prot_Ecto-sp13_S_contig13616.2859.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13616.2859.1
Unique Nameprot_Ecto-sp13_S_contig13616.2859.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length482
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13616.2859.1 vs. uniprot
Match: D7FT47_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT47_ECTSI)

HSP 1 Score: 710 bits (1832), Expect = 7.920e-249
Identity = 396/474 (83.54%), Postives = 410/474 (86.50%), Query Frame = 0 
Query:    1 KHADALKPLREAVAVLDEAIAVVSTNEGGAANSGAGTNAGSSRSTPSTTEGRVAALTRTLTGTLAFLGTSLLAPEVQPSGDDGSXXXXXXXXXXXXRGGATPGAIKEAAEKVTAAAPGFSCDDKGPTVVDSAAAGSSKEEDEAIDVLKRAHEMLKAETAAMAAAGAGQKGGPAGVFSAVGESRGEADVRKQTAKVLDTLSEAYGREKRWECARSAAEQSLTAWRSLGVAGRVGTATSLLSLGHLLLQLYGVGAGFEEASARWEEAATCFKDCAERPSVEAEVRLKIAGYYTKVARSDPARLDSLEGKISAHYSEAAVLFARERDEKTSSLKRAAAALVAAQAPRDNTAESSXXXXXXXXXXXXLVDSLEPDGRSRWELAEKEAFAWEGYAGAAGDDHEAAVRALTKAEKLLDHASVSDKDERWTLRRVGILHSLALALARSGQHAMAENKLLEAIRELQELDGVDSNAEACAHK 474
            KHADAL+PLREAVAVLDEAIA VS NEGG ANS AGTNA SS  TPS TEGR+ ALTRTLTGTLAFLGTSLLAPEVQPS + GS             GG TPG +K  AEKVT  APGFSCDDKGP V DS  AGSSKE DEAIDVLKRAHEMLKAET AMA AG GQKGG AGV+SAVGESRGEADVRKQTAKVLDTLSEAYGREKRWE AR AAEQSLTAWRSLGVAGRVG A SLLSLGHLLLQL+GVGAGFEEASARWEEAATCFK CAERPSVEAEVRLKIAGYYTKVARSDPARL+SLEGKISAHYSEAAVLFARERDEKTSSLKRAA A+ AAQAPRD TAE S            LVDSLEPDGRSRWELAE+EAFAWEGYAGAAG+DHEAAV AL KAEKLLDHASVSDKDERWTLR+VG+LHSLALALARSG+HAMAENKLLEAIRELQ+LDGVDS AEAC HK
Sbjct:  309 KHADALEPLREAVAVLDEAIAGVSANEGGVANSSAGTNARSSPPTPSITEGRITALTRTLTGTLAFLGTSLLAPEVQPSANYGSNGSSTTTTSS---GGVTPGVMKGGAEKVTVPAPGFSCDDKGPIVADSGEAGSSKEADEAIDVLKRAHEMLKAETVAMATAGPGQKGGLAGVYSAVGESRGEADVRKQTAKVLDTLSEAYGREKRWERARLAAEQSLTAWRSLGVAGRVGAAASLLSLGHLLLQLHGVGAGFEEASARWEEAATCFKGCAERPSVEAEVRLKIAGYYTKVARSDPARLESLEGKISAHYSEAAVLFARERDEKTSSLKRAAEAVAAAQAPRDKTAEGSGSAEPVPPLPPPLVDSLEPDGRSRWELAEQEAFAWEGYAGAAGEDHEAAVTALAKAEKLLDHASVSDKDERWTLRKVGVLHSLALALARSGEHAMAENKLLEAIRELQQLDGVDSIAEACVHK 779
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13616.2859.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FT47_ECTSI7.920e-24983.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 135..350
e-value: 3.9E-7
score: 31.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13616contigEcto-sp13_S_contig13616:216..4463 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13616.2859.1mRNA_Ecto-sp13_S_contig13616.2859.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13616 216..4463 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13616.2859.1 ID=prot_Ecto-sp13_S_contig13616.2859.1|Name=mRNA_Ecto-sp13_S_contig13616.2859.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=482bp
KHADALKPLREAVAVLDEAIAVVSTNEGGAANSGAGTNAGSSRSTPSTTE
GRVAALTRTLTGTLAFLGTSLLAPEVQPSGDDGSNSSSSSSTTTSVRGGA
TPGAIKEAAEKVTAAAPGFSCDDKGPTVVDSAAAGSSKEEDEAIDVLKRA
HEMLKAETAAMAAAGAGQKGGPAGVFSAVGESRGEADVRKQTAKVLDTLS
EAYGREKRWECARSAAEQSLTAWRSLGVAGRVGTATSLLSLGHLLLQLYG
VGAGFEEASARWEEAATCFKDCAERPSVEAEVRLKIAGYYTKVARSDPAR
LDSLEGKISAHYSEAAVLFARERDEKTSSLKRAAAALVAAQAPRDNTAES
SGSADPIPPPPPPLVDSLEPDGRSRWELAEKEAFAWEGYAGAAGDDHEAA
VRALTKAEKLLDHASVSDKDERWTLRRVGILHSLALALARSGQHAMAENK
LLEAIRELQELDGVDSNAEACAHKASGSFSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf