prot_Ecto-sp13_S_contig13587.2840.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13587.2840.1
Unique Nameprot_Ecto-sp13_S_contig13587.2840.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length154
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13587.2840.1 vs. uniprot
Match: A0A6H5K662_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K662_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 7.560e-24
Identity = 49/62 (79.03%), Postives = 55/62 (88.71%), Query Frame = 0 
Query:   92 EWAFLANVDHSQLPPALKNGGLAKALSFPSSPRLGRGGSTPGFVANMTDPIADKGVVSSHGS 153
            EWAF +NVDHSQ PPAL+NGGL +ALS+PSS RL RGGSTPGFVAN  +PIADKGVVSS+GS
Sbjct:  924 EWAFSSNVDHSQQPPALENGGLTRALSYPSSSRLARGGSTPGFVANTANPIADKGVVSSNGS 985
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13587.2840.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K662_9PHAE7.560e-2479.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..153
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13587contigEcto-sp13_S_contig13587:900..1361 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13587.2840.1mRNA_Ecto-sp13_S_contig13587.2840.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13587 781..1413 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13587.2840.1 ID=prot_Ecto-sp13_S_contig13587.2840.1|Name=mRNA_Ecto-sp13_S_contig13587.2840.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=154bp
MEGGNRRSLLLPLQLSLLFARRLRRHWATAPPAAPRARPSSRRPCRFGPR
SRCSSEQPGRRERRGGIEAGPWGHRQRATGNPWGARSRRKREWAFLANVD
HSQLPPALKNGGLAKALSFPSSPRLGRGGSTPGFVANMTDPIADKGVVSS
HGS*
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