prot_Ecto-sp13_S_contig13603.2851.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13603.2851.1
Unique Nameprot_Ecto-sp13_S_contig13603.2851.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length576
Homology
BLAST of mRNA_Ecto-sp13_S_contig13603.2851.1 vs. uniprot
Match: A0A6H5JIE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIE4_9PHAE)

HSP 1 Score: 701 bits (1810), Expect = 7.750e-244
Identity = 451/571 (78.98%), Postives = 472/571 (82.66%), Query Frame = 0
Query:    1 MTGKRKEERRRPVACFRCRRMLMLTSLFSLVXXXXXXSEPALASSADSGNSNSNSNDVRQPEEMPPADAVDNDPRVDAAGDAASVPGRDSMEDTPRINARSGHVEDAEELGMPTAFATPWVDEGEGEDEGGGSVPLTPADPIASGAVSLAGASVSSSGTTGSQLATQPGAASQVDAVDITQQHDAAAAVAAHSATGPVDVDVDTPSSAATSAADAIQGSELDHNSHQHDTNVLAVGDEGGDSGGGRLGVSTGFDAGREEELPAAEAASAPGVDTAEDRTRNEGEVKDEALRLEGDGGKGAXXXXXXXXXXXXMDELVEETKEAVKGGESLMIDGDYREVARSSDEMGSGATGLDVPAAVVDDSEVADSATADVGGDADAEPTAAAAAALAAEESVE------QRLPPVQPLVSEKEPSLDARSSDTDAVQAKDIGEESLSPAVGDDDAGTDDGDGAANTGVSDFAELPAPDNGTSTASAGRESQSVWTPSGTSSPPESAAAVMGELDEELLKAEGSGGSYSXXXXXXXXXXXXXXXXXXXXGRKADEHCPEEDSEVETETADYSSSRTSGG 565
            MTGKRK++RRR VACFR RR+LMLTSLFSLV    XX EPA ASSADSGNS SNSND RQPEE PPAD VDNDP V+AA D ASVPGRDS+EDT RINARSGHVEDAEELGMPTA AT  VDEGEGED+GGGSV LTPADP+ASGAVSLAGAS S   TTG Q ATQ GAASQ DAV I QQHDAAAAVAAHSATGPVDVD DTPS AATSAADA+QGSELD NSHQHDTNVLAVGDEG  SGGGRLG  TGFDAGRE++LPAAEAASAPGV+TAEDRTRNEGE+KDEALRLEGDGGK A             DELVEET EAVKGGESLM DGDY E A SSDE+ SGATGLD PAAVVDDSEVADSATADVGGDADAEPTAAA                 QR+PPVQPLVSEKEPSLDA SSDT A QAKDIG E+LSPAVGDDD  TD+GDGAA TGVSDFA+LPAPD GTSTASAG E QSV TPSGTSSPP+S AAV   LDEE+LK+EGSGGSY XXXXXXXXXXXXXXXXXXXX     EH P EDSEVETET D+SSSRTSGG
Sbjct:    1 MTGKRKDKRRRTVACFRYRRILMLTSLFSLVVLRCXXXEPAQASSADSGNSRSNSNDARQPEETPPADVVDNDPCVNAADDVASVPGRDSIEDTLRINARSGHVEDAEELGMPTAIATLGVDEGEGEDDGGGSVSLTPADPVASGAVSLAGASASXXXTTGDQQATQAGAASQGDAVVIMQQHDAAAAVAAHSATGPVDVDADTPSFAATSAADAMQGSELDQNSHQHDTNVLAVGDEGCVSGGGRLGGPTGFDAGREKKLPAAEAASAPGVETAEDRTRNEGEIKDEALRLEGDGGKEAGGARDEIDRPGGKDELVEETTEAVKGGESLMTDGDYSEAAHSSDEVESGATGLDDPAAVVDDSEVADSATADVGGDADAEPTAAAXXXXXXXXXXXXXXXXXQRVPPVQPLVSEKEPSLDAHSSDTGAAQAKDIGGEALSPAVGDDDTDTDEGDGAACTGVSDFAKLPAPDTGTSTASAGGEFQSVRTPSGTSSPPKSVAAVADGLDEEVLKSEGSGGSYXXXXXXXXXXXXXXXXXXXXXXXX--EHRPVEDSEVETETGDHSSSRTSGG 569          
BLAST of mRNA_Ecto-sp13_S_contig13603.2851.1 vs. uniprot
Match: D7FHY4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY4_ECTSI)

HSP 1 Score: 490 bits (1261), Expect = 2.870e-163
Identity = 352/572 (61.54%), Postives = 362/572 (63.29%), Query Frame = 0
Query:    1 MTGKRKEERRRPVACFRCRRMLMLTSLFSLVXXXXXXSEPALASSADSGNSNSNSNDVRQPEEMPPADAVDNDPRVDAAGDAASVPGRDSMEDTPRINARSGHVEDAEELGMPTAFATPWVDEGEGEDEGGGSVPLTPADPIASGAVSLAGASVSSSGTTGSQLATQPGAASQVDAVDITQQHDAAAAVAAHSATGPVDVDVDTPSSAATSAADAIQGSELDHNSHQHDTNVLAVGDEGGDSGGGRLGVSTGFDAGREEELPAAEAASAPGVDTAEDRTRNEGEVKDEALRLEGDGGKGAXXXXXXXXXXXXMDELVEETKEAVKGGESLMIDGDYREVARSSDEMGSGATGLDVPAAVVDDSEVADSATADVGGDADAEPTAAAAAALAAEESVEQRLPPVQPLVSEKEPSLDARSSDTDAVQAKDIGEESLSPAVGDDDAGTDDGDGAANTGVSDFAELPAPDNGTSTASAGRESQSVWTPSGTSSPPESAAAVMGELDEELLKAEGSGGSYSXXXXXXXXXXXXXXXXXXXXGRKADEHCPEEDSEVETETADYSSSRTSGGSGGRRDA 572
            MTGK+KE+RRRPVAC R RRMLM TSLF   XXXXXX EPA ASSADSGNSNSNSND RQPEEMPPAD VDNDP VDAAGDAASVPGRDS+ED  RINARSGHVEDAEELGMP+  ATP VDEGEGED+GGGSV LTPADP ASGAVSLAGAS SSSGTTGSQ ATQ GAASQ DAVDI QQHD AAAVAAHSATGPVD+D DTPSS AT AADAIQGSELD NSHQHDTNVLAVGDEGGDSGGGRLGVSTGFDAGRE+ELPAAEA SAPGVDTAEDR RNEGE++DEALRLEGDGGK A            MDELVEETKEA                                                                                                                                                           SV TPSGTSSPPESAAAV  ELDEELLKAEGSGGSYSXXXXXXXXXXXXXXXXXXXX      H PEEDSEVETET D+SSSRTSGGSG RRDA
Sbjct:    1 MTGKKKEKRRRPVACLRYRRMLMRTSLFXXXXXXXXXXEPAQASSADSGNSNSNSNDARQPEEMPPADVVDNDPGVDAAGDAASVPGRDSIEDKSRINARSGHVEDAEELGMPSTVATPGVDEGEGEDDGGGSVSLTPADPAASGAVSLAGASASSSGTTGSQRATQAGAASQEDAVDIMQQHDVAAAVAAHSATGPVDLDADTPSSTATPAADAIQGSELDQNSHQHDTNVLAVGDEGGDSGGGRLGVSTGFDAGREKELPAAEATSAPGVDTAEDRARNEGEIQDEALRLEGDGGKEAGGARDETDRPCGMDELVEETKEA-----------------------------------------------------------------------------------------------------------------------------------------------------------SVRTPSGTSSPPESAAAVADELDEELLKAEGSGGSYSXXXXXXXXXXXXXXXXXXXXX-----HRPEEDSEVETETGDHSSSRTSGGSGXRRDA 412          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13603.2851.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JIE4_9PHAE7.750e-24478.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHY4_ECTSI2.870e-16361.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 38..45
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..45
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 46..576
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 24..37
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..43
score: 0.783
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13603contigEcto-sp13_S_contig13603:1..1728 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13603.2851.1mRNA_Ecto-sp13_S_contig13603.2851.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13603 1..1728 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13603.2851.1 ID=prot_Ecto-sp13_S_contig13603.2851.1|Name=mRNA_Ecto-sp13_S_contig13603.2851.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=576bp
MTGKRKEERRRPVACFRCRRMLMLTSLFSLVVLLCCCSEPALASSADSGN
SNSNSNDVRQPEEMPPADAVDNDPRVDAAGDAASVPGRDSMEDTPRINAR
SGHVEDAEELGMPTAFATPWVDEGEGEDEGGGSVPLTPADPIASGAVSLA
GASVSSSGTTGSQLATQPGAASQVDAVDITQQHDAAAAVAAHSATGPVDV
DVDTPSSAATSAADAIQGSELDHNSHQHDTNVLAVGDEGGDSGGGRLGVS
TGFDAGREEELPAAEAASAPGVDTAEDRTRNEGEVKDEALRLEGDGGKGA
GGATDETDRPDGMDELVEETKEAVKGGESLMIDGDYREVARSSDEMGSGA
TGLDVPAAVVDDSEVADSATADVGGDADAEPTAAAAAALAAEESVEQRLP
PVQPLVSEKEPSLDARSSDTDAVQAKDIGEESLSPAVGDDDAGTDDGDGA
ANTGVSDFAELPAPDNGTSTASAGRESQSVWTPSGTSSPPESAAAVMGEL
DEELLKAEGSGGSYSGGSYSGGGGGGGADDHGVADGRKADEHCPEEDSEV
ETETADYSSSRTSGGSGGRRDAKEYE
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