prot_Ecto-sp13_S_contig13540.2811.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig13540.2811.1
Unique Name	prot_Ecto-sp13_S_contig13540.2811.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	396

Homology

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BLAST of mRNA_Ecto-sp13_S_contig13540.2811.1 vs. uniprot
Match: D7FMK9_ECTSI (UV excision repair protein RAD23B homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMK9_ECTSI)

HSP 1 Score: 540 bits (1391), Expect = 7.420e-189
Identity = 356/395 (90.13%), Postives = 362/395 (91.65%), Query Frame = 0

Query:    1 MVTKPKXXXXXXXXXXXXXXXXXXTSGAAPAAAPXXXXXXXXXXADHVRQLTEMGFPEDQVTAALRAAMGNPDIAVEFLMTGIPDNIQAAAAPTQAGAAPTGAMETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPIDESAPPAAAAGNVXXXXXXXXXXXXXXXXXNPAQVAQLLQSMSPAQRAQMAAAMGXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMGGMPPGAGGAGGNVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMGGGMPPAFQAPAPVAAPPTAANPATPVXXPTASSDSTAPSPIESPADPSPATGESSPTNPSADGNNPQGGGDEDEDMYG 395
            MVTKP XXXXXXXXXXXXXXXXXXT+ AAPAAAP XXXXXXXX ADHVRQLTEMGFPEDQVTAALRAAMGNPD+AVEFLMTGIPDNIQAAAAP QA AAPTGAMETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPI+ESAPPAAAAGN XXXXX            NPAQVAQLLQ MSPAQRAQMAAAM XXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMGG+PPGAGGAGGNVIRLSEEEGAAVARLTELGF+RTDAAQAYLACDKNEALAANFLLNDMG GMPPAFQAPAPV APPTAA PAT  XX    SDSTAPS  E+PADPSPATGESSPTNPSA GNNPQGGGDEDEDMYG
Sbjct:   72 MVTKPXXXXXXXXXXXXXXXXXXXTAAAAPAAAPAXXXXXXXXNADHVRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIPDNIQAAAAPAQAAAAPTGAMETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPINESAPPAAAAGNAXXXXXFGPMMGSGGQANNPAQVAQLLQGMSPAQRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMGGIPPGAGGAGGNVIRLSEEEGAAVARLTELGFERTDAAQAYLACDKNEALAANFLLNDMGAGMPPAFQAPAPVPAPPTAATPATXXXXXXXXSDSTAPSATENPADPSPATGESSPTNPSAGGNNPQGGGDEDEDMYG 466

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BLAST of mRNA_Ecto-sp13_S_contig13540.2811.1 vs. uniprot
Match: A0A6H5KA00_9PHAE (UBA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA00_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 4.010e-67
Identity = 112/122 (91.80%), Postives = 113/122 (92.62%), Query Frame = 0

Query:   54 MGFPEDQVTAALRAAMGNPDIAVEFLMTGIPDNIQAAAAPTQAGAAPTGAMETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPIDESAPPAAAAGN 175
            MGFPEDQVTAALRAAMGNPD+AVEFLMTGIPDNIQ       AGAAPTGAMETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPIDESA PAA AGN
Sbjct:    1 MGFPEDQVTAALRAAMGNPDVAVEFLMTGIPDNIQ-------AGAAPTGAMETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPIDESATPAAVAGN 115

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BLAST of mRNA_Ecto-sp13_S_contig13540.2811.1 vs. uniprot
Match: A0A1Z5KBW7_FISSO (UV excision repair protein RAD23 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBW7_FISSO)

HSP 1 Score: 210 bits (534), Expect = 3.260e-60
Identity = 129/276 (46.74%), Postives = 161/276 (58.33%), Query Frame = 0

Query:   48 VRQLTEMGFPEDQVTAALRAAMGNPDIAVEFLMTGIPDNIQAAAAPTQAGAA-PTGAMETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPIDESAPPAAAAGN---VXXXXXXXXXXXXXXXXXNPAQVAQLLQSMSPAQRAQMAAAMGXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMGGMPPGAGGAGGNVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMGGG 319
            V  LT MGFPE +V   LRAA GNPD+AVEFL  GIPD + AA   T++ +A P  A + L+  R HPQFNEL+RLVQ +P  L  +L  IG+Q P LL  I+ +Q  F+ +MNEP+  +AP +A  G+                     NPAQ+AQ++QSMSPA+  QMA  MG                  EQ QQ M  M  G     G GG           V+RL+EEE AAV RLTE+GFDR++AAQA+LACDKNEALAAN L++ MG G
Sbjct:  137 VDNLTAMGFPEAEVRHCLRAAQGNPDVAVEFLTNGIPDAVSAAMNATESSSATPAQATQPLQALRNHPQFNELRRLVQSNPQMLQQVLAQIGQQQPELLEEINSHQALFLEMMNEPVT-AAPSSAPTGSRAPTASSESASGMGMPMEGMGNPAQMAQMIQSMSPAELDQMAQMMGLSSDQLRMTAQMLGQMPPEQLQQFMAHMGGG----EGHGGQ---------QVLRLTEEEMAAVDRLTEMGFDRSEAAQAFLACDKNEALAANLLMDSMGDG 398

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BLAST of mRNA_Ecto-sp13_S_contig13540.2811.1 vs. uniprot
Match: A0A6G0WDE9_9STRA (UV excision repair protein RAD23 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WDE9_9STRA)

HSP 1 Score: 207 bits (526), Expect = 3.060e-59
Identity = 139/276 (50.36%), Postives = 171/276 (61.96%), Query Frame = 0

Query:   46 DHVRQLTEMGFPEDQVTAALRAAMGNPDIAVEFLMTGIPDNIQAAAAPTQAGAAPTGAM---ETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPIDESAPPAAAAGNVXXXXXXXXXXXXXXXXXNPAQVAQLLQSMSPAQRAQMAAAMGXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMGGMPPGAGGAGGNVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMGG 318
            D +RQL +MGFPE+QV  AL+AA  NPD AVE+LM GIP+  Q AA P  A AA +G +    +LE  R HPQF+ L+RL+Q +P  L ++LQ IG QSP LL  IH NQ +F+ ++NEPI ESA PAA A                    +P Q+ QL+ S+SP Q+A MAA MG       XXXXXXXXXXX    Q+M +M AGG  GA      P         I L+EEE AAV RL ++GFDR +  QAYLACDKNEALAANFL++ M G
Sbjct:  138 DTIRQLCDMGFPEEQVRVALQAAFNNPDRAVEYLMNGIPE--QPAAPPASAPAAASGGLGAPNSLEALRSHPQFDALRRLIQSNPAALPTVLQQIGSQSPELLRLIHANQEEFVRMLNEPIAESAAPAAGAS--------PFGDADAGGMPSPQQLQQLMASLSPQQQAAMAAQMGMTPDQLQXXXXXXXXXXXXXXAQMMQNMQAGGGVGA------P-------TRIHLTEEEAAAVGRLCDMGFDRNEVIQAYLACDKNEALAANFLMDSMSG 390

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BLAST of mRNA_Ecto-sp13_S_contig13540.2811.1 vs. uniprot
Match: A0A225X0I0_9STRA (UV excision repair protein RAD23 n=13 Tax=Phytophthora TaxID=4783 RepID=A0A225X0I0_9STRA)

HSP 1 Score: 207 bits (528), Expect = 5.290e-59
Identity = 136/291 (46.74%), Postives = 168/291 (57.73%), Query Frame = 0

Query:   48 VRQLTEMGFPEDQVTAALRAAMGNPDIAVEFLMTGIPDNIQA---AAAPTQAGAAPTGAM----------ETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPI---DESAPPAAAAGNVXXXXXXXXXXXXXXXXXNPAQVAQLLQSMSPAQRAQMAAAMGXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMGGMPPGAG-GAGGNVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLN--DMGGG 319
            V+QL +MGFPEDQV +ALRAA  NP+ AVE+LMTGIP+   A    AAP+  G A   A            TLE  R HPQF+ L++LVQ +P  L ++LQ IG QSP LL  IH+NQ  F+ ++NEPI   D  A P+ A                      P Q+ QL+ S++P Q+AQMAA MG                     +Q+M SM  GG    G+ G+  GAG GA G+ I LSEEE AAV RL E+GF+RTD  QAYLACDKNEALAANFL++  D GGG
Sbjct:  162 VQQLVDMGFPEDQVRSALRAAFNNPERAVEYLMTGIPEQAVAPAQTAAPSAEGGAGASAATATAVTGDEANTLEALRNHPQFDALRQLVQSNPAALPAVLQQIGAQSPELLRLIHQNQDRFVQMLNEPIGTRDAGATPSGAGA-----APFDLGMGGGGAMPTPQQIQQLVDSLTPEQQAQMAAQMGMTPEQLRGLSQMLSNLPPGAMEQMMASMGGGG----GLEGLGGGAGAGADGHRIMLSEEEAAAVDRLCEMGFERTDVIQAYLACDKNEALAANFLMDSGDFGGG 443

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BLAST of mRNA_Ecto-sp13_S_contig13540.2811.1 vs. uniprot
Match: D0MVR9_PHYIT (UV excision repair protein RAD23 n=6 Tax=Phytophthora infestans TaxID=4787 RepID=D0MVR9_PHYIT)

HSP 1 Score: 206 bits (523), Expect = 2.270e-58
Identity = 132/283 (46.64%), Postives = 167/283 (59.01%), Query Frame = 0

Query:   48 VRQLTEMGFPEDQVTAALRAAMGNPDIAVEFLMTGIPDNIQAAAAPTQAGAAPTGAM-------ETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPID-ESAPPAAAAGNVXXXXXXXXXXXXXXXXXNPAQVAQLLQSMSPAQRAQMAAAMGXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMGGMPPGAGGAGGNVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLN---DMGGG 319
            V+QL +MGFPEDQV +ALRAA  NP+ AVE+LMTGIP+    AAAP Q     +GA         +LE  R HPQF+ L++LVQ +P  L ++LQ IG QSP LL  IH+NQ  F+ ++NEPI    A  A ++G+                   P Q+ QL+ S++P Q+AQMAA MG                     +Q+M SM  GG    G+GG      GAGG+ I LSEEE AAV RL E+GF+RTD  QAYLACDKNEALAANFL++   + GGG
Sbjct:  156 VQQLVDMGFPEDQVRSALRAAFNNPERAVEYLMTGIPEQ---AAAPAQTAVPSSGASAGSDDVANSLEALRNHPQFDALRQLVQSNPAALPAVLQQIGAQSPELLRLIHQNQDRFVQMLNEPIGTREAGSAPSSGSGAGAAPFDLGMGGNGAMPTPQQIQQLVDSLTPEQQAQMAAQMGMSPEQLRGLSQMLSNLPPGAMEQMMASMG-GGAGLEGIGGXXXX--GAGGHRIMLSEEEAAAVDRLCEMGFERTDVIQAYLACDKNEALAANFLMDSGDNFGGG 432

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BLAST of mRNA_Ecto-sp13_S_contig13540.2811.1 vs. uniprot
Match: A0A7S4DGQ1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGQ1_HETAK)

HSP 1 Score: 205 bits (522), Expect = 3.260e-58
Identity = 149/289 (51.56%), Postives = 181/289 (62.63%), Query Frame = 0

Query:   48 VRQLTEMGFPEDQVTAALRAAMGNPDIAVEFLMTGIPD----NIQAAAAPTQAGAAPTGAMETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPIDESAPPAAAAGNVXXXXXXXXXXXXXXXXX------NPAQVAQLLQ--SMSPAQRAQMAAAMGXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMG-------GMPPGAGGAGGNVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMG 317
            V+QL +MGFPEDQV AALRAAMGN D+AVEFLM GIP+    N  AA A +   AA TG    L+  R HPQ N LKRLVQ +P  L  +LQ IG QSP LLA IH NQ +F+ +MNEP+DESAP A      XXXXXXXXXXXXXXXXX      NPA +A+++Q  S+  AQRAQ+A ++G                  EQ QQ+M          AGMG       G+PPGA       IRL+++E  AV RL ++GF+R +  QAYLACDKNEA+AAN L++ MG
Sbjct:  140 VQQLVDMGFPEDQVKAALRAAMGNGDVAVEFLMNGIPEGLPTNPAAAGASSGGAAASTGTGHPLDALRRHPQLNALKRLVQSNPGALQQVLQQIGAQSPELLATIHANQEEFVRMMNEPVDESAPAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPAIMARMMQLASLPEAQRAQVAQSLGIPADQLNQFVNLMRMMPPEQLQQIMA---------AGMGXXXXXXXGLPPGA-----TTIRLTQDEADAVNRLCDMGFNRNNVMQAYLACDKNEAMAANLLMDGMG 414

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BLAST of mRNA_Ecto-sp13_S_contig13540.2811.1 vs. uniprot
Match: A0A024TCU4_9STRA (UV excision repair protein RAD23 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TCU4_9STRA)

HSP 1 Score: 199 bits (507), Expect = 2.100e-56
Identity = 125/276 (45.29%), Postives = 158/276 (57.25%), Query Frame = 0

Query:   48 VRQLTEMGFPEDQVTAALRAAMGNPDIAVEFLMTGIPDNIQAAAAPTQAGAAP-TGAMETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPIDESAPPAAAAGNVXXXXXXXXXXXXXXXXXNPAQVAQLLQSMSPAQRAQMAAAMGXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMGGMPPGAGGAGGNV----IRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMGG 318
            VRQL +MGFPEDQV AAL+AA  NP+ AVE+LM GIP+   A  A T A A+   GA  +LE  R HPQF+ L+R++Q +P+ L ++LQ IG Q+P LL  IH+NQ  F+A++NEPI E+A P+A                       P Q+ QL+ S+SP Q+A MAA MG                  E   QLM  M                AGG GG+     I L+EEE AAV RL ++GFDR +  QAYLACDKNEALAANFL++ M G
Sbjct:  141 VRQLVDMGFPEDQVRAALQAAFHNPERAVEYLMNGIPEQPAAPPASTTAPASGGLGAPTSLEALRHHPQFDALRRMIQANPSALPTVLQQIGAQNPQLLQLIHQNQEQFVAMLNEPIAEAATPSATPS----VPASPFGDSGADGMPTPQQLQQLMASLSPQQQAAMAAQMGMTYEQLQQFTQMLNTMPPEAMAQLMQQM----------------AGGEGGHGAPTRIHLTEEEAAAVGRLVDMGFDRNEVIQAYLACDKNEALAANFLMDSMSG 396

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BLAST of mRNA_Ecto-sp13_S_contig13540.2811.1 vs. uniprot
Match: A0A3M6VGI6_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VGI6_9STRA)

HSP 1 Score: 200 bits (509), Expect = 3.340e-56
Identity = 132/290 (45.52%), Postives = 165/290 (56.90%), Query Frame = 0

Query:   48 VRQLTEMGFPEDQVTAALRAAMGNPDIAVEFLMTGIPDNIQAAAAPTQAGAAPTGA-------------METLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPID--ESAPPAAAAGNVXXXXXXXXXXXXXXXXXNPAQVAQLLQSMSPAQRAQMAAAMGXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMGGMPPGAGGAGGNVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLND---MGGG 319
            V+QL +MGFPEDQV +ALRAA  NP+ AVE+LMTGIPD +   AAP Q  A   GA               TLE  R HPQF+ L++LVQ +P  L ++LQ IG QSP LL  IH+NQ  F+ ++NEPI   E+   +++AG         XXX        P Q+ QL+ S++P Q+ QMAA MG                     +Q+M SM  GG+ G G            G+ I LSEEE AAV RL E+GF+RTD  QAYLACDKNEALAANFL++     GGG
Sbjct:  161 VQQLVDMGFPEDQVRSALRAAFNNPERAVEYLMTGIPDQV---AAPLQTAATLAGAGAVAGIGGGGDETTNTLEALRNHPQFDALRQLVQSNPAALPAVLQQIGAQSPELLRLIHQNQDRFVQMLNEPIGTRETGSASSSAGAAPFDLGMGXXXGMP----TPQQIQQLVDSLTPEQQTQMAAQMGMSPEQLRGLSQMLSNLPPGAMEQMMTSMGGGGLEGLGGXXXXXXXXXXXGHRIMLSEEEAAAVDRLCEMGFERTDVIQAYLACDKNEALAANFLMDSGDSFGGG 443

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BLAST of mRNA_Ecto-sp13_S_contig13540.2811.1 vs. uniprot
Match: A0A485KDA0_9STRA (Aste57867_4066 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDA0_9STRA)

HSP 1 Score: 199 bits (506), Expect = 3.950e-56
Identity = 136/278 (48.92%), Postives = 165/278 (59.35%), Query Frame = 0

Query:   46 DHVRQLTEMGFPEDQVTAALRAAMGNPDIAVEFLMTGIPDNIQAAAAPTQAGAAPT-----GAMETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPIDESAPPAAAAGNVXXXXXXXXXXXXXXXXXNPAQVAQLLQSMSPAQRAQMAAAMGXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMGGMPPGAGGAGGNVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMGG 318
            D +RQL +MGFPE+QV  AL+AA  NPD AVE+LM GIP+   A  A              GA  +LE  R HPQF+ L+RL+Q +P  L ++LQ IG QSP LL  IH+NQ  F+A++NEPI ESA PA                        P Q+ QL+ S+SP Q+A MAA MG    XXXXXXXXXXXXXXE   Q+M  M  GG    G+G             I L+EEE AAV RL ++GFDR +  QAYLACDKNEALAANFL++ M G
Sbjct:  143 DTIRQLCDMGFPEEQVRLALQAAFNNPDRAVEYLMNGIPERPAAPPASXXXXXXXXXXXVFGAPNSLEALRNHPQFDALRRLIQSNPAALPTVLQQIGSQSPELLRLIHQNQEQFVAMLNEPIAESAAPAGGV------PASPFGDADAGGMPTPQQLQQLMASLSPQQQAAMAAQMGMTPDXXXXXXXXXXXXXXEAMAQIMQQMQGGGAAAGGLGAP---------TRIHLTEEEAAAVGRLCDMGFDRNEVIQAYLACDKNEALAANFLMDSMSG 405

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig13540.2811.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig13540.2811.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FMK9_ECTSI	7.420e-189	90.13	UV excision repair protein RAD23B homolog n=1 Tax=...	[more]
A0A6H5KA00_9PHAE	4.010e-67	91.80	UBA domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A1Z5KBW7_FISSO	3.260e-60	46.74	UV excision repair protein RAD23 n=2 Tax=Fistulife...	[more]
A0A6G0WDE9_9STRA	3.060e-59	50.36	UV excision repair protein RAD23 n=1 Tax=Aphanomyc...	[more]
A0A225X0I0_9STRA	5.290e-59	46.74	UV excision repair protein RAD23 n=13 Tax=Phytopht...	[more]
D0MVR9_PHYIT	2.270e-58	46.64	UV excision repair protein RAD23 n=6 Tax=Phytophth...	[more]
A0A7S4DGQ1_HETAK	3.260e-58	51.56	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A024TCU4_9STRA	2.100e-56	45.29	UV excision repair protein RAD23 n=2 Tax=Aphanomyc...	[more]
A0A3M6VGI6_9STRA	3.340e-56	45.52	Uncharacterized protein n=1 Tax=Peronospora effusa...	[more]
A0A485KDA0_9STRA	3.950e-56	48.92	Aste57867_4066 protein n=1 Tax=Aphanomyces stellat...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015940	Ubiquitin-associated domain	SMART	SM00165	uba_6	coord: 44..81 e-value: 2.3E-7 score: 40.5 coord: 277..314 e-value: 5.7E-5 score: 32.5
IPR015940	Ubiquitin-associated domain	PFAM	PF00627	UBA	coord: 43..79 e-value: 6.6E-11 score: 41.9 coord: 279..312 e-value: 1.9E-8 score: 34.0
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 272..315 score: 13.149
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 42..82 score: 13.969
None	No IPR available	GENE3D	1.10.8.10		coord: 267..315 e-value: 1.5E-18 score: 68.6
None	No IPR available	GENE3D	1.10.8.10		coord: 42..85 e-value: 3.9E-16 score: 60.6
None	No IPR available	PANTHER	PTHR10621	UV EXCISION REPAIR PROTEIN RAD23	coord: 3..161 coord: 193..313
None	No IPR available	PANTHER	PTHR10621:SF0	AT15685P-RELATED	coord: 3..161 coord: 193..313
IPR036353	XPC-binding domain superfamily	GENE3D	1.10.10.540		coord: 96..162 e-value: 7.8E-18 score: 65.8
IPR036353	XPC-binding domain superfamily	SUPERFAMILY	101238	XPC-binding domain	coord: 105..168
IPR015360	XPC-binding domain	PFAM	PF09280	XPC-binding	coord: 107..162 e-value: 5.8E-18 score: 64.4
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 30..85
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 260..316

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig13540	contig	Ecto-sp13_S_contig13540:412..4625 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig13540.2811.1	mRNA_Ecto-sp13_S_contig13540.2811.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig13540 2..4696 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig13540.2811.1 ID=prot_Ecto-sp13_S_contig13540.2811.1|Name=mRNA_Ecto-sp13_S_contig13540.2811.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=396bp
MVTKPKPAAAAPAAPAPAPSPAPATSGAAPAAAPAAPAAPAAPNADHVRQ
LTEMGFPEDQVTAALRAAMGNPDIAVEFLMTGIPDNIQAAAAPTQAGAAP
TGAMETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHE
NQGDFIALMNEPIDESAPPAAAAGNVGNMGGFGSMMGSGGQANNPAQVAQ
LLQSMSPAQRAQMAAAMGMSPQQLAQVSQVIGQMPQEQFQQLMGSMNAGG
MPGAGMGGMPPGAGGAGGNVIRLSEEEGAAVARLTELGFDRTDAAQAYLA
CDKNEALAANFLLNDMGGGMPPAFQAPAPVAAPPTAANPATPVPAPTASS
DSTAPSPIESPADPSPATGESSPTNPSADGNNPQGGGDEDEDMYG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015940	UBA
IPR036353	XPC-bd_sf
IPR015360	XPC-bd
IPR009060	UBA-like_sf