1 vs. uniprot
Match: A0A7S2PQX2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PQX2_9STRA)

HSP 1 Score: 105 bits (261), Expect = 1.340e-21
Identity = 52/120 (43.33%), Postives = 78/120 (65.00%), Query Frame = 0
Query:  169 LLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLIT 288
            ++D ++R + A +    + + N  T   ++T     HY   L+     +LGSL AFGNP+GL+RG+G G+ DFV EP+ GL KS+E+L P  ++ G+ARG GSL  H++GGVA+S SL+T
Sbjct:  492 IVDALLRCEEASLAFPGIGIRNYLTNSPQVTTYLLAHYLAALRSNVPSLLGSLAAFGNPLGLIRGLGDGVSDFVSEPIKGLKKSLEELDPTFVIDGVARGTGSLARHTIGGVADSASLLT 611          
BLAST of mRNA_Ecto-sp13_S_contig13618.2860.1 vs. uniprot
Match: A0A7R9UE31_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE31_9STRA)

HSP 1 Score: 103 bits (257), Expect = 4.810e-21
Identity = 60/158 (37.97%), Postives = 89/158 (56.33%), Query Frame = 0
Query:  134 YLEVFQVSSVKVRLSLQRAK-DSFDNVYVGVKPG--QMLLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLIT 288
            Y E+ Q   +++ +S +    D        V P     L+D++ R+D A I+LK L+V +       L+    +HYERE ++    ++G+L   GNP+GL+R    G +DFV EP+LGL+ S+E   P  L+ G  RG  SLL +SVGGV NS SL+T
Sbjct:  700 YFELLQADRLRMSVSYKNTSADRLRRTSRKVIPALTSALIDMVGRLDGARIRLKPLVVKDFFGPLDFLSEQVSQHYEREARRHVLELIGALHLLGNPIGLMRSFRDGAKDFVAEPMLGLMDSIEQAKPAALVKGFKRGTTSLLKNSVGGVVNSASLLT 857          
BLAST of mRNA_Ecto-sp13_S_contig13618.2860.1 vs. uniprot
Match: A0A7R9ZE76_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZE76_9STRA)

HSP 1 Score: 101 bits (252), Expect = 1.510e-20
Identity = 53/120 (44.17%), Postives = 76/120 (63.33%), Query Frame = 0
Query:  169 LLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLIT 288
            L+D +++ D A +    + + N  +T  +L      HY   L+     +LGSL  FGNPVGL+RG+G G+ DFV EP+ GL +SVE+L P  +M G+ARG GSL  H+V G+A+S SL+T
Sbjct:  172 LVDALLKCDGASLNFAGVALRNHFSTGPQLGTYLTAHYLTLLRNNIPALLGSLAFFGNPVGLIRGLGDGVSDFVNEPMKGLKRSVEELNPTFVMDGVARGTGSLARHTVSGIADSASLLT 291          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13618.2860.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMF7_ECTSI2.420e-19098.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KXT8_9PHAE8.320e-18296.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C849_9STRA1.190e-4737.13Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2F4H5_9STRA5.170e-2538.85Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S1XZQ2_9STRA5.190e-2538.01Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7R9WT54_9STRA9.260e-2449.09Hypothetical protein (Fragment) n=1 Tax=Craspedost... [more]
A0A7S2LN01_9STRA1.200e-2143.33Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2PQX2_9STRA1.340e-2143.33Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7R9UE31_9STRA4.810e-2137.97Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7R9ZE76_9STRA1.510e-2044.17Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031645Vacuolar protein sorting-associated protein 13, C-terminalPFAMPF16909VPS13_Ccoord: 133..290
e-value: 1.0E-39
score: 136.1
NoneNo IPR availablePANTHERPTHR16166:SF93VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 13Dcoord: 127..290
IPR026847Vacuolar protein sorting-associated protein 13PANTHERPTHR16166VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13coord: 127..290

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13618contigEcto-sp13_S_contig13618:457..4246 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13618.2860.1mRNA_Ecto-sp13_S_contig13618.2860.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13618 457..4261 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13618.2860.1 ID=prot_Ecto-sp13_S_contig13618.2860.1|Name=mRNA_Ecto-sp13_S_contig13618.2860.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=290bp
MLQPVRPGHQGGDNKCVRFTLVAAPRVKNVAYIKLASLNVEEFDLRLDEG
MVRWAQGLADRVMWTLVADRRADEMDKWPLPQEAFCSSQAGHPGGGKASG
ENADGSSVGGGQGSTGMLVSRGGGEGAFASRYVYLEVFQVSSVKVRLSLQ
RAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTL
TAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLL
KSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLITGA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031645VPS13_C
IPR026847VPS13