mRNA_Ecto-sp13_S_contig1357.2833.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1357.2833.1 vs. uniprot
Match: D8LCS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS7_ECTSI) HSP 1 Score: 919 bits (2375), Expect = 3.250e-314 Identity = 533/631 (84.47%), Postives = 560/631 (88.75%), Query Frame = 3
Query: 915 KGRIAVTNADDALEEALSIRILKPLLNHKDEEICEGFVNLGDTGDKQITLEDPSDITSWWRLKDEGI---KLAYAMWPDGLSEYVLPTLASLGRTFPLENDPTGGLVVLLRLKPDRPERVGKVIDMFCLDQTTAFNGTWKVFLSVPPGAIEHVLTRCCSLGGVQMFWRIRVLVHGGLGDQDEHGIFAAVLESSSADNELTAQIFGDISFSAAWVALSYGMSTVSLMLLDFPGLRWRGSLKCPQQGGTMLLTNTVTRAGDKFLAGSRCQQCSADTRGLGAAAIEHVRMVNVRLDRDVIFRKVKEGFVEPEGQYVFPSPA----VEDLLIRKIDEVAIVVQRGFAETKAGLGEVKGEI*XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETTHESLTHLKDVQAPNYIYPGLVAVDEAGADGTPSGTRGMKSMLYKLRGVGKMDMTLHVLCPVNTTKVPCGYGGTGCRFRATRGWVKKILPV---ALVTAKVALKATLGLDVGLSDLLKDVKDGLVGELVDPTLDEDALLRVVSGEEDVSADVQKDTRAS*EVLKKFMDKEHMDRLRNARDGDGYVDFRERMKRVADGRGGMVWVRNENVQQWTDSGSNAALS 2777
KG IAVTNAD+ALE ALSIRI KPLLNHKDEE EGFVNLGDTGDKQITLEDP DI SWWR K+EG+ +LAY MWPDGLSEYVLPTLASLG TFPLENDPTGGLVVLLRLKPDRPERVGKVI FCLDQT AFN TWK+FL VPPGAIE VLTRCCSLGGVQ+FWR VLVHGGLGD+D +GIFAAVLE SSA+N LTAQIFGD SFSAAWVALSY MS VSLMLLDFPGLRWRGSLKCPQ G T+LLTN VTRAGDKFLAGSRCQQCSADTR LGAAAI+ VRMVNVRLDRDVIFR+VKE FVE EGQYVFPSP EDLLIRKI+EV I V GFAETKAGLGEVKGEI XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TT ESL LK++QAPNY+YPGLVAV+E GADGTPSG RGMKSML+K+RGVGK DMTLH LCPV+ TKVPCGYGG G RFR TRGWVKKI PV ALVTAKVALKAT GLDV LSD LKDVKDGLVGELVDPTLDEDALLR+VSGEEDV AD++KDTRAS E LKKFMDKE MDRL+NARDGDGYVDFR++MKRVADGRGGMVW+RNENVQQWTDS SNAALS
Sbjct: 897 KGGIAVTNADNALEGALSIRIPKPLLNHKDEETYEGFVNLGDTGDKQITLEDPLDIASWWRHKNEGVLEPRLAYCMWPDGLSEYVLPTLASLGLTFPLENDPTGGLVVLLRLKPDRPERVGKVIYTFCLDQTPAFNATWKIFLGVPPGAIEKVLTRCCSLGGVQIFWRNGVLVHGGLGDEDGYGIFAAVLEYSSAENGLTAQIFGDTSFSAAWVALSYVMSAVSLMLLDFPGLRWRGSLKCPQHGDTILLTNKVTRAGDKFLAGSRCQQCSADTRALGAAAIDLVRMVNVRLDRDVIFREVKERFVELEGQYVFPSPVGSSKEEDLLIRKINEVTIAVNGGFAETKAGLGEVKGEIERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTQESLMRLKNLQAPNYLYPGLVAVEETGADGTPSGARGMKSMLHKVRGVGK-DMTLHFLCPVDMTKVPCGYGGKGYRFRETRGWVKKISPVLQVALVTAKVALKATSGLDVDLSDFLKDVKDGLVGELVDPTLDEDALLRIVSGEEDVGADMRKDTRASYEALKKFMDKEQMDRLKNARDGDGYVDFRDKMKRVADGRGGMVWIRNENVQQWTDSRSNAALS 1526
BLAST of mRNA_Ecto-sp13_S_contig1357.2833.1 vs. uniprot
Match: A0A6H5K1K4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K4_9PHAE) HSP 1 Score: 731 bits (1887), Expect = 2.370e-248 Identity = 428/652 (65.64%), Postives = 483/652 (74.08%), Query Frame = 3
Query: 912 RKGRIAVTNADDALEEALSIR----------------------ILKPLLNHKDEEICEGFVNLGDTGDKQITLEDPSDITSWWRLKDEGI---KLAYAMWPDGLSEYVLPTLASLGRTFPLENDPTGGLVVLLRLKPDRPERVGKVIDMFCLDQTTAFNGTWKVFLSVPPGAIEHVLTRCCSLGGVQMFWRIRVLVHGGLGDQDEHGIFAAVLESSSADNELTAQIFGDISFSAAWVALSYGMSTVSLMLLDFPGLRWRGSLKCPQQGGTMLLTNTVTRAGDKFLAGSRCQQCSADTRGLGAAAIEHVRMVNVRLDRDVIFRKVKEGFVEPEGQYVFPSPA----VEDLLIRKIDEVAIVVQRGFAETKAGLGEVKGEI*XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETTHESLTHLKDVQAPNYIYPGLVAVDEAGADGTPSGTRGMKSMLYKLRGVGKMDMTLHVLCPVNTTKVPCGYGGTGCRFRATRGWVKKILPV---ALVTAKVALKATLGLDVGLSDLLKDVKDGLVGELVDPTLDEDALLRVVSGEEDVSADVQKDTRAS*EVLKKFMDKEHMDRLRNARDGDGYVDFRERMKRVADGRGGMVWVRNENVQQWTDSGSNAA 2771
R+G I VTNA +ALE ALS+R ILKPLLNHKD+E +G VNLGDTGD ITL+DPSDITSW RLK EG+ KLAYAMWPDGLSEYVLPTLASLG TFPLENDP GLVVLLRLKP+RPE VGKVID FC T AF+ +WK+FL VPPGA+E VLTRCC LGGV+ FWR VLVHG LG QD FA VLE SS DNELTA+IFGDIS AAWVALSY MS V LML+DFPGLRW+GSLKCPQ G ML + R GDK L GSRC QCS DT GLGAAAI+ VR V++RLDRDVIF VK F + + QY P E LIRKID+VA V+ GFAE + G+ +KGE+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LE+T ESL ++++QAPNY YP LV V E GADGT S G KS+L KLR +GK DMTLH LCPV+ TKVPCGYGG G RF+ TRGWVKKI PV A+VTAKVAL AT GLDV +S+ LKDVKDGLV ELVD T+DE+ALLR VSG++D+ A++Q+DTRAS E LKKFMDKE +DR++NARDGDGY+DFR+ MKRV DGRGGMVWVRN+NVQ+W DS S AA
Sbjct: 330 RRG-ITVTNAKNALEGALSVREFDGSLVRRENFVFLDVVWLARILKPLLNHKDQETFDGRVNLGDTGDTPITLDDPSDITSWDRLKKEGVLEPKLAYAMWPDGLSEYVLPTLASLGLTFPLENDPDEGLVVLLRLKPNRPESVGKVIDTFCSGLTPAFSASWKIFLGVPPGAVEKVLTRCCGLGGVRTFWRYGVLVHGSLGVQDGRRTFAVVLEYSSTDNELTAKIFGDISTPAAWVALSYVMSAVRLMLVDFPGLRWKGSLKCPQHGDAMLFVDMARRGGDKLLEGSRCPQCSVDTGGLGAAAIDLVRFVDIRLDRDVIFNDVKARFDDLDSQYSLSCPTDPSQEEGELIRKIDDVATAVKGGFAEVEGGVSNLKGEM------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVLESTKESLMRIRNLQAPNYRYPRLVVVKEVGADGTASKAHGKKSVLSKLRRLGKKDMTLHFLCPVDMTKVPCGYGGEGYRFQETRGWVKKISPVLQVAVVTAKVALNATTGLDVDISNFLKDVKDGLVNELVDRTIDEEALLRAVSGDDDIGAELQRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFRDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAA 962
BLAST of mRNA_Ecto-sp13_S_contig1357.2833.1 vs. uniprot
Match: D7FUC3_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC3_ECTSI) HSP 1 Score: 725 bits (1872), Expect = 2.040e-242 Identity = 442/675 (65.48%), Postives = 494/675 (73.19%), Query Frame = 3
Query: 924 IAVTNADDALEEALSIR----------------------ILKPLLNHKDEEICEGFVNLGDTGDKQITLEDPSDITSWWRLKDEGI---KLAYAMWPDGLSEYVLPTLASLGRTFPLENDPTGGLVVLLRLKPDRPERVGKVIDMFCLDQTTAFNGTWKVFLSVPPGAIEHVLTRCCSLGGVQMFWRIRVLVHGGLGDQDEHGIFAAVLESSSADNELTAQIFGDISFSAAWVALSYGMSTVSLMLLDFPGLRWRGSLKCPQQGGTMLLTNTVTRAGDKFLAGSRCQQCSADTRGLGAAAIEHVRMVNVRLDRDVIFRKVKEGFVEPEGQYVFPSPAV----EDLLIRKIDEVAIVVQRGFAETK-------AGLGEVKGEI*XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------LETTHESLTHLKDVQAPNYIYPGLVAVDEAGADGTPSGTRGMKSMLYKLRGVGKMDMTLHVLCPVNTTKVPCGYGGTGCRFRATRGWVKKILPV---ALVTAKVALKATLGLDVGLSDLLKDVKDGLVGELVDPTLDEDALLRVVSGEEDVSADVQKDTRAS*EVLKKFMDKEHMDRLRNARDGDGYVDFRERMKRVADGRGGMVWVRNENVQQWTDSGSNAALS 2777
I VT+A +ALE ALSIR ILKPLLNHKDEE +G VNLGDTGD ++TLEDP DI SW+RLK+EG+ +LA A+WPDGLSE+VLPTLASLG TFPLENDP GLVVLLR KPD PE VGKVID FC + AF+ +WK+FL VPPGAIE VLTRCC+LGGV+ FWR V VHGG G Q H +FA VLE SSA+NELTA+IFGDIS W+ALSY MS VSLM+ DFPGLR RGSLKCPQ G MLL V R GDKFL GSRC QCSADTRGLGAAAI+ VRMV++RLDRD IF +VKE FV+ EG+Y F SPA E+LLI+KID VAI V GF E K AGLG+VKG I XXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX + T E L LK++QAPNY+YP LVAV+E + TPS GMK +L KLRGVGK +M LH LCPV+ TKVPCGYGG G RFR TRGWVKKI PV A+VTAKVAL AT GL+V +S+ LKDVKDGL ELVD +LDEDALLRVVSGEEDV AD+Q DTRAS E LKK MDKE + RL+NARDGDGY+DFR++MKRV DGRGGMVWVRNENVQ+W DS SN A S
Sbjct: 570 ITVTSAKNALEGALSIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEESFDGLVNLGDTGDTRVTLEDPLDIVSWFRLKNEGVIEPRLACALWPDGLSEHVLPTLASLGLTFPLENDPAEGLVVLLRQKPDCPESVGKVIDTFCSEHIPAFSASWKIFLGVPPGAIEKVLTRCCNLGGVRTFWRSAVFVHGGHGYQGGHEMFAVVLEYSSANNELTAKIFGDISTPTPWMALSYVMSAVSLMMRDFPGLRSRGSLKCPQHGDAMLLATKVPRPGDKFLEGSRCPQCSADTRGLGAAAIDLVRMVDIRLDRDEIFHEVKERFVDLEGRYSFSSPAGSSKGENLLIQKIDGVAIAVHGGFNEMKGEANGIRAGLGDVKGXIRGGFHEMXXXXXXXXXXXXXXXEDTKAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGRLENVFKNTQEILMRLKNLQAPNYLYPRLVAVEEVASGSTPSRAHGMKRVLSKLRGVGKKEMVLHFLCPVDMTKVPCGYGGEGYRFRETRGWVKKISPVLQVAVVTAKVALNATAGLNVNISEFLKDVKDGLADELVDRSLDEDALLRVVSGEEDVDADMQNDTRASYEALKKLMDKEQVGRLKNARDGDGYIDFRDKMKRVPDGRGGMVWVRNENVQRWLDSHSNTAPS 1244
BLAST of mRNA_Ecto-sp13_S_contig1357.2833.1 vs. uniprot
Match: A0A6H5K516_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K516_9PHAE) HSP 1 Score: 701 bits (1808), Expect = 7.560e-239 Identity = 384/652 (58.90%), Postives = 444/652 (68.10%), Query Frame = 3
Query: 912 RKGRIAVTNADDALEEALSIR----------------------ILKPLLNHKDEEICEGFVNLGDTGDKQITLEDPSDITSWWRLKDEGI---KLAYAMWPDGLSEYVLPTLASLGRTFPLENDPTGGLVVLLRLKPDRPERVGKVIDMFCLDQTTAFNGTWKVFLSVPPGAIEHVLTRCCSLGGVQMFWRIRVLVHGGLGDQDEHGIFAAVLESSSADNELTAQIFGDISFSAAWVALSYGMSTVSLMLLDFPGLRWRGSLKCPQQGGTMLLTNTVTRAGDKFLAGSRCQQCSADTRGLGAAAIEHVRMVNVRLDRDVIFRKVKEGFVEPEGQYVFPSPA----VEDLLIRKIDEVAIVVQRGFAETKAGLGEVKGEI*XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETTHESLTHLKDVQAPNYIYPGLVAVDEAGADGTPSGTRGMKSMLYKLRGVGKMDMTLHVLCPVNTTKVPCGYGGTGCRFRATRGWVKKILPV---ALVTAKVALKATLGLDVGLSDLLKDVKDGLVGELVDPTLDEDALLRVVSGEEDVSADVQKDTRAS*EVLKKFMDKEHMDRLRNARDGDGYVDFRERMKRVADGRGGMVWVRNENVQQWTDSGSNAA 2771
R+G I VTNA +ALE +LS+R ILKPLLNHKD+E +G VNLGDTGD ITL+DPSDI SW RLK EG+ +LAYAMWPDGLSEYVLPTLASLG TFPLENDP GLVVLLRL P+RPE VGKVID FC T AF+ +WK+FL VPPGA+E VLTRCC LG V+ FWR VLVHG G QD FA VLE SS DNELTA+IFGDIS AAWVALSY MS V LML+DFPGLRW+GSLKCP+ G ML + R GDK L GSRC QCS DT GLGAAAI+ VR V++RLDRDVIF++VK F + + QY P E LIRKID+VA V+ E K G + + LE+T ESL ++++QAPNY YP LV V E G+DGT S G KS+L KLR +GK DMTLH LCPV+ TKVPCGYGG G RF+ TRGWVKKI PV A+VTA+VAL AT GLDV +S+ L+DVKDGLV ELVD TLDE+ALLR VSG++D+ A++Q+DTRAS E LKKFMDKE +DR++NARDGDGY+DFR+ MKRV DGRGGMVWVRN+NVQ+W DS S AA
Sbjct: 191 RRG-ITVTNAKNALEGSLSVREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQETFDGRVNLGDTGDTPITLDDPSDIKSWDRLKKEGVLEPRLAYAMWPDGLSEYVLPTLASLGFTFPLENDPDEGLVVLLRLTPNRPESVGKVIDTFCSGLTPAFSASWKIFLGVPPGAVEKVLTRCCGLGVVRTFWRYGVLVHGSFGAQDGRRTFAVVLEYSSTDNELTAKIFGDISTPAAWVALSYVMSAVKLMLMDFPGLRWKGSLKCPEHGDAMLFVDKARRGGDKLLEGSRCPQCSVDTGGLGAAAIDLVRFVDIRLDRDVIFKEVKARFDDLDSQYSLSCPTDPSQEEGELIRKIDDVARAVRSVKKEMKDGFIMISERL-----------------------------------------------DKVLESTQESLMRIRNLQAPNYRYPRLVVVKEVGSDGTASKAHGKKSVLSKLRRLGKKDMTLHFLCPVDMTKVPCGYGGEGYRFQETRGWVKKISPVLQVAVVTARVALNATTGLDVNISNFLQDVKDGLVNELVDRTLDEEALLRAVSGDDDIGAELQRDTRASYEALKKFMDKEQVDRVKNARDGDGYIDFRDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAA 794
BLAST of mRNA_Ecto-sp13_S_contig1357.2833.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI) HSP 1 Score: 711 bits (1834), Expect = 7.510e-237 Identity = 392/650 (60.31%), Postives = 451/650 (69.38%), Query Frame = 3
Query: 924 IAVTNADDALEEALSIR----------------------ILKPLLNHKDEEICEGFVNLGDTGDKQITLEDPSDITSWWRLKDEGI---KLAYAMWPDGLSEYVLPTLASLGRTFPLENDPTGGLVVLLRLKPDRPERVGKVIDMFCLDQTTAFNGTWKVFLSVPPGAIEHVLTRCCSLGGVQMFWRIRVLVHGGLGDQDEHGIFAAVLESSSADNELTAQIFGDISFSAAWVALSYGMSTVSLMLLDFPGLRWRGSLKCPQQGGTMLLTNTVTRAGDKFLAGSRCQQCSADTRGLGAAAIEHVRMVNVRLDRDVIFRKVKEGFVEPEGQYVFPSPAV----EDLLIRKIDEVAIVVQRGFAETKAGLGEVKGEI*XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETTHESLTHLKDVQAPNYIYPGLVAVDEAGADGTPSGTRGMKSMLYKLRGVGKMDMTLHVLCPVNTTKVPCGYGGTGCRFRATRGWVKKILPV---ALVTAKVALKATLGLDVGLSDLLKDVKDGLVGELVDPTLDEDALLRVVSGEEDVSADVQKDTRAS*EVLKKFMDKEHMDRLRNARDGDGYVDFRERMKRVADGRGGMVWVRNENVQQWTDSGSNAALS 2777
I VTNAD+ALE AL+IR ILKPLLNHKDEE +G VNLGDTGD ++TLEDPSDI SW RLK+EG+ +LA +WP+GLSEYV+PT+ASLG TFPLENDP GGLVVLLRL+ DRPE VGKVID FCLDQT A +WK+FL VP GAIE VLTRCCSLGGVQ FWR VLVHGG+G+QD GIFA VLE S +DNELTAQIFGDIS A WVALSY +S VSLMLLDFPGLR RGSLKCPQ G M L N VTR GDK L GSRC+QCS DTRGLGAAAI+ VRMV++RLDRDVIFR+VK FV+ EGQY F S E +L++K++EVA ++ GF + K L +V L++T ESL L+ +QAPNY YP LVA++E + GT + RGMK +L KLRGVG +MTLH LCPV+ TKVPCGY G G RFR TR WVKK+ PV A+VTAKVA+KAT GLDV LSD LKDV DGLV ELVD LDED L RVVSGEEDV D+QK TRAS E L + M K ++R ++ARDGDGYVDFRE M+R++DGRGG VWVRNENVQ+W DS S+AA S
Sbjct: 642 ITVTNADNALEGALAIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDTRVTLEDPSDIASWGRLKNEGVLEPRLARKLWPNGLSEYVIPTIASLGLTFPLENDPAGGLVVLLRLEHDRPELVGKVIDTFCLDQTPALRASWKIFLGVPAGAIEKVLTRCCSLGGVQTFWRSGVLVHGGVGEQDRSGIFAVVLEYSPSDNELTAQIFGDISTPAPWVALSYVVSAVSLMLLDFPGLRSRGSLKCPQHGDAMPLANMVTRTGDKILEGSRCRQCSPDTRGLGAAAIDLVRMVDIRLDRDVIFREVKARFVDLEGQYSFSSSTASSNDEGVLVQKMEEVARTLKDGFDDLKGRLSKV------------------------------------------------------LDSTQESLMRLQTLQAPNYPYPRLVAIEEIASGGTLTRARGMKRVLSKLRGVGTKEMTLHFLCPVDMTKVPCGYDGDGYRFRETRRWVKKLSPVLQVAMVTAKVAIKATSGLDVDLSDFLKDVNDGLVDELVDRMLDEDELRRVVSGEEDVGTDMQKQTRASYEALTELMGK--LERRKDARDGDGYVDFRENMQRLSDGRGGEVWVRNENVQKWLDSHSSAAPS 1235
BLAST of mRNA_Ecto-sp13_S_contig1357.2833.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI) HSP 1 Score: 701 bits (1808), Expect = 3.220e-234 Identity = 390/654 (59.63%), Postives = 452/654 (69.11%), Query Frame = 3
Query: 912 RKGRIAVTNADDALEEALSIR----------------------ILKPLLNHKDEEICEGFVNLGDTGDKQITLEDPSDITSWWRLKDEGI---KLAYAMWPDGLSEYVLPTLASLGRTFPLENDPTGGLVVLLRLKPDRPERVGKVIDMFCLDQTTAFNGTWKVFLSVPPGAIEHVLTRCCSLGGVQMFWRIRVLVHGGLGDQDEHGIFAAVLESSSADNELTAQIFGDISFSAAWVALSYGMSTVSLMLLDFPGLRWRGSLKCPQQGGTMLLTNTVTRAGDKFLAGSRCQQCSADTRGLGAAAIEHVRMVNVRLDRDVIFRKVKEGFVEPEGQYVFPSPAV----EDLLIRKIDEVAIVVQRGFAETKAGLGEVKGEI*XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETTHESLTHLKDVQAPNYIYPGLVAVDEAGADGTPSGTRGMKSMLYKLRGVGKMDMTLHVLCPVNTTKVPCGYGGTGCRFRATRGWVKKILPV---ALVTAKVALKATLGLDVGLSDLLKDVKDGLVGELVDPTLDEDALLRVVSGEEDVSADVQKDTRAS*EVLKKFMDKEHMDRLRNARDGDGYVDFRERMKRVADGRGGMVWVRNENVQQWTDSGSNAALS 2777
R+G + VTNA +ALE ALSIR ILKPLLNHKDEE +G VNLGDTGD ++TLEDP DI SW RLK++G+ +LA MWP+GLS+YVLPTLASLG TFPL+NDP GGLVVLLRL PDRPERVGKVID FCLDQT AF+ +WK+FL VP GAIE VLTRCCSLGGVQ FWR VLVHGGLGD+D H IFA VLE SS+DNELTAQIFGDIS A WVALSY +S V LMLLDFPGLR RGSLKCPQ G MLL N +T+AG K L S C QCS DTRGLGAAAI+ V MV++RLDRDVIFR VK+ FVE E QY F S A ED+LI+K++EVA ++ G + K LG+V L++T ESL LK++QA NY YP LVAV+E + GTPS G+ +L KLRGVG +M LH LCPV+ TKVPCGYGG G RFR R WVKK+ PV A+VTAKVALKAT GLDV LS+ LKDV+DG V ELVD TLDED LLRVV GEED +++K+TRAS E L+ FM K ++R ++ARDGDGYVDFR+ M+R++DGRGG VWVRNENV++W DS SNA S
Sbjct: 539 RRG-VNVTNAKNALEGALSIREFDGSLVRHEMFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDTRVTLEDPLDIASWGRLKNQGVLEPRLARTMWPNGLSKYVLPTLASLGLTFPLKNDPAGGLVVLLRLNPDRPERVGKVIDTFCLDQTPAFSTSWKIFLGVPAGAIEKVLTRCCSLGGVQTFWRSGVLVHGGLGDEDGHEIFAVVLEYSSSDNELTAQIFGDISTPAPWVALSYVISAVRLMLLDFPGLRSRGSLKCPQHGDAMLLVNKMTQAGVKLLEPSGCPQCSPDTRGLGAAAIDLVSMVDIRLDRDVIFRDVKQRFVELESQYSFSSSAASSNDEDVLIQKMEEVARTLKDGLDDLKGRLGKV------------------------------------------------------LDSTQESLMRLKNLQAANYPYPRLVAVEEIASGGTPSKAHGINRVLNKLRGVGTKEMVLHFLCPVDMTKVPCGYGGEGYRFREARRWVKKLSPVLQVAVVTAKVALKATSGLDVDLSNFLKDVQDGFVDELVDQTLDEDTLLRVVLGEEDAGFNMRKETRASYEALRGFMGK--LERRKDARDGDGYVDFRDNMQRLSDGRGGEVWVRNENVERWLDSHSNAVPS 1135
BLAST of mRNA_Ecto-sp13_S_contig1357.2833.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI) HSP 1 Score: 700 bits (1806), Expect = 9.350e-232 Identity = 427/668 (63.92%), Postives = 480/668 (71.86%), Query Frame = 3
Query: 912 RKGRIAVTNADDALEEALSIR----------------------ILKPLLNHKDEEICEGFVNLGDTGDKQITLEDPSDITSWWRLKDEGI---KLAYAMWPDGLSEYVLPTLASLGRTFPLENDPTGGLVVLLRLKPDRPERVGKVIDMFCLDQTTAFNGTWKVFLSVPPGAIEHVLTRCCSLGGVQMFWRIRVLVHGGLGDQDEHGIFAAVLESSSADNELTAQIFGDISFSAAWVALSYGMSTVSLMLLDFPGLRWRGSLKCPQQGGTMLLTNTVTRAGDKFLAGSRCQQCSADTRGLGAAAIEHVRMVNVRLDRDVIFRKVKEGFVEPEGQYVFPSPA-----VEDLLIRKIDEVAIVVQRGFAETKA---------------GLGEVKGEI*XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETTHESLTHLKDVQAPNYIYPGLVAVDEAGADGTPSGTRGMKSMLYKLRGVGKMDMTLHVLCPVNTTKVPCGYGGTGCRFRATRGWVKKILPV---ALVTAKVALKATLGLDVGLSDLLKDVKDGLVGELVDPTLDEDALLRVVSGEEDVSADVQKDTRAS*EVLKKFMDKEHMDRLRNARDGDGYVDFRERMKRVADGRGGMVWVRNENVQQWTDSGSNAA 2771
R+G I VTNA++ALE ALSIR ILKPLLNHKD+E+ +G VNLGDTGD +ITL+D +DI SW RLK EG+ +LAYA+WP+GLSEYVLPTLASLG FPLENDP GLVVLLRLKP RPE VGKVID FC T AF +WK+FL VPPGAIE VLTRCC LGGVQ FWR VLVHGGLG QDE FA V+E SS DNEL AQIFGD+S W A SY MS VSLML+DFPGL W+G L+CPQ G ML N TR GDKFL GSRC QCSADT GLGAAAI+ +R V++RLDRDVIF +VK F + E QY F P E LIRKID +A VQ F E K EV+G + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LE+T ESL L+D+QAPNY YP LV V E G+DGT S RG KSML KL GVGK DMTL LCPV+ T+VPCGYGG G RF+ TR WVKKI PV A+VTAKVAL AT GL V +SD LKDVKDGLV ELVD TLD++ALLR V G++++ AD+Q+DTRAS E LKKFMDKE ++R++N RDGDGY+DFR+ MKRV DGRGGMVWVRNENVQ+W DS S AA
Sbjct: 643 RRG-ITVTNAENALEGALSIREFDGSLVPHEKFVFLDVVWLARILKPLLNHKDQEMFDGRVNLGDTGDTRITLDDSADIASWDRLKKEGVLEPRLAYAIWPNGLSEYVLPTLASLGLIFPLENDPAEGLVVLLRLKPHRPESVGKVIDTFCSGLTPAFRASWKIFLGVPPGAIEKVLTRCCGLGGVQTFWRYGVLVHGGLGVQDERRTFAVVVEYSSTDNELIAQIFGDVSTPGPWGATSYVMSAVSLMLVDFPGLGWKGYLECPQHGDGMLFVNKATRDGDKFLEGSRCPQCSADTGGLGAAAIDLLRFVDIRLDRDVIFNEVKARFNDLESQYSFTCPTHDRSKEESELIRKIDGMATAVQGAFNEVKVEXXXXXXXXXXXXXXXFAEVEGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLGMISGRLDKVLESTQESLMRLRDLQAPNYRYPRLVVVKEVGSDGTASKARGRKSMLSKLCGVGKKDMTLQFLCPVDMTQVPCGYGGEGYRFKETRSWVKKISPVLQVAVVTAKVALNATTGLHVDISDFLKDVKDGLVEELVDRTLDDEALLRAVLGDDNIGADLQRDTRASYEALKKFMDKEQIERVKNTRDGDGYIDFRDEMKRVPDGRGGMVWVRNENVQKWLDSRSIAA 1309
BLAST of mRNA_Ecto-sp13_S_contig1357.2833.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI) HSP 1 Score: 652 bits (1683), Expect = 7.410e-217 Identity = 389/653 (59.57%), Postives = 440/653 (67.38%), Query Frame = 3
Query: 915 KGRIAVTNADDALEEALSIR----------------------ILKPLLNHKDEEICEGFVNLGDTGDKQITLEDPSDITSWWRLKDEGI---KLAYAMWPDGLSEYVLPTLASLGRTFPLENDPTGGLVVLLRLKPDRPERVGKVIDMFCLDQTTAFNGTWKVFLSVPPGAIEHVLTRCCSLGGVQMFWRIRVLVHGGLGDQDEHGIFAAVLESSSADNELTAQIFGDISFSAAWVALSYGMSTVSLMLLDFPGLRWRGSLKCPQQGGTMLLTNTVTRAGDKFLAGSRCQQCSADTRGLGAAAIEHVRMVNVRLDRDVIFRKVKEGFVEPEGQYVFPSPAV----EDLLIRKIDEVAIVVQRGFAETKAGLGEVKGEI*XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETTHESLTHLKDVQAPNYIYPGLVAVDEAGADGTPSGTRGMKSMLYKLRGVGKMDMTLHVLCPVNTTKVPCGYGGTGCRFRATRGWVKKILP---VALVTAKVALKATLGLDVGLSDLLKDVKDGLVGELVDPTLDEDALLRVVSGEEDVSADVQKDTRAS*EVLKKFMDKEHMDRLRNARDGDGYVDFRERMKRVADGRGGMVWVRNENVQQWTDSGSNAALS 2777
K I VTNA++ALE ALSIR ILKPLLNHKD+ +G VNLGDTGD +ITL+D SDI SW RLK+EG+ +LAYAMWPDGLSEYVLPTLASLG TFPLE DP GLVVLLRL+P+RP VG+ ID FC T AF+ +W++FL VPPGAIE VLTRCC LG VQ FWR VLVHGGLGD D GIFA V E SS +NELTAQIFGDIS SA WVALSY S VSLML+DFPGLRW GSLKCPQ G M V AGDKFL RC +CS TRGLGAAAI+ +RMV++RLDR VI R+VK F E QY F PA ED +RK+DEV K E XXXXXXXXXXXXXXXXX LE+T ESL LK++QAPNY YP LV V E G+ GT S G KSML KLRG+GK DM LH LCPV+ T VPCGYGG G +F+ TR WVK++ P V +VTAKVAL A GL+V +SD LKDVKDGLV ELVD TLDEDALLR VSG++ V AD+Q+DTRAS E LK FM+ E R +NARDGDGY++FRE MKR+ DGRGG VWVRNENV++W S S+ A S
Sbjct: 425 KRGIVVTNAENALEGALSIREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQRTFDGRVNLGDTGDARITLDDSSDIASWGRLKNEGVLEPRLAYAMWPDGLSEYVLPTLASLGLTFPLEGDPDNGLVVLLRLEPNRPASVGEAIDTFCSKYTPAFSASWEIFLGVPPGAIEKVLTRCCGLGDVQTFWRYGVLVHGGLGDLDGRGIFAVVTEYSSTNNELTAQIFGDISTSAPWVALSYVTSAVSLMLMDFPGLRWNGSLKCPQHGYEMPFATKVNCAGDKFLE-RRCPRCSPQTRGLGAAAIDLIRMVDIRLDRGVIDREVKARFDVLESQY-FTCPAGSSTDEDEFVRKMDEV------------------KAEX--------------------------XXXXXXXXXXXXXXXXXAGRLDKVLESTQESLARLKNLQAPNYHYPRLVVVKEVGSHGTSSKAHGKKSMLSKLRGLGKKDMRLHFLCPVDMTTVPCGYGGEGYQFQETRAWVKRVSPALQVTVVTAKVALNAVTGLNVDISDFLKDVKDGLVEELVDRTLDEDALLRAVSGDDTVGADLQRDTRASYEALKVFMENEERRRRKNARDGDGYIEFREEMKRLPDGRGGEVWVRNENVRKWLASNSSPAPS 1031
BLAST of mRNA_Ecto-sp13_S_contig1357.2833.1 vs. uniprot
Match: D7G431_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G431_ECTSI) HSP 1 Score: 647 bits (1668), Expect = 7.260e-214 Identity = 395/654 (60.40%), Postives = 462/654 (70.64%), Query Frame = 3
Query: 912 RKGRIAVTNADDALEEALSIR----------------------ILKPLLNHKDEEICEGFVNLGDTGDKQITLEDPSDITSWWRLKDEGI---KLAYAMWPDGLSEYVLPTLASLGRTFPLENDPTGGLVVLLRLKPDRPERVGKVIDMFCLDQTTAFNGTWKVFLSVPPGAIEHVLTRCCSLGGVQMFWRIRVLVHGGLGDQDEHGIFAAVLESSSADNELTAQIFGDISFSAAWVALSYGMSTVSLMLLDFPGLRWRGSLKCPQQGGTMLLTNTVTRAGDKFLAGSRCQQCSADTRGLGAAAIEHVRMVNVRLDRDVIFRKVKEGFVEPEGQYVFPSPA----VEDLLIRKIDEVAIVVQRGFAETKAGLGE-------VKGEI*XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETTHESLTHLKDVQAPNYIYPGLVAVDEAGADGTPSGTRGMKSMLYKLRGVGKMDMTLHVLCPVNTTKVPCGYGGTGCRFRATRGWVKKILPV---ALVTAKVALKATLGLDVGLSDLLKDVKDGLVGELVDPTLDEDALLRVVSGEEDVSADVQKDTRAS*EVLKKFMDKEHMDRLRNARDGDGYVDFRERMKRVADGRGGMVWVRNENVQQWTDS 2756
R+G I VTNA +ALE ALSIR ILKPLLNHKD+E +G VNLGDTGD +ITL+DP I SW RLK+EG+ +LAYAMWP GLSEYVLPTLASLG TFPLE D G VVLLRLKP+RP+ VG+VID FC T A + +W +FL VPPGAIE VLTRCC LG VQ FWR VLVHGGLGD GIFA VLE SS D++L QIFGDI A WVALSY MS VSLML+DFPGLRW G+LKCPQ G ML+ N VT+AG+ FL RC +CS +T+GLGAAAI+ +RMV++R+DR IF +V E F +G Y F A +D L R ++ + ++ G + V+GE+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LE+T ESL LK++QAPNY+YP LV V E G+ GT S G KSML KLRG+ K DMTLH LCPV+ T+VPCGYGG G RF+ TRGWV+KI PV A+VTAKVAL AT GL+V SD LKDV+DGLVGELVD TLDE AL RVV+GEE + AD+Q+ TRAS E LKKFMDKE + R ++A+DGDGYV FR+ MKRVADG+GGMVWVRN+NVQ+W +S
Sbjct: 445 RRG-IIVTNAKNALEGALSIREFDGSLVRHETFVFLDVLWLARILKPLLNHKDQETFDGRVNLGDTGDARITLDDPLYIASWGRLKNEGVLEPRLAYAMWPGGLSEYVLPTLASLGLTFPLEGDLDEGQVVLLRLKPERPDSVGEVIDTFCSRHTPALSASWNIFLGVPPGAIEKVLTRCCGLGAVQTFWRYGVLVHGGLGDLGGRGIFAVVLEYSSTDHKLNGQIFGDIGTPAPWVALSYVMSAVSLMLVDFPGLRWGGALKCPQHGDAMLMANKVTQAGETFLK-RRCPRCSTETKGLGAAAIDLLRMVDIRMDRGEIFDEVMERFDALKGHYSFDGQAGSSKKKDGLTRMVESIIKTMKGGVDDXXXXXXXXXXXXXXVQGEV-----------RRGFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLESTQESLMRLKNLQAPNYLYPRLVVVKEVGSGGTSSKAHGKKSMLTKLRGLAKKDMTLHFLCPVDMTRVPCGYGGEGHRFKQTRGWVRKISPVLQVAVVTAKVALNATTGLNVDPSDFLKDVRDGLVGELVDRTLDEHALRRVVTGEEAIGADMQRGTRASYEALKKFMDKEEIKRCKDAKDGDGYVHFRDEMKRVADGKGGMVWVRNKNVQKWLES 1085
BLAST of mRNA_Ecto-sp13_S_contig1357.2833.1 vs. uniprot
Match: A0A6H5JYD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD1_9PHAE) HSP 1 Score: 630 bits (1624), Expect = 5.460e-212 Identity = 373/706 (52.83%), Postives = 434/706 (61.47%), Query Frame = 3
Query: 915 KGRIAVTNADDALEEALSIR----------------------ILKPLLNHKDEEICEGFVNLGDTGDKQITLEDPSDITSWWRLKDEGI---KLAYAMWPDGLSEYVLPTLASLGRTFPLENDPTGGLVVLLRLKPDRPERVGKVIDMFCLDQTTAFNGTWKVFLSVPPGAIEHVLTRCCSLGGVQMFWRIRVLVHGGLGD-QDEHGIFAAVLESSSADNELTAQIFGDISFSAAWVALSYGMSTVSLMLLDFPGLRWRGSLKCPQQGGTMLLTNTVTRA---------------------------GDKFLAGSR-CQQCSADTRGLGAAAIEHVRMVNVRLDRDVIFRKVKEGFVEPEGQYVFPSPAVEDL-------------------LIRKIDEVAI-----------VVQRGFAETKAGLGEVKGEI*XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETTHESLTHLKDVQAPNYIYPGLVAVDEAGADGTPSGTRGMKSMLYKLRGVGKMDMTLHVLCPVNTTKVPCGYGGTGCRFRATRGWVKKILPV---ALVTAKVALKATLGLDVGLSDLLKDVKDGLVGELVDPTLDEDALLRVVSGEEDVSADVQKDTRAS*EVLKKFMDKEHMDRLRNARDGDGYVDFRERMKRVADGRGGMVWVRNENVQQWTDSGSNAA 2771
K I V NA+ ALE ALSIR ILKPLLNHKD+E EGFV LGD GD ITL D DI SW RLK EGI +LA+ +WP GLSEYVLPTL SLG TFPLEND GGLVVLLRLKP RP RVGKVID FC F+ +WK+FL VP GA+E VLTRCCS+GGVQ FWR VLVHG GD +D G FA VLE SS +NELTAQI+GD S A W ALSY +S+V +LL+FPGLRWRG LKCPQ G MLL + V R GD+ L S C+QCS RG GAAAI+ +RMV++RL+RDV+F +VK F+E E + P+ +V L LIRK+D+VA VV+ GF +T L VK E+ LE+T ESL ++ +QAPNY YP LV V E G+DGT S G KS+L KLR +GK DMTLH LCPV+ TKVPCGYGG G RF+ TRGWVKKI PV A+VTAKVAL AT GLDV +S+ LKDVKDGLV ELVD TLDE ALLR VSG++D+ A++Q DTRAS E LKKFMD+E +DR++NARDGDGY+D R+ MKRV DGRGGMVWVRN+NVQ+W DS S AA
Sbjct: 69 KREITVANAEHALEGALSIREFDGSLIRHETFVFLDVVWLSRILKPLLNHKDQETFEGFVKLGDNGDSCITLHDQVDIASWRRLKSEGILEPRLAHVIWPAGLSEYVLPTLVSLGLTFPLENDDAGGLVVLLRLKPGRPARVGKVIDTFCSQNIPVFSASWKIFLGVPAGAMEKVLTRCCSIGGVQTFWRFGVLVHGSFGDARDGSGDFAVVLEYSSINNELTAQIYGDKSQPAPWAALSYVISSVRFVLLEFPGLRWRGLLKCPQHGDPMLLDSEVYRRSHSGTLPVLKFPLEALNFEIYDRTILQGDQLLLESAGCRQCSPKIRGQGAAAIKLLRMVDIRLERDVVFDEVKARFLECEHIFSRPTLSVAVLCLSSRHVCTKQDPSQEQGELIRKMDDVATAVEVGISNLEGVVKGGFHDTNTELRGVKKEV------------------------------------KDGFSMISGRLDKVLESTQESLMRIRHLQAPNYRYPRLVVVKEVGSDGTASKAHGKKSLLSKLRLLGKKDMTLHFLCPVDMTKVPCGYGGEGYRFQETRGWVKKISPVLQVAVVTAKVALNATTGLDVDISNFLKDVKDGLVNELVDRTLDE-ALLRAVSGDDDIGAELQTDTRASYEALKKFMDQEQVDRVKNARDGDGYIDLRDEMKRVTDGRGGMVWVRNDNVQKWLDSHSIAA 737 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1357.2833.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1357.2833.1 >prot_Ecto-sp13_S_contig1357.2833.1 ID=prot_Ecto-sp13_S_contig1357.2833.1|Name=mRNA_Ecto-sp13_S_contig1357.2833.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=338bp MKANEATPTGEWKKESTVFADVQPMELEGSSVRVYDCAGQVMLFIYLDVEback to top mRNA from alignment at Ecto-sp13_S_contig1357:8488..16455- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1357.2833.1 ID=mRNA_Ecto-sp13_S_contig1357.2833.1|Name=mRNA_Ecto-sp13_S_contig1357.2833.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7968bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1357:8488..16455- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1357:8488..16455- >mRNA_Ecto-sp13_S_contig1357.2833.1 ID=mRNA_Ecto-sp13_S_contig1357.2833.1|Name=mRNA_Ecto-sp13_S_contig1357.2833.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1014bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1357:8488..16455- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |