mRNA_Ecto-sp13_S_contig13618.2860.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13618.2860.1 vs. uniprot
Match: D7FMF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF7_ECTSI) HSP 1 Score: 560 bits (1444), Expect = 3.460e-194 Identity = 290/294 (98.64%), Postives = 293/294 (99.66%), Query Frame = 1
Query: 1 TSFPVMLQPVRPGHQGGDNKCVRFTLVAAPRVKNVAYIKLASLNVEEFDLRLDEGMVRWAQGLADRVMWTLVADRRADEMDKWPLPQEAFCSSQAGHPGGGKASGENADGSSVGGGQGSTGMLVSRGGGEGAFASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLITG 882
TSFPV+LQPVRPG+QGGDNKCVRFTLVAAPRVKNVAYIKLASLNVEEFDLRLDEGMVRWAQGLADRVMWTLVADRRADEMDKWPLPQEAFCSSQAGHPGGGKASGEN DGSSVGGGQGSTGM+VSRGGGEGAFASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLITG
Sbjct: 148 TSFPVLLQPVRPGYQGGDNKCVRFTLVAAPRVKNVAYIKLASLNVEEFDLRLDEGMVRWAQGLADRVMWTLVADRRADEMDKWPLPQEAFCSSQAGHPGGGKASGENIDGSSVGGGQGSTGMVVSRGGGEGAFASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLITG 441
BLAST of mRNA_Ecto-sp13_S_contig13618.2860.1 vs. uniprot
Match: A0A6H5KXT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXT8_9PHAE) HSP 1 Score: 550 bits (1416), Expect = 1.320e-185 Identity = 284/294 (96.60%), Postives = 290/294 (98.64%), Query Frame = 1
Query: 1 TSFPVMLQPVRPGHQGGDNKCVRFTLVAAPRVKNVAYIKLASLNVEEFDLRLDEGMVRWAQGLADRVMWTLVADRRADEMDKWPLPQEAFCSSQAGHPGGGKASGENADGSSVGGGQGSTGMLVSRGGGEGAFASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLITG 882
TSFPV+LQPVRPG+QGG+NKCVRFTLVAAPRVKNVAYIKLASLNVEEFDLRLDEGMVRWAQGLADRVMWTLVADRRADEMDKWPLP+EAFCSSQAGHPGGGK SGENADG SVGGGQG+T M+VSRGG EGAFASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLITG
Sbjct: 501 TSFPVLLQPVRPGYQGGNNKCVRFTLVAAPRVKNVAYIKLASLNVEEFDLRLDEGMVRWAQGLADRVMWTLVADRRADEMDKWPLPREAFCSSQAGHPGGGKPSGENADGGSVGGGQGTTAMVVSRGGSEGAFASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLITG 794
BLAST of mRNA_Ecto-sp13_S_contig13618.2860.1 vs. uniprot
Match: A0A836C849_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C849_9STRA) HSP 1 Score: 189 bits (479), Expect = 2.190e-50 Identity = 128/339 (37.76%), Postives = 162/339 (47.79%), Query Frame = 1
Query: 1 TSFPVMLQPVRPGHQGGDN-----KCVRFTLVAAPRVKNVAYIKLASLNVEEFDLRLDEGMVRWAQGLADRVMWTLVADRRA--------------DEMDK--WPLPQEAFCSSQAGHPGGGKASGENADGSSVGGGQGSTGMLVSRGGGEGAFASRYVYLEVFQ----------------------VSSVKVRLSLQRAKDSFDNVY--VGVKPGQMLLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLITG 882
T FPV+LQPV GG C R + AP V N+ Y K SL + +LRL+E +V WAQ AD+V L + DE W LP + Q + G +RYVY + +++ +VRLSLQR + V + QM+LD MMRMDSAHI L S I+HN T +L A HY +KQ LMLG+LEAFGNPVGL RG+ QG+QDF+ EPVLGL++SVE+L PEE G+ARG GSLL H+VGG+ANS S+I G
Sbjct: 5124 TPFPVLLQPVERCDDGGGGGKGGQHCARLMVRVAPHVANIVYCKALSLKLSPLELRLEESIVLWAQRFADKVRRYLQTEAAXXXXXXXXXXXXXXXDEASDAAWELPHTVLGAPQMPQQ-----------------------AAAAAPGASSPLWARYVYFHILATXXXXXXXXXXXXXXXXXXXXXIAAFQVRLSLQRPTQGAEEVRRAPALTVTQMVLDAMMRMDSAHINLASFIMHNETIATQQLGAIAAAHYLSTVKQHVLLMLGALEAFGNPVGLFRGVSQGVQDFISEPVLGLVRSVEELRPEEFFAGIARGGGSLLKHTVGGMANSASMIAG 5439
BLAST of mRNA_Ecto-sp13_S_contig13618.2860.1 vs. uniprot
Match: A0A7S2F4H5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F4H5_9STRA) HSP 1 Score: 110 bits (274), Expect = 5.800e-25 Identity = 61/157 (38.85%), Postives = 88/157 (56.05%), Query Frame = 1
Query: 409 YVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLIT 879
+ Y+E V +++ R+S+ R ++S +VYVG KP ++LLD++ R+DSA L+ L+V + L HY ++Q +GSLEA GNPVGLVRG QG D V EP+ GL+++VE H+VGGVANS + IT
Sbjct: 71 WTYVEELVVDTIRARVSVSRPRESAADVYVGFKPARLLLDVLQRIDSARFSLEPLMVRHRLIGPGELPAVVVRHYTSSVRQHLLSTVGSLEALGNPVGLVRGFMQGASDAVAEPLEGLVRTVETAXXXXXXXXXXXXXXXXXTHTVGGVANSAAQIT 227
BLAST of mRNA_Ecto-sp13_S_contig13618.2860.1 vs. uniprot
Match: A0A7S1XZQ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZQ2_9STRA) HSP 1 Score: 112 bits (279), Expect = 5.830e-25 Identity = 65/171 (38.01%), Postives = 96/171 (56.14%), Query Frame = 1
Query: 385 GEGAFASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKP------GQMLLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLIT 879
G G A+ Y E+ Q+ V+ S + +K + L+D++ RM+ A I+LK +V + L++ +HYERE+++ M+G+L GNPVGL+R + +G +DFV EP+ GLL SVE P L+ GM +G SLL +SVGGVANS SL+T
Sbjct: 7 GGGGAAAGLKYFELLQIDRVRFWASFKNSKSGAADAAAATAAQPKSTLASTLMDIVGRMEEARIRLKPFVVKDFFGVADGLSVQLYQHYEREIRRHFLEMIGALHLLGNPVGLMRSLREGAKDFVAEPMHGLLASVEQAKPAHLVKGMRKGTTSLLRNSVGGVANSASLLT 177
BLAST of mRNA_Ecto-sp13_S_contig13618.2860.1 vs. uniprot
Match: A0A7R9WT54_9STRA (Hypothetical protein (Fragment) n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WT54_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.030e-23 Identity = 54/110 (49.09%), Postives = 72/110 (65.45%), Query Frame = 1
Query: 550 AHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLIT 879
A + + + N +T +L+ HY L+Q +LGSL AFGNP+GL+RG+G+GM DFV EPV GL KSV++L P L G+ARG GSL H+VGG A+S SL+T
Sbjct: 1 ASLNFAGISLRNHISTTPQLSTYLLTHYMASLRQNVPALLGSLAAFGNPLGLIRGVGEGMADFVSEPVKGLQKSVQELDPGYLFDGVARGTGSLARHTVGGFADSASLLT 110
BLAST of mRNA_Ecto-sp13_S_contig13618.2860.1 vs. uniprot
Match: A0A7S2LN01_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LN01_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.340e-21 Identity = 52/120 (43.33%), Postives = 78/120 (65.00%), Query Frame = 1
Query: 520 LLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLIT 879
++D ++R + A + + + N T ++T HY L+ +LGSL AFGNP+GL+RG+G G+ DFV EP+ GL KS+E+L P ++ G+ARG GSL H++GGVA+S SL+T
Sbjct: 281 IVDALLRCEEASLAFPGIGIRNYLTNSPQVTTYLLAHYLAALRSNVPSLLGSLAAFGNPLGLIRGLGDGVSDFVSEPIKGLKKSLEELDPTFVIDGVARGTGSLARHTIGGVADSASLLT 400
BLAST of mRNA_Ecto-sp13_S_contig13618.2860.1 vs. uniprot
Match: A0A7S2PQX2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PQX2_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.510e-21 Identity = 52/120 (43.33%), Postives = 78/120 (65.00%), Query Frame = 1
Query: 520 LLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLIT 879
++D ++R + A + + + N T ++T HY L+ +LGSL AFGNP+GL+RG+G G+ DFV EP+ GL KS+E+L P ++ G+ARG GSL H++GGVA+S SL+T
Sbjct: 492 IVDALLRCEEASLAFPGIGIRNYLTNSPQVTTYLLAHYLAALRSNVPSLLGSLAAFGNPLGLIRGLGDGVSDFVSEPIKGLKKSLEELDPTFVIDGVARGTGSLARHTIGGVADSASLLT 611
BLAST of mRNA_Ecto-sp13_S_contig13618.2860.1 vs. uniprot
Match: A0A7R9UE31_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE31_9STRA) HSP 1 Score: 103 bits (257), Expect = 5.410e-21 Identity = 60/158 (37.97%), Postives = 89/158 (56.33%), Query Frame = 1
Query: 415 YLEVFQVSSVKVRLSLQRAK-DSFDNVYVGVKPG--QMLLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLIT 879
Y E+ Q +++ +S + D V P L+D++ R+D A I+LK L+V + L+ +HYERE ++ ++G+L GNP+GL+R G +DFV EP+LGL+ S+E P L+ G RG SLL +SVGGV NS SL+T
Sbjct: 700 YFELLQADRLRMSVSYKNTSADRLRRTSRKVIPALTSALIDMVGRLDGARIRLKPLVVKDFFGPLDFLSEQVSQHYEREARRHVLELIGALHLLGNPIGLMRSFRDGAKDFVAEPMLGLMDSIEQAKPAALVKGFKRGTTSLLKNSVGGVVNSASLLT 857
BLAST of mRNA_Ecto-sp13_S_contig13618.2860.1 vs. uniprot
Match: A0A7R9ZE76_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZE76_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.680e-20 Identity = 53/120 (44.17%), Postives = 76/120 (63.33%), Query Frame = 1
Query: 520 LLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLIT 879
L+D +++ D A + + + N +T +L HY L+ +LGSL FGNPVGL+RG+G G+ DFV EP+ GL +SVE+L P +M G+ARG GSL H+V G+A+S SL+T
Sbjct: 172 LVDALLKCDGASLNFAGVALRNHFSTGPQLGTYLTAHYLTLLRNNIPALLGSLAFFGNPVGLIRGLGDGVSDFVNEPMKGLKRSVEELNPTFVMDGVARGTGSLARHTVSGIADSASLLT 291 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13618.2860.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13618.2860.1 >prot_Ecto-sp13_S_contig13618.2860.1 ID=prot_Ecto-sp13_S_contig13618.2860.1|Name=mRNA_Ecto-sp13_S_contig13618.2860.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=290bp MLQPVRPGHQGGDNKCVRFTLVAAPRVKNVAYIKLASLNVEEFDLRLDEGback to top mRNA from alignment at Ecto-sp13_S_contig13618:457..4261- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13618.2860.1 ID=mRNA_Ecto-sp13_S_contig13618.2860.1|Name=mRNA_Ecto-sp13_S_contig13618.2860.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3805bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13618:457..4261- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13618:457..4261- >mRNA_Ecto-sp13_S_contig13618.2860.1 ID=mRNA_Ecto-sp13_S_contig13618.2860.1|Name=mRNA_Ecto-sp13_S_contig13618.2860.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=870bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13618:457..4261- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |