prot_Ecto-sp13_S_contig13602.2850.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13602.2850.1
Unique Nameprot_Ecto-sp13_S_contig13602.2850.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length226
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig13602.2850.1 vs. uniprot
Match: D7FTA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTA3_ECTSI)

HSP 1 Score: 304 bits (778), Expect = 5.540e-102
Identity = 166/203 (81.77%), Postives = 173/203 (85.22%), Query Frame = 0 
Query:    1 DPQPRNSDTYYNDTVTKLRSVGYANAILFVVSQQERVTPTLIKNYGLLYRALNRLDCVKMFVLRRETSYLLLNKADQEAHESESRRTVNEILDATNLKNFSKMQFFMLTNGSGEEQDKQVKNMREQVKRSPRVEVNATEGLRLTTEVKSDDLDGKGSDDGXXXXXXXXXXXXXXXXXXXXXXSKRNTAAALVPLSVFHRFNSR 203
            +P+PRNSDTYYNDTVTKLRSVGYANAILFVV+Q ERVTPTLIKNYGLLYRALNRLDCVKMFVLRRETSYLLLNK+DQEAHESESRRTVN+ILDATNLKNFSKMQFFMLTNGSGEEQDKQVK MREQVKRSPRVEVNATEGLRLTTEVKSDDLDGKGSDDG                       KRN AAA+VP SVFH  + R
Sbjct:   21 EPKPRNSDTYYNDTVTKLRSVGYANAILFVVTQ-ERVTPTLIKNYGLLYRALNRLDCVKMFVLRRETSYLLLNKSDQEAHESESRRTVNQILDATNLKNFSKMQFFMLTNGSGEEQDKQVKYMREQVKRSPRVEVNATEGLRLTTEVKSDDLDGKGSDDGTIRQHYPHSLYQQRTGKRVLAGRKRNPAAAVVPRSVFHAGSVR 222
[Close]
BLAST of mRNA_Ecto-sp13_S_contig13602.2850.1 vs. uniprot
Match: A0A6H5KNJ1_9PHAE (G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNJ1_9PHAE)

HSP 1 Score: 288 bits (736), Expect = 1.180e-92
Identity = 153/160 (95.62%), Postives = 156/160 (97.50%), Query Frame = 0 
Query:    1 DPQPRNSDTYYNDTVTKLRSVGYANAILFVVSQQERVTPTLIKNYGLLYRALNRLDCVKMFVLRRETSYLLLNKADQEAHESESRRTVNEILDATNLKNFSKMQFFMLTNGSGEEQDKQVKNMREQVKRSPRVEVNATEGLRLTTEVKSDDLDGKGSDDG 160
            DP PRNSDTYYNDTVTKLRSVGYANAILFVV+Q ERVTPTLIKNYGLLYRALNRLDCVKMFVLRRETSYLLLNKADQEAHESESR TVN+ILDATNLKNFSKMQFFMLTNGSGEEQDKQVKNMREQVK SPRVEV+ATEGLRLTTEVKSDDLDGKGSDDG
Sbjct:  237 DPLPRNSDTYYNDTVTKLRSVGYANAILFVVTQ-ERVTPTLIKNYGLLYRALNRLDCVKMFVLRRETSYLLLNKADQEAHESESRSTVNQILDATNLKNFSKMQFFMLTNGSGEEQDKQVKNMREQVKSSPRVEVSATEGLRLTTEVKSDDLDGKGSDDG 395
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13602.2850.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTA3_ECTSI5.540e-10281.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KNJ1_9PHAE1.180e-9295.63G domain-containing protein n=1 Tax=Ectocarpus sp.... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13602contigEcto-sp13_S_contig13602:512..4617 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13602.2850.1mRNA_Ecto-sp13_S_contig13602.2850.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13602 512..4617 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13602.2850.1 ID=prot_Ecto-sp13_S_contig13602.2850.1|Name=mRNA_Ecto-sp13_S_contig13602.2850.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=226bp
DPQPRNSDTYYNDTVTKLRSVGYANAILFVVSQQERVTPTLIKNYGLLYR
ALNRLDCVKMFVLRRETSYLLLNKADQEAHESESRRTVNEILDATNLKNF
SKMQFFMLTNGSGEEQDKQVKNMREQVKRSPRVEVNATEGLRLTTEVKSD
DLDGKGSDDGSSSNSSSNGSRRSSKRMSRKKGSKRNTAAALVPLSVFHRF
NSRESVAEPLDDARDRAPLTACLSW*
back to top