mRNA_Ecto-sp13_S_contig13540.2811.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13540.2811.1 vs. uniprot
Match: D7FMK9_ECTSI (UV excision repair protein RAD23B homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMK9_ECTSI) HSP 1 Score: 588 bits (1517), Expect = 2.130e-205 Identity = 380/418 (90.91%), Postives = 386/418 (92.34%), Query Frame = 3
Query: 3 GQILKDECTLAEYKIKEEEFLVCMVTKPXXXXXXXXXXXXXXXXXXXTSGAAPAAAPXXXXXXXXXXADHVRQLTEMGFPEDQVTAALRAAMGNPDIAVEFLMTGIPDNIQAAAAPTQAGAAPTGAMETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPIDESAPPAAAAGNVXXXXXXXXXXXXXXXXXNPAQVAQLLQSMSPAQRAQMAAAMGXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMGGMPPGAGGAGGNVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMGGGMPPAFQAPAPVAAPPTAANPATPVXXPTASSDSTAPSPIESPADPSPATGESSPTNPSADGNNPQGGGDEDEDMYG 1256
GQILKDECTLAEYKIKEEEFLVCMVTKPXXXXXXXXXXXXXXXXXXXT+ AAPAAAP XXXXXXXX ADHVRQLTEMGFPEDQVTAALRAAMGNPD+AVEFLMTGIPDNIQAAAAP QA AAPTGAMETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPI+ESAPPAAAAGN XXXXX NPAQVAQLLQ MSPAQRAQMAAAM XXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMGG+PPGAGGAGGNVIRLSEEEGAAVARLTELGF+RTDAAQAYLACDKNEALAANFLLNDMG GMPPAFQAPAPV APPTAA PAT XX SDSTAPS E+PADPSPATGESSPTNPSA GNNPQGGGDEDEDMYG
Sbjct: 49 GQILKDECTLAEYKIKEEEFLVCMVTKPXXXXXXXXXXXXXXXXXXXTAAAAPAAAPAXXXXXXXXNADHVRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIPDNIQAAAAPAQAAAAPTGAMETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPINESAPPAAAAGNAXXXXXFGPMMGSGGQANNPAQVAQLLQGMSPAQRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMGGIPPGAGGAGGNVIRLSEEEGAAVARLTELGFERTDAAQAYLACDKNEALAANFLLNDMGAGMPPAFQAPAPVPAPPTAATPATXXXXXXXXSDSTAPSATENPADPSPATGESSPTNPSAGGNNPQGGGDEDEDMYG 466
BLAST of mRNA_Ecto-sp13_S_contig13540.2811.1 vs. uniprot
Match: A0A6H5KA00_9PHAE (UBA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA00_9PHAE) HSP 1 Score: 218 bits (554), Expect = 2.470e-65 Identity = 112/122 (91.80%), Postives = 113/122 (92.62%), Query Frame = 3
Query: 231 MGFPEDQVTAALRAAMGNPDIAVEFLMTGIPDNIQAAAAPTQAGAAPTGAMETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPIDESAPPAAAAGN 596
MGFPEDQVTAALRAAMGNPD+AVEFLMTGIPDNIQ AGAAPTGAMETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPIDESA PAA AGN
Sbjct: 1 MGFPEDQVTAALRAAMGNPDVAVEFLMTGIPDNIQ-------AGAAPTGAMETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPIDESATPAAVAGN 115
BLAST of mRNA_Ecto-sp13_S_contig13540.2811.1 vs. uniprot
Match: A0A6G0WDE9_9STRA (UV excision repair protein RAD23 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WDE9_9STRA) HSP 1 Score: 222 bits (566), Expect = 2.400e-63 Identity = 165/368 (44.84%), Postives = 200/368 (54.35%), Query Frame = 3
Query: 3 GQILKDECTLAEYKIKEEEFLVCMVTKPXXXXXXXXXXXXXXXXXXXTSG------------------------AAPAAAPXXXXXXXXXXADHVRQLTEMGFPEDQVTAALRAAMGNPDIAVEFLMTGIPDNIQAAAAPTQAGAAPTGAM---ETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPIDESAPPAAAAGNVXXXXXXXXXXXXXXXXXNPAQVAQLLQSMSPAQRAQMAAAMGXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMGGMPPGAGGAGGNVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMGG 1025
G++LKDE LAEY IKE +FLV MVTKP XX A PAA D +RQL +MGFPE+QV AL+AA NPD AVE+LM GIP+ Q AA P A AA +G + +LE R HPQF+ L+RL+Q +P L ++LQ IG QSP LL IH NQ +F+ ++NEPI ESA PAA A +P Q+ QL+ S+SP Q+A MAA MG XXXXXXXXXXX Q+M +M AGG GA P I L+EEE AAV RL ++GFDR + QAYLACDKNEALAANFL++ M G
Sbjct: 47 GKVLKDESKLAEYNIKENDFLVVMVTKPKVVRKPPTEPTPAPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPAAGAEGLVVGEALN-DTIRQLCDMGFPEEQVRVALQAAFNNPDRAVEYLMNGIPE--QPAAPPASAPAAASGGLGAPNSLEALRSHPQFDALRRLIQSNPAALPTVLQQIGSQSPELLRLIHANQEEFVRMLNEPIAESAAPAAGAS--------PFGDADAGGMPSPQQLQQLMASLSPQQQAAMAAQMGMTPDQLQXXXXXXXXXXXXXXAQMMQNMQAGGGVGA------P-------TRIHLTEEEAAAVGRLCDMGFDRNEVIQAYLACDKNEALAANFLMDSMSG 390
BLAST of mRNA_Ecto-sp13_S_contig13540.2811.1 vs. uniprot
Match: A0A024TCU4_9STRA (UV excision repair protein RAD23 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TCU4_9STRA) HSP 1 Score: 211 bits (538), Expect = 3.160e-59 Identity = 149/371 (40.16%), Postives = 191/371 (51.48%), Query Frame = 3
Query: 3 GQILKDECTLAEYKIKEEEFLVCMVTKPXXXXXXXXXXXXXXXXXXXTSG-------------------------AAPAAAPXXXXXXXXXXADHVRQLTEMGFPEDQVTAALRAAMGNPDIAVEFLMTGIPDNIQAAAAPTQAGAAP-TGAMETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPIDESAPPAAAAGNVXXXXXXXXXXXXXXXXXNPAQVAQLLQSMSPAQRAQMAAAMGXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMGGMPPGAGGAGGNV----IRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMGG 1025
G++LKD+ L+EY +KE +FLV MVTKP XXXX + PAA ++ VRQL +MGFPEDQV AAL+AA NP+ AVE+LM GIP+ A A T A A+ GA +LE R HPQF+ L+R++Q +P+ L ++LQ IG Q+P LL IH+NQ F+A++NEPI E+A P+A P Q+ QL+ S+SP Q+A MAA MG E QLM M AGG GG+ I L+EEE AAV RL ++GFDR + QAYLACDKNEALAANFL++ M G
Sbjct: 47 GKVLKDDSKLSEYNVKENDFLVVMVTKPKVVRKTAADPAPPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTPAAG-APGIVVGEALSETVRQLVDMGFPEDQVRAALQAAFHNPERAVEYLMNGIPEQPAAPPASTTAPASGGLGAPTSLEALRHHPQFDALRRMIQANPSALPTVLQQIGAQNPQLLQLIHQNQEQFVAMLNEPIAEAATPSATPS----VPASPFGDSGADGMPTPQQLQQLMASLSPQQQAAMAAQMGMTYEQLQQFTQMLNTMPPEAMAQLMQQM----------------AGGEGGHGAPTRIHLTEEEAAAVGRLVDMGFDRNEVIQAYLACDKNEALAANFLMDSMSG 396
BLAST of mRNA_Ecto-sp13_S_contig13540.2811.1 vs. uniprot
Match: A0A485KDA0_9STRA (Aste57867_4066 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDA0_9STRA) HSP 1 Score: 211 bits (538), Expect = 4.290e-59 Identity = 168/374 (44.92%), Postives = 201/374 (53.74%), Query Frame = 3
Query: 3 GQILKDECTLAEYKIKEEEFLVCMVTKPXXXXXXXXXXXXXXXXXXXTSG-------------------------AAPAAAPXXXXXXXXXXA---DHVRQLTEMGFPEDQVTAALRAAMGNPDIAVEFLMTGIPDNIQAAAAPTQAGAAPT-----GAMETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPIDESAPPAAAAGNVXXXXXXXXXXXXXXXXXNPAQVAQLLQSMSPAQRAQMAAAMGXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMGGMPPGAGGAGGNVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMGG 1025
G++LKDE L+EY IKE +FLV MVTKP XXXXXXXXX AA A P D +RQL +MGFPE+QV AL+AA NPD AVE+LM GIP+ A A GA +LE R HPQF+ L+RL+Q +P L ++LQ IG QSP LL IH+NQ F+A++NEPI ESA PA P Q+ QL+ S+SP Q+A MAA MG XXXXXXXXXXXXXXE Q+M M GG G+G I L+EEE AAV RL ++GFDR + QAYLACDKNEALAANFL++ M G
Sbjct: 47 GKVLKDESKLSEYNIKENDFLVVMVTKPKVVRKTATEPXXXXXXXXXXXXXXXXAATAXXXXXXXXXXXXXXXXXAATATTPAVGAAGLVVGEALNDTIRQLCDMGFPEEQVRLALQAAFNNPDRAVEYLMNGIPERPAAPPASXXXXXXXXXXXVFGAPNSLEALRNHPQFDALRRLIQSNPAALPTVLQQIGSQSPELLRLIHQNQEQFVAMLNEPIAESAAPAGGV------PASPFGDADAGGMPTPQQLQQLMASLSPQQQAAMAAQMGMTPDXXXXXXXXXXXXXXEAMAQIMQQMQGGGAAAGGLGAP---------TRIHLTEEEAAAVGRLCDMGFDRNEVIQAYLACDKNEALAANFLMDSMSG 405
BLAST of mRNA_Ecto-sp13_S_contig13540.2811.1 vs. uniprot
Match: A0A425DPI3_9STRA (UV excision repair protein RAD23 (Fragment) n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425DPI3_9STRA) HSP 1 Score: 210 bits (534), Expect = 7.370e-59 Identity = 156/371 (42.05%), Postives = 195/371 (52.56%), Query Frame = 3
Query: 3 GQILKDECTLAEYKIKEEEFLVCMVTKPXXXXXXXXXXXXXXXXXXXTSG--------------------------AAPAAAPXXXXXXXXXXADHVRQLTEMGFPEDQVTAALRAAMGNPDIAVEFLMTGIPDNIQAAAAPTQAGAAPT----GAMETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPIDESAPPAAAAGNVXXXXXXXXXXXXXXXXXNPAQVAQLLQSMSPAQRAQMAAAMGXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMGGMPPGAGGAGGNVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMGG 1025
G++LKDE LAEY +KE +FLV MVTKP XXXXXXXXXX AA A+ + +RQL +MGFPE+QV AL+AA NPD AVE+LM GIP+ + AA PT + A P GA +LE R HPQF+ L+R++Q +P L ++LQ IG Q+P LL IH+NQ F+ ++NEPI ESA P A G+V P Q+ QL+ S+SP Q+A MAA MG E QLM M G G G P I L+EEE AAV RL ++GF+R + QAYLACDKNEALAANFL++ M G
Sbjct: 18 GKVLKDEGKLAEYNVKENDFLVVMVTKPKVVRKPAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATPASGAPGLVVGEQLSGTIRQLVDMGFPEEQVRLALQAAFNNPDRAVEYLMNGIPE--RQAAPPTSSSAVPPSGSLGAPTSLEALRQHPQFDALRRMIQSNPAALPTVLQQIGSQNPQLLQLIHQNQEQFVNMLNEPIVESAAPPAG-GSVPASPFGDSGADGMP---TPQQLQQLMASLSPQQQAAMAAQMGMTYEQLQQFTQMLNTMPPEAMAQLMQQMTGG----EGGHGAP--------TRIHLTEEEAAAVGRLVDMGFERNEVIQAYLACDKNEALAANFLMDSMSG 370
BLAST of mRNA_Ecto-sp13_S_contig13540.2811.1 vs. uniprot
Match: D0MVR9_PHYIT (UV excision repair protein RAD23 n=6 Tax=Phytophthora infestans TaxID=4787 RepID=D0MVR9_PHYIT) HSP 1 Score: 211 bits (538), Expect = 7.970e-59 Identity = 167/392 (42.60%), Postives = 210/392 (53.57%), Query Frame = 3
Query: 3 GQILKDECTLAEYKIKEEEFLVCMVTKPXXXXXXXXXXXXXXXXXXXTSGAAP---------------------------------------AAAPXXXXXXXXXXADHVRQLTEMGFPEDQVTAALRAAMGNPDIAVEFLMTGIPDNIQAAAAPTQAGAAPTGAM-------ETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPID-ESAPPAAAAGNVXXXXXXXXXXXXXXXXXNPAQVAQLLQSMSPAQRAQMAAAMGXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMGGMPPGAGGAGGNVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLN---DMGGG 1028
G++LKD+ TLAEY +KE +FLV MVTKP XXXXXXXXXXXXXXXX ++ + V+QL +MGFPEDQV +ALRAA NP+ AVE+LMTGIP+ AAAP Q +GA +LE R HPQF+ L++LVQ +P L ++LQ IG QSP LL IH+NQ F+ ++NEPI A A ++G+ P Q+ QL+ S++P Q+AQMAA MG +Q+M SM GG G+GG GAGG+ I LSEEE AAV RL E+GF+RTD QAYLACDKNEALAANFL++ + GGG
Sbjct: 47 GKVLKDDSTLAEYNVKENDFLVVMVTKPKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPXXXXXXXXXXXXXXXXSSGEGSNVVSDEQMSATVQQLVDMGFPEDQVRSALRAAFNNPERAVEYLMTGIPEQ---AAAPAQTAVPSSGASAGSDDVANSLEALRNHPQFDALRQLVQSNPAALPAVLQQIGAQSPELLRLIHQNQDRFVQMLNEPIGTREAGSAPSSGSGAGAAPFDLGMGGNGAMPTPQQIQQLVDSLTPEQQAQMAAQMGMSPEQLRGLSQMLSNLPPGAMEQMMASMG-GGAGLEGIGGXXXX--GAGGHRIMLSEEEAAAVDRLCEMGFERTDVIQAYLACDKNEALAANFLMDSGDNFGGG 432
BLAST of mRNA_Ecto-sp13_S_contig13540.2811.1 vs. uniprot
Match: A0A7S4DGQ1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGQ1_HETAK) HSP 1 Score: 211 bits (538), Expect = 8.170e-59 Identity = 182/381 (47.77%), Postives = 219/381 (57.48%), Query Frame = 3
Query: 3 GQILKDECTLAEYKIKEEEFLVCMV-------TKPXXXXXXXXXXXXXXXXXXXT---------------SGAAPAAAPXXXXXXXXXXADHVRQLTEMGFPEDQVTAALRAAMGNPDIAVEFLMTGIPD----NIQAAAAPTQAGAAPTGAMETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPIDESAPPAAAAGNVXXXXXXXXXXXXXXXXX------NPAQVAQLLQ--SMSPAQRAQMAAAMGXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMG-------GMPPGAGGAGGNVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMG 1022
G+ILKD+ TLAE I EF+VCM P XXXXXX XXXXXXX T +G A A + V+QL +MGFPEDQV AALRAAMGN D+AVEFLM GIP+ N AA A + AA TG L+ R HPQ N LKRLVQ +P L +LQ IG QSP LLA IH NQ +F+ +MNEP+DESAP A XXXXXXXXXXXXXXXXX NPA +A+++Q S+ AQRAQ+A ++G EQ QQ+M AGMG G+PPGA IRL+++E AV RL ++GF+R + QAYLACDKNEA+AAN L++ MG
Sbjct: 48 GKILKDDQTLAEVNIGATEFIVCMSKPKKPARASPAXXXXXXAXXXXXXXAAPVTPXXXQXXXXXXXXRPAGEAAATNTSTPAQSNYENPETVQQLVDMGFPEDQVKAALRAAMGNGDVAVEFLMNGIPEGLPTNPAAAGASSGGAAASTGTGHPLDALRRHPQLNALKRLVQSNPGALQQVLQQIGAQSPELLATIHANQEEFVRMMNEPVDESAPAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPAIMARMMQLASLPEAQRAQVAQSLGIPADQLNQFVNLMRMMPPEQLQQIMA---------AGMGXXXXXXXGLPPGA-----TTIRLTQDEADAVNRLCDMGFNRNNVMQAYLACDKNEAMAANLLMDGMG 414
BLAST of mRNA_Ecto-sp13_S_contig13540.2811.1 vs. uniprot
Match: A0A1Z5KBW7_FISSO (UV excision repair protein RAD23 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBW7_FISSO) HSP 1 Score: 211 bits (536), Expect = 9.270e-59 Identity = 167/365 (45.75%), Postives = 204/365 (55.89%), Query Frame = 3
Query: 3 GQILKDECTLAEYKIKEEEFLVCMVTKPXXXXXXXXXXXXXXXXXXXTSGAAPAAAPXXXXXXXXXXA-------------------DHVRQLTEMGFPEDQVTAALRAAMGNPDIAVEFLMTGIPDNIQAAAAPTQAGAA-PTGAMETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPIDESAPPAAAAGN---VXXXXXXXXXXXXXXXXXNPAQVAQLLQSMSPAQRAQMAAAMGXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMGGMPPGAGGAGGNVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMGGG 1028
G++LKDE T+A IK +FLV MVTK XXXXXXXXXXXX XXXXXXXXXX + V LT MGFPE +V LRAA GNPD+AVEFL GIPD + AA T++ +A P A + L+ R HPQFNEL+RLVQ +P L +L IG+Q P LL I+ +Q F+ +MNEP+ +AP +A G+ NPAQ+AQ++QSMSPA+ QMA MG EQ QQ M M G G GG V+RL+EEE AAV RLTE+GFDR++AAQA+LACDKNEALAAN L++ MG G
Sbjct: 48 GKVLKDEDTIASCGIKPNDFLVVMVTKAKKPAATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTRTDTFSQEAVDNLTAMGFPEAEVRHCLRAAQGNPDVAVEFLTNGIPDAVSAAMNATESSSATPAQATQPLQALRNHPQFNELRRLVQSNPQMLQQVLAQIGQQQPELLEEINSHQALFLEMMNEPVT-AAPSSAPTGSRAPTASSESASGMGMPMEGMGNPAQMAQMIQSMSPAELDQMAQMMGLSSDQLRMTAQMLGQMPPEQLQQFMAHMGGG----EGHGGQ---------QVLRLTEEEMAAVDRLTEMGFDRSEAAQAFLACDKNEALAANLLMDSMGDG 398
BLAST of mRNA_Ecto-sp13_S_contig13540.2811.1 vs. uniprot
Match: B7FSN5_PHATC (RAD23 n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSN5_PHATC) HSP 1 Score: 210 bits (535), Expect = 1.500e-58 Identity = 168/369 (45.53%), Postives = 208/369 (56.37%), Query Frame = 3
Query: 3 GQILKDECTLAEYKIKEEEFLVCMVTKPXXXXXXXXXXXXXXXXXXXTSGAAPAAAPXXXXXXXXXX------------ADHVRQLTEMGFPEDQVTAALRAAMGNPDIAVEFLMTGIPDNIQAAAA---------PTQAGAAPTGAMETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPIDESAPPAAA------AGNVXXXXXXXXXXXXXXXXXNPAQVAQLLQSMSPAQRAQMAAAMGXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMGGMPPGAGGAGGNVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMGGG 1028
G++LKDE ++A IKE +FLV MVTK AAA XXXXXXXX A+ V LT MGFPE +V LRAA GNPDIAVEFL GIP+ + AAA P+ + + +G+ + L+ R HPQFN+L+RLVQ +P L +L IG+Q P LL I+ NQ F+ +MNEP++ SA +AA + NPAQ+AQ++Q MSP + QMAA M XXXXXXXXXXXXXXXX EQ Q M GG MGG V+RL+EEE AAV RL E+GFDR++AAQA+LACDKNEALAAN L++ MG G
Sbjct: 48 GKVLKDEDSIASAGIKENDFLVVMVTKAKKPVAAKPAATPTPVPAATPGPPVAAAASIEXXXXXXXXXXXXPTRADDVSAEAVANLTSMGFPEAEVKHCLRAAHGNPDIAVEFLTNGIPEGVAEAAAAMNTSAVTSPSASSESSSGSGQPLQALRNHPQFNDLRRLVQSNPQMLQQVLTQIGQQQPQLLQEINANQALFLQIMNEPVESSASVSAAPAVSGSSDAPSLGGLDSGAAAMMEGMGNPAQMAQMIQGMSPEELNQMAAMMXXXXXXXXXXXXXXXXXPPEQLSQFMMQAMGGGEGPESMGGS---------QVLRLTEEEMAAVDRLAEMGFDRSEAAQAFLACDKNEALAANLLMDSMGDG 407 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13540.2811.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13540.2811.1 >prot_Ecto-sp13_S_contig13540.2811.1 ID=prot_Ecto-sp13_S_contig13540.2811.1|Name=mRNA_Ecto-sp13_S_contig13540.2811.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=396bp MVTKPKPAAAAPAAPAPAPSPAPATSGAAPAAAPAAPAAPAAPNADHVRQback to top mRNA from alignment at Ecto-sp13_S_contig13540:2..4696- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13540.2811.1 ID=mRNA_Ecto-sp13_S_contig13540.2811.1|Name=mRNA_Ecto-sp13_S_contig13540.2811.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4695bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13540:2..4696- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13540:2..4696- >mRNA_Ecto-sp13_S_contig13540.2811.1 ID=mRNA_Ecto-sp13_S_contig13540.2811.1|Name=mRNA_Ecto-sp13_S_contig13540.2811.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1188bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13540:2..4696- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |