mRNA_Ecto-sp13_S_contig13608.2854.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13608.2854.1
Unique NamemRNA_Ecto-sp13_S_contig13608.2854.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig13608.2854.1 vs. uniprot
Match: D8LQL6_ECTSI (Mercuric reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQL6_ECTSI)

HSP 1 Score: 580 bits (1494), Expect = 1.080e-204
Identity = 288/291 (98.97%), Postives = 290/291 (99.66%), Query Frame = 1
Query:    1 ADLLGPLTGTKDMTPAINIRPGSKDPVPAAPQAEFLPKDDYNVKLVSNVGPTDYVNPEPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGCVPSKALIACATRLHEVQNSAEFGVEIKGEVGVDFGKVMKRMRRVRSDISEHDSVARYSRDFVKHIFLGRGVFTSADTIEVAGKKLKFDKAMVATGASAAVPPVPGLKDTPHLTNSNFWNLEELPPRMGVIGAGPIGLEMSQAMQRFGCKVTCFEYADQLLPREDPDAAKCLEGALLEDGLDIRLGA 873
            ADLLGPLTGTKDMTPAINIRPGSKDPVPAAPQAEFLPKDDYNVKLVSNVGPTDYVNPEPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGCVPSKALIACATRLHEVQ+SAEFGVEIKGEVGVDFGKVMKRMRRVRSDISEHDSVARYSRDFVKHIFLGRGVFTSADTIEVAGKKLKFDKAMVATGASAAVPPVPGLKDTPHLTNSNFWNLEELPPRMGVIGAGPIGLEMSQAMQR GCKVTCFEYADQLLPREDPDAA+CLEGALLEDGLDIRLGA
Sbjct:   29 ADLLGPLTGTKDMTPAINIRPGSKDPVPAAPQAEFLPKDDYNVKLVSNVGPTDYVNPEPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGCVPSKALIACATRLHEVQHSAEFGVEIKGEVGVDFGKVMKRMRRVRSDISEHDSVARYSRDFVKHIFLGRGVFTSADTIEVAGKKLKFDKAMVATGASAAVPPVPGLKDTPHLTNSNFWNLEELPPRMGVIGAGPIGLEMSQAMQRLGCKVTCFEYADQLLPREDPDAARCLEGALLEDGLDIRLGA 319          
BLAST of mRNA_Ecto-sp13_S_contig13608.2854.1 vs. uniprot
Match: A0A7S2UXV1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXV1_9STRA)

HSP 1 Score: 388 bits (997), Expect = 2.580e-129
Identity = 189/291 (64.95%), Postives = 233/291 (80.07%), Query Frame = 1
Query:    1 ADLLGPLTGTKDMTPAINIRPGSKDPVPAAPQAEFLPKDDYNVKLVSNVGPTDYVNPEPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGCVPSKALIACATRLHEVQNSAEFGVEI-KGEVGVDFGKVMKRMRRVRSDISEHDSVARYSRDFVKHIFLGRGVFTSADTIEVAGKKLKFDKAMVATGASAAVPPVPGLKDTPHLTNSNFWNLEELPPRMGVIGAGPIGLEMSQAMQRFGCKVTCFEYADQLLPREDPDAAKCLEGALLEDGLDIRLG 870
            +DLLGPL G +++TP IN+RPG+   VP AP+A   P D++N  LV NV P  Y NPEP E YDLVVIG+G +GLLSVI+   LGK CA++E+  MGGDCLN+GCVPSKALI+CA R +EV+NSAEFGV + +GEV +DFG VM RMR++R+ ISEHDSVARY+RDF +HIFLG   FT   +IEVAGK L F KAM+ATGASA++ P+PGLKDTPHLTN+NF+NL ELPPR+ VIG GPIGLEM+Q++QRFGC+VTCFE   QLLP+ED DAA  L+ +L +DGL I+LG
Sbjct:   30 SDLLGPLYGDRELTPTINLRPGTTAEVPVAPEAHVSPMDEHNTHLVDNVHPPTYENPEPREDYDLVVIGAGVSGLLSVIMGKALGKRCAMIEKQYMGGDCLNIGCVPSKALISCARRFNEVKNSAEFGVILPEGEVRIDFGHVMARMRKIRASISEHDSVARYARDFCEHIFLGHARFTGDHSIEVAGKTLNFKKAMIATGASASIVPIPGLKDTPHLTNANFFNLTELPPRLSVIGCGPIGLEMAQSLQRFGCQVTCFEAMPQLLPKEDKDAALLLKESLEKDGLVIKLG 320          
BLAST of mRNA_Ecto-sp13_S_contig13608.2854.1 vs. uniprot
Match: A0A7S3XS08_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XS08_HETAK)

HSP 1 Score: 357 bits (916), Expect = 7.980e-118
Identity = 175/258 (67.83%), Postives = 212/258 (82.17%), Query Frame = 1
Query:  115 DDYNVKLVSNVGPTDYVNPEPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGCVPSKALIACATRLHEVQNSAEFGVEI-KGEVGVDFGKVMKRMRRVRSDISEHDSVARYSRDFVKHIFLGRGVFTSADTIEVAGKK----LKFDKAMVATGASAAVPPVPGLKDTPHLTNSNFWNLEELPPRMGVIGAGPIGLEMSQAMQRFGCKVTCFEYADQLLPREDPDAAKCLEGALLEDGLDIRLGA 873
            D++N KLV+NV PTDY NPEPLEKYDLVV+G+G +GLLSVI+ + LGK CAL+E+H MGGDCLN+GCVPSKALI+CA RL EVQ SAEFGV + +GEV +DFG VM RMRR+R+ IS+HDSVARYSRDF +H+FLG   F   DT+ V+G      L+FDKAMVATGASAA+ P+PGL   PHLTN+NF+NL ELPPR+ VIGAGPIGLEM+Q+++RFG +VTCFE   QLLPRED DAA  L+ A+L DG++IRLGA
Sbjct:    2 DEHNTKLVNNVHPTDYQNPEPLEKYDLVVLGAGVSGLLSVIMGSALGKKCALIEKHYMGGDCLNIGCVPSKALISCARRLKEVQESAEFGVRLPEGEVTIDFGAVMARMRRIRAAISDHDSVARYSRDFCEHVFLGHAEFAGPDTVRVSGANGDVTLRFDKAMVATGASAAIVPIPGLVGAPHLTNANFFNLTELPPRVAVIGAGPIGLEMAQSLRRFGAQVTCFEAFPQLLPREDQDAAAVLKEAILRDGVEIRLGA 259          
BLAST of mRNA_Ecto-sp13_S_contig13608.2854.1 vs. uniprot
Match: A0A7S2SRP0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRP0_9STRA)

HSP 1 Score: 297 bits (760), Expect = 2.490e-94
Identity = 149/249 (59.84%), Postives = 186/249 (74.70%), Query Frame = 1
Query:  103 FLPKDDYNVKLVSNVGPTDYVNPEPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGCVPSKALIACATRLHEVQNSAEFGVEI-KGEVGVDFGKVMKRMRRVRSDISEHDSVARYSRDFVKHIFLGRGVFTSADTIEVAGKK--LKFDKAMVATGASAAVPPVPGLKDTPHLTNSNFWNLEELPPRMGVIGAGPIGLEMSQAMQRFGCKVTCFEYADQLLPREDPDAAKCLEGAL 840
              P+D+YN   V+ + P + VNP P E YDLVVIG+G AGLLSVI A  LGK  AL+E+H MGGDCLNVGC PSKA+I CA  +H+V+ SA FGV + +GEV VDFG VM+RMR +R+ I+ HD V RY RDF   IF+G   FT  +TI V G +  + F+KAMVATGASAA+PP+PGL+  PHLTN++F+NLEELPPRM +IGAGPIG+E++Q M R G +VT  + A QLL REDPDAA+CL+  L
Sbjct:    1 MAPEDEYNTAAVAAIHPPERVNPTPKESYDLVVIGAGVAGLLSVICAKALGKRAALIERHYMGGDCLNVGCFPSKAIIRCARAVHDVKTSARFGVILPEGEVRVDFGAVMQRMRMLRASIAPHDGVERYCRDFCDDIFIGDAKFTGPNTITVEGMEQPIVFEKAMVATGASAAIPPIPGLRSVPHLTNNDFFNLEELPPRMCLIGAGPIGIELAQTMARLGSEVTIVDIAPQLLIREDPDAAQCLQQIL 249          
BLAST of mRNA_Ecto-sp13_S_contig13608.2854.1 vs. uniprot
Match: F0Y060_AURAN (Uncharacterized protein MER2 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y060_AURAN)

HSP 1 Score: 295 bits (756), Expect = 2.010e-93
Identity = 148/253 (58.50%), Postives = 188/253 (74.31%), Query Frame = 1
Query:  118 DYNVKLVSNVGPTDYVNPEPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGCVPSKALIACATRLHEVQNSAEFGVEIKGEVGVDFGKVMKRMRRVRSDISEHDSVARYSRDFVKHIFLGRGVFTSADTIEVAG-----KKLKFDKAMVATGASAAVPPVPGLKDTPHLTNSNFWNLEELPPRMGVIGAGPIGLEMSQAMQRFGCKVTCFEYADQLLPREDPDAAKCLEGALLEDGLDI 861
            ++ V  V++VGP  +  P+  EKYDLVVIG+G AGLLSVI+A  LGK   L+E+H MGGDCLNVGC PSKALIACA + HE++++A+FGV + G+V VDFG VMKRMR +R+ I+ HD V RY RDF   + +G   F S   + +       + + FDK M+ATGASAAV PVPGL+D PHLTN NF+NLE LPPR  +IGAGPIG+EM+Q++QRFGC VT FE A QLLPREDPDAAK +  AL+ DG+++
Sbjct:    7 EHVVSAVAHVGPKAHF-PKLKEKYDLVVIGAGVAGLLSVIVAKSLGKKALLIEKHYMGGDCLNVGCFPSKALIACARKCHELKHAADFGVTVSGDVTVDFGFVMKRMRALRAGIAPHDGVERYGRDFCDDVCVGVAKFASPTEVVITSHGGETQSVAFDKCMIATGASAAVVPVPGLRDCPHLTNGNFFNLEALPPRACLIGAGPIGIEMAQSLQRFGCAVTIFEVAPQLLPREDPDAAKLVTEALIADGVEV 258          
BLAST of mRNA_Ecto-sp13_S_contig13608.2854.1 vs. uniprot
Match: W4LUV9_9BACT (DEP domain-containing protein n=2 Tax=Candidatus Entotheonella TaxID=93171 RepID=W4LUV9_9BACT)

HSP 1 Score: 292 bits (748), Expect = 5.360e-91
Identity = 150/299 (50.17%), Postives = 199/299 (66.56%), Query Frame = 1
Query:    1 ADLLGPLTGTKDMTPAINIRPGSKDPVPAAPQ--------AEFLPKDDYNVKLVSNVGPTDYVNPEPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGCVPSKALIACATRLHEVQNSAEFGVEIKGEVGVDFGKVMKRMRRVRSDISEHDSVARYSRDFVKHIFLGRGVFTSADTIEVAGKKLKFDKAMVATGASAAVPPVPGLKDTPHLTNSNFWNLEELPPRMGVIGAGPIGLEMSQAMQRFGCKVTCFEYADQLLPREDPDAAKCLEGALLEDGLDIRLGA 873
            AD + P+T  +D    ++++P   D  P   Q            P D +N KL+    P  +VNP P   Y+LVVIG+G  GL+S   + GLG   AL+E H +GGDCLNVGCVPSKAL+ CA     V+++AEFGV + G + VDFG VM+RMRR+R+ I+ +DSV R++ D    +F+GRG FT  +TIEV G  L F KA++ATG +AA+PP+PGL + P+LTN+  +NL ELPPR+GVIGAGPIGLEM+QA QRFG +VT F    Q+L +EDPDAA+ +E AL  DG+   LGA
Sbjct:  120 ADFIAPITSDEDAV--VSLQPSMPDRDPDLAQFAQDDLDHLNISPLDTHNAKLLDLTHPKSWVNPAPKASYNLVVIGAGTGGLVSAAGSAGLGARVALIEAHLLGGDCLNVGCVPSKALLRCAKAAVAVRHAAEFGVRVDGNISVDFGYVMERMRRLRASIAPNDSVKRFTEDVGVDMFMGRGRFTGKNTIEVNGDVLHFSKAVIATGGTAAIPPIPGLAEAPYLTNATLFNLTELPPRLGVIGAGPIGLEMAQAFQRFGSQVTVFARDTQILSKEDPDAAQVVEAALRRDGVAFELGA 416          
BLAST of mRNA_Ecto-sp13_S_contig13608.2854.1 vs. uniprot
Match: A0A7S3LJY5_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LJY5_9STRA)

HSP 1 Score: 287 bits (735), Expect = 2.480e-89
Identity = 140/255 (54.90%), Postives = 192/255 (75.29%), Query Frame = 1
Query:  100 EFLPKDDYNVKLVSNVGPTDYVNPEPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGCVPSKALIACATRLHEVQNSAEFGVEIKGEVGVDFGKVMKRMRRVRSDISEHDSVARYSRDFVKHIFLGRGVFTSADTIEVAGKKLKFDKAMVATGASAAVPPVPGLKDTPHLTNSNFWNLEELPPRMGVIGAGPIGLEMSQAMQRFGCKVTCFEYADQLLPREDPDAAKCLEGALLEDGLDIR 864
            E  P D++N+KL+  V P  +V+P PL+KY+LVVIG+GA GL+S I + GL    AL+E+H +GGDCLNVGCVPSKALI CA  + E++N+ EFG+EI+G+  V+FG++M+RMRR+R+ I+  DS  RY+   V ++F G   FTS +T+EV GK+LKF K ++ATGA A VPP+PGLK+ P+LTNS+ +NL ELP   GVIG+GPIG+EM+Q   RFG KV  F+  +++LPREDPDAA  ++ AL EDG++ R
Sbjct:  130 EVSPLDEHNIKLLDLVKPKSWVDPVPLDKYNLVVIGAGAGGLISAIQSAGLQGKVALIEKHLLGGDCLNVGCVPSKALIRCARAVKEMKNAEEFGIEIEGKANVNFGRIMERMRRLRAKIAPADSAKRYTGLGV-NVFQGHARFTSKNTVEVNGKRLKFAKCIIATGARAFVPPIPGLKEVPYLTNSSLFNLTELPEVFGVIGSGPIGVEMAQCFARFGSKVVLFDLMEKILPREDPDAASIIQSALEEDGVEFR 383          
BLAST of mRNA_Ecto-sp13_S_contig13608.2854.1 vs. uniprot
Match: A0A835ZL58_9STRA (Mercuric reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL58_9STRA)

HSP 1 Score: 283 bits (723), Expect = 1.010e-87
Identity = 157/320 (49.06%), Postives = 206/320 (64.38%), Query Frame = 1
Query:    1 ADLLGPLTGTKDMTPAINIRPGSKDPVP------------AAPQAEFLPKDD-YNVKLVSNVGPTDYVNPEPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGCVPSKALIACATRLHEVQNSAEFGVEIKGE-VGVDFGKVMKRMRRVRSDISEHDSVARYSRDFVKHIFLGRGVFTSADTIEVAG-----KKLKFDKAMVATGASAAVPPVPGLKD----------TPHLTNSNFWNLEELPPRMGVIGAGPIGLEMSQAMQRFGCKVTCFEYADQLLPREDPDAAKCLEGALLEDGLDIRLGA 873
            ADLLGPL G     P   +  G   P P            AA +A  LP +D +N  LV NV P DYVNP P + YDLVVIG+G +GLLSVI+A GLG  CALVE+H MGGDCLNVGCVPSKALIACA R+H+V+ +A FGV ++ + V VDF  +M+RMR +R++IS  D VARY+RDF +H+FLG+  F+ A ++ V+G     + L+F KAM+ATG S                      P+L+N+NF+NLEELPPR+ V+GAGPIGLE++Q+M R G +VTC E   +++ RED DAA  +  ++  DG+    GA
Sbjct:   25 ADLLGPLHG-----PRTGLTTGGAPPPPTPQPQVNAADFAAAEEAPALPAEDKFNKALVDNVHPPDYVNPAPSDCYDLVVIGAGVSGLLSVIMAKGLGMRCALVERHYMGGDCLNVGCVPSKALIACARRVHDVRTAAPFGVRLRADAVEVDFPAIMERMRAIRAEISAADGVARYARDFCEHVFLGQATFSGAHSVIVSGGAAGDRVLRFRKAMIATGGSXXXXXXXXXXXXXXXXXXXGGVPYLSNANFFNLEELPPRLCVVGAGPIGLELAQSMARLGSRVTCLERGARIMGREDEDAAAAVRASMERDGVTFVTGA 339          
BLAST of mRNA_Ecto-sp13_S_contig13608.2854.1 vs. uniprot
Match: UPI0003607019 (FAD-containing oxidoreductase n=1 Tax=Desulfobacter curvatus TaxID=2290 RepID=UPI0003607019)

HSP 1 Score: 283 bits (723), Expect = 2.750e-87
Identity = 145/290 (50.00%), Postives = 198/290 (68.28%), Query Frame = 1
Query:    4 DLLGPLTGTKDMTPAINIRPGSKDPVPAAPQAEFL------PKDDYNVKLVSNVGPTDYVNPEPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGCVPSKALIACATRLHEVQNSAEFGVEIKGEVGVDFGKVMKRMRRVRSDISEHDSVARYSRDFVKHIFLGRGVFTSADTIEVAGKKLKFDKAMVATGASAAVPPVPGLKDTPHLTNSNFWNLEELPPRMGVIGAGPIGLEMSQAMQRFGCKVTCFEYADQLLPREDPDAAKCLEGALLEDGL 855
            D L PLT  +D +  +      +DP  A+ +   L      P D YN++++  + P  +V+P+P   Y+LVVIG+GA GL+S   A G+G   AL+E H +GGDCL VGCVPSKAL+ CA     V+ ++EFGV I GEV VDFG VM+R+RR+R+DI+  DS  RY+      +F+G+G FT  +TI V G+ LKF KA+VATG +AAVPP+PGLK  P+LTN++ +NL ELP RMG+IGAGPIG+EM+QA QR G +VT      ++LPREDP+AA+ +E AL +DG+
Sbjct:  121 DFLAPLTSLQDRSMTLQPDIPERDPDLASFEQVDLNACGVSPLDSYNIRMLDLLHPKVWVDPKPKSSYNLVVIGAGAGGLVSAAGAAGVGARVALIESHLLGGDCLTVGCVPSKALLRCAKAAAAVRKASEFGVNISGEVSVDFGAVMERLRRLRADIAPVDSAQRYTEKLGVDVFMGKGRFTGRNTINVNGQTLKFTKAVVATGGTAAVPPIPGLKQAPYLTNASVFNLTELPERMGIIGAGPIGMEMAQAFQRLGSQVTVLSRGGKILPREDPEAARVVETALEKDGV 410          
BLAST of mRNA_Ecto-sp13_S_contig13608.2854.1 vs. uniprot
Match: A0A1G1G376_9BACT (Mercuric reductase n=1 Tax=Nitrospirae bacterium GWD2_57_9 TaxID=1801701 RepID=A0A1G1G376_9BACT)

HSP 1 Score: 278 bits (710), Expect = 5.330e-87
Identity = 139/260 (53.46%), Postives = 181/260 (69.62%), Query Frame = 1
Query:   94 QAEFLPKDDYNVKLVSNVGPTDYVNPEPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGCVPSKALIACATRLHEVQNSAEFGVEIKGEVGVDFGKVMKRMRRVRSDISEHDSVARYSRDFVKHIFLGRGVFTSADTIEVAGKKLKFDKAMVATGASAAVPPVPGLKDTPHLTNSNFWNLEELPPRMGVIGAGPIGLEMSQAMQRFGCKVTCFEYADQLLPREDPDAAKCLEGALLEDGLDIRLGA 873
            Q   LPKD+YN KLV NV P ++ NP+P  KY+LVVIG+G AGL++   A GLG   ALVE+H MGGDCLNVGCVPSK +I  A   ++V+ + EFGV   G   VDFGK M+RMRR+R+ IS HDSV R+S++    +F+G G FT  D+I V GK L+F KA + TGA AA PP+PG+++T +LTN N + L ELP R+ VIG GPIG E++QA  R G +VT  +    +LPRED DAA+ +  AL+ DG+ +RL A
Sbjct:    5 QPLVLPKDEYNEKLVRNVHPAEWKNPDPAPKYNLVVIGAGTAGLVTAAGAAGLGAKVALVERHLMGGDCLNVGCVPSKGIIRTARAAYDVKTAGEFGVSSGGAAVVDFGKAMERMRRIRAGISFHDSVERFSKELGVDVFIGHGKFTGPDSIAVDGKLLRFAKAAICTGARAAAPPIPGIEETGYLTNENVFWLTELPKRLAVIGGGPIGCELAQAFARMGSQVTILQRGGHVLPREDADAAEFVHKALIRDGVALRLDA 264          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13608.2854.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQL6_ECTSI1.080e-20498.97Mercuric reductase n=2 Tax=Ectocarpus TaxID=2879 R... [more]
A0A7S2UXV1_9STRA2.580e-12964.95Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XS08_HETAK7.980e-11867.83Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2SRP0_9STRA2.490e-9459.84Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0Y060_AURAN2.010e-9358.50Uncharacterized protein MER2 n=1 Tax=Aureococcus a... [more]
W4LUV9_9BACT5.360e-9150.17DEP domain-containing protein n=2 Tax=Candidatus E... [more]
A0A7S3LJY5_9STRA2.480e-8954.90Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A835ZL58_9STRA1.010e-8749.06Mercuric reductase n=1 Tax=Tribonema minus TaxID=3... [more]
UPI00036070192.750e-8750.00FAD-containing oxidoreductase n=1 Tax=Desulfobacte... [more]
A0A1G1G376_9BACT5.330e-8753.46Mercuric reductase n=1 Tax=Nitrospirae bacterium G... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13608contigEcto-sp13_S_contig13608:346..3630 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score582.8
Seed ortholog evalue8.9e-164
Seed eggNOG ortholog2880.D8LQL6
Model size873
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.dihydrolipoyl dehydrogenase activity
EggNOG OGsCOG1249@1,KOG1335@2759
Cds size873
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13608.2854.1prot_Ecto-sp13_S_contig13608.2854.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13608 346..3630 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462726.7882972-CDS-Ecto-sp13_S_contig13608:345..4561681462726.7882972-CDS-Ecto-sp13_S_contig13608:345..456Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13608 346..456 -
1681462726.8066597-CDS-Ecto-sp13_S_contig13608:1162..13421681462726.8066597-CDS-Ecto-sp13_S_contig13608:1162..1342Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13608 1163..1342 -
1681462726.8172362-CDS-Ecto-sp13_S_contig13608:1655..17721681462726.8172362-CDS-Ecto-sp13_S_contig13608:1655..1772Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13608 1656..1772 -
1681462726.826828-CDS-Ecto-sp13_S_contig13608:2219..23571681462726.826828-CDS-Ecto-sp13_S_contig13608:2219..2357Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13608 2220..2357 -
1681462726.834528-CDS-Ecto-sp13_S_contig13608:2969..31011681462726.834528-CDS-Ecto-sp13_S_contig13608:2969..3101Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13608 2970..3101 -
1681462726.842171-CDS-Ecto-sp13_S_contig13608:3435..36301681462726.842171-CDS-Ecto-sp13_S_contig13608:3435..3630Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13608 3436..3630 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13608.2854.1

>prot_Ecto-sp13_S_contig13608.2854.1 ID=prot_Ecto-sp13_S_contig13608.2854.1|Name=mRNA_Ecto-sp13_S_contig13608.2854.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=291bp
ADLLGPLTGTKDMTPAINIRPGSKDPVPAAPQAEFLPKDDYNVKLVSNVG
PTDYVNPEPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDC
LNVGCVPSKALIACATRLHEVQNSAEFGVEIKGEVGVDFGKVMKRMRRVR
SDISEHDSVARYSRDFVKHIFLGRGVFTSADTIEVAGKKLKFDKAMVATG
ASAAVPPVPGLKDTPHLTNSNFWNLEELPPRMGVIGAGPIGLEMSQAMQR
FGCKVTCFEYADQLLPREDPDAAKCLEGALLEDGLDIRLGA
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mRNA from alignment at Ecto-sp13_S_contig13608:346..3630-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13608.2854.1 ID=mRNA_Ecto-sp13_S_contig13608.2854.1|Name=mRNA_Ecto-sp13_S_contig13608.2854.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3285bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13608:346..3630- (Ectocarpus species13 EcNAP12_S_4_19m)
GCGGATCTCCTTGGTCCCCTCACGGGCACCAAGGACATGACCCCTGCCAT CAACATCAGGCCCGGCTCGAAGGACCCGGTTCCCGCCGCCCCGCAGGCGG AGTTCCTCCCCAAGGATGACTACAACGTCAAGCTCGTGAGCAACGTCGGC CCTACTGACTACGTCAACCCGGAGCCGCTCGAGAAGTATGACCTGGTGAG AGAACACGCTCACCAACACCATGACTTACCGCTGGGCTTACGCGGGCCCC CGACTGCTTTGAGGCTGAGCGAAGCGTTACTACGTCGTGCTGCTTGAGCG ATTTTCCTTTTTGCTCTGGCGTGCGGAGAGCGAGAAGATTGCTCCCGGCT CGGGCGCGGCCGGCACCCTGGGTGCTGCCGTGCATACCGCATTTTACGGT GCCCTTCGCTAGGCTTTGTTTCTCACAAACGTTTTCCACGTGCTTGCCTT ACTGATGCTGCCACTGGTATGGTGCTGGTGCTGGTGATGCTGGTGGTGTT GTTGCTGCTGTTGACCGAACACGGCGAAGGTGGTGATTGGCTCAGGTGCA GCGGGATTGCTGAGCGTGATCATTGCGAACGGGCTGGGCAAGACTTGCGC CCTGGTGGAGCAGCACGCCATGGGCGGCGACTGCCTGAACGTGGGCTGCG TGCCTTCCAAGGTAAACTTGACCTTTGCCGTCCGTGCCGTACGGAAGGAC GAAATCGGCACACAGACTTTTGATATGGAGAGACGTATTTGCTACATCAC GCCCTAGAACAACCTCGCTAGAGCGGAAATAGAGTCGAGACGAGGGATGG GCCTCGGGTCGGGAGAGCAGGAAGAAGCCTATTGGGTGAACCGTAAACCA TTCCATGTTTCTCTTTGACACAACACGAGAAAATAACACGGGAAGGATAT TGGAGATTCTTTCTCGTGTGCGGCAAATGTCTTGACCGAAAGGCGTGGAC CTTGAGAAGAGGCATTTAATAGGGCCTTGGCGCACCGAGGCCTCGACGTT ATTGACCCCGTACTTTCTTCTAAGGCGTGTATGTCAATGCAAGGTTTTCG CGCCAAACCAATGACGGCGGTCATACCTCCGAACAACTCTTCTTCGCTCT CCTCACAACCATACTGGTTGCCGTGTCTGTTTGCTTTTGTGCAGCTGTCG CAGCAGAAGCTCCTTATGCCCCCCCTACCAGTCGTGTTTGCACACGCTAT ATGGGGCATTCAGATTTTCAAGCTCGAAGGAACTACATCTGACCACTTTT GAATTGAACACGCTGTTGTGTAGGCTCTGATCGCGTGCGCGACCAGACTG CATGAGGTGCAAAACTCGGCCGAGTTTGGGGTGGAGATCAAGGGAGAAGT CGGAGTGGACTTTGGCAAGGTGATGAAGAGGATGCGCCGGGTGCGCTCCG ACATCTCCGAGGTGAGAAGGTCTCAGGTTTACGATACCGTGCTGTACCAC GTCTGTTCTTCGTGGTGCTATCTATGCATAGGACTTCGCAAGGGCCTGTT GCCCGTCGTGCCACTGATGTCTTGTGTACAGATGCACGCACGGCAGACAT CTCTACACTCGATGAGGTGCAGTCCTTTTTTTGTCCTTAGAATACGTGGG GATGAGGCCCGTTCATTTTGCATTTCGTGTGTTCGTGTGCGCGATTAACA ATGCCCCGTGGGCGTTCCGTGGGCGCCGGATATACGAGGCACGTCCTGTG CTATTGTTATGCCTTCACGCCAAGAGTGCCTCCCGTCCCTGTTCCCCATG TTTTCGACAAGTTTTTTGTGACAAATTCGAGTCAACATGTCTCCTATCCT CTTGCGATCAAGTCTACCGCTACCTTCGTTCGTTGCTGCTGTTTTGGGTT GACTGCAGCACGACTCCGTCGCCCGCTACTCCCGAGACTTCGTCAAGCAC ATCTTCCTTGGACGGGGAGTGTTTACATCGGCGGACACGATTGAGGTCGC CGGAAAGAAACTCAAGTTCGACAAGGTGTGCTGCCAGCCGTATCATCATA TACGCGGCAGAATTGTCTAGGCTTGGAGCTCTGACAGTACGGGGTTCTTG TTTGCAGAAGATTGTGAAACTTGTTTGTGCTCGAAAGGAGTCGCTCGTGA GCACGTGGGTTTGTAGTTGCAGCATTTGCTCGTGTGTGTGATCACGACTC TTTCTTCATGTCCGTTCTCTTTCCACCACACATTTTTCGACTGGAGACTC GCTGCCTTAAACAAACAGATGCTTGGGCGCCTCGACTAACGGTTCTTCCT CGCGCACGTTCGTTCGGTTGTCGCAACGACACGCGCAGGCCATGGTGGCC ACGGGAGCTTCCGCAGCAGTCCCCCCAGTTCCCGGTCTGAAGGACACGCC TCACCTTACGAACTCCAACTTCTGGAACCTGGAAGAGCTGCCACCGAGGA TGGGCGTGATCGGGGCAGGGCCGATCGGCCTGGAGATGTCCCAAGCAATG CAGCGCTTCGGTTGCAAGGTGTGTGCGGGATTATGAGCCGTTGCCGCCTG AACGGAGAACATGCTCTTTCACGGTTTCAGCTGGCGGTGCCCCCCCCCCC CCCCCCCCCCCCCGCTGGGTGTTTGGGAAATCTCGACCGGTCTCCCTCTC AGTGTTTTTGTTTTCATACCCTTTTATTTNNNNNNNNNNTCCCTCCCCCC CCCCCTCTGGTGGCGTGTTGGCAGAGTCATGACCGTGCTTCCTTCGTGTG CTGCTGATGTCACCGCCTTTTTTTTCACGCTGACGCCTTCTTGCCAACGA AACCTAGGCAGTGGTCTTAAATTGTAGACTACCAGGTGGCTTGGTGCTTG GTGTGGTTCTTGTTGCAAGCGCAATCGTCTTCGCGGGTGGTAGTTTGCCG TTCTTTCGGTTGTGGGATGGGTGACGAAACCGCTAGTACGATGTTGTTGC AAGCATTGCAAACCGAAAGGCTTGACATTGCTCTACTTTTATGAGGGTGT TTGTCCGGGGAAATTCTGTCCAAGTGTAAGTGTCTTTTCAATTCCCCAAC GCCAGAGGTTTGCTTGTTCTCTATTTCTATAATCCTAACAATCAGAAGTT TCTGGTTGCAATCCACGTCAAAAAGTGACCGAGGTGAACTATCTTATTTT TTTCTTCTCGCCACTATCGGCTCATGTTCCAGTTCTTGTGAAATTGGGTT GTCTGTGTGTGCTGCCTGCCGCAGGTGACATGCTTCGAGTATGCCGATCA GCTCTTGCCCAGGGAGGACCCTGATGCGGCCAAGTGCCTGGAGGGAGCGC TACTCGAAGACGGGCTTGACATCAGGCTAGGTGCG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13608:346..3630-

>mRNA_Ecto-sp13_S_contig13608.2854.1 ID=mRNA_Ecto-sp13_S_contig13608.2854.1|Name=mRNA_Ecto-sp13_S_contig13608.2854.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=873bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13608:346..3630- (Ectocarpus species13 EcNAP12_S_4_19m)
GCGGATCTCCTTGGTCCCCTCACGGGCACCAAGGACATGACCCCTGCCAT
CAACATCAGGCCCGGCTCGAAGGACCCGGTTCCCGCCGCCCCGCAGGCGG
AGTTCCTCCCCAAGGATGACTACAACGTCAAGCTCGTGAGCAACGTCGGC
CCTACTGACTACGTCAACCCGGAGCCGCTCGAGAAGTATGACCTGGTGGT
GATTGGCTCAGGTGCAGCGGGATTGCTGAGCGTGATCATTGCGAACGGGC
TGGGCAAGACTTGCGCCCTGGTGGAGCAGCACGCCATGGGCGGCGACTGC
CTGAACGTGGGCTGCGTGCCTTCCAAGGCTCTGATCGCGTGCGCGACCAG
ACTGCATGAGGTGCAAAACTCGGCCGAGTTTGGGGTGGAGATCAAGGGAG
AAGTCGGAGTGGACTTTGGCAAGGTGATGAAGAGGATGCGCCGGGTGCGC
TCCGACATCTCCGAGCACGACTCCGTCGCCCGCTACTCCCGAGACTTCGT
CAAGCACATCTTCCTTGGACGGGGAGTGTTTACATCGGCGGACACGATTG
AGGTCGCCGGAAAGAAACTCAAGTTCGACAAGGCCATGGTGGCCACGGGA
GCTTCCGCAGCAGTCCCCCCAGTTCCCGGTCTGAAGGACACGCCTCACCT
TACGAACTCCAACTTCTGGAACCTGGAAGAGCTGCCACCGAGGATGGGCG
TGATCGGGGCAGGGCCGATCGGCCTGGAGATGTCCCAAGCAATGCAGCGC
TTCGGTTGCAAGGTGACATGCTTCGAGTATGCCGATCAGCTCTTGCCCAG
GGAGGACCCTGATGCGGCCAAGTGCCTGGAGGGAGCGCTACTCGAAGACG
GGCTTGACATCAGGCTAGGTGCG
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