mRNA_Ecto-sp13_S_contig13532.2805.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13532.2805.1 vs. uniprot
Match: D7G9F5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9F5_ECTSI) HSP 1 Score: 147 bits (370), Expect = 1.800e-38 Identity = 85/106 (80.19%), Postives = 90/106 (84.91%), Query Frame = 1
Query: 406 MYYTGSSMMVVRESKNGNDNNSIKSNTDTGTXXXXXXDADSARRSLDVVDDVPISTLHSCDELRSKRTRVRGVAGALLLDFDIVCPQKRVLEVADNLLIMSNKPDL 723
MYYT SS+MVVRESK+ N NNS K XXXXXX DS RRSL VVDDVP+STLHSCDELRSKRTRV+GVAGALLLDFDIVCP+KRVLEV DNLLIMSNKPDL
Sbjct: 1 MYYTDSSVMVVRESKSKNGNNSAKXXXXXXXXXXXXXXXDSTRRSLRVVDDVPLSTLHSCDELRSKRTRVQGVAGALLLDFDIVCPEKRVLEVTDNLLIMSNKPDL 106
BLAST of mRNA_Ecto-sp13_S_contig13532.2805.1 vs. uniprot
Match: D7G9G6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G6_ECTSI) HSP 1 Score: 110 bits (274), Expect = 8.650e-22 Identity = 54/60 (90.00%), Postives = 54/60 (90.00%), Query Frame = 2
Query: 725 LKGVHFHVRKKAALTFMVPTLTMEKLEGVSGQLFTIEPHGSVETNADQWVPSPENGTEVS 904
LKGVHF VRKKAALTFMVPTLTMEKLEGVSG LFTIEP GSVE NADQWVP PENGTE S
Sbjct: 377 LKGVHFRVRKKAALTFMVPTLTMEKLEGVSGPLFTIEPQGSVEMNADQWVPPPENGTEAS 436
BLAST of mRNA_Ecto-sp13_S_contig13532.2805.1 vs. uniprot
Match: D8LLQ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ1_ECTSI) HSP 1 Score: 82.4 bits (202), Expect = 1.420e-13 Identity = 37/58 (63.79%), Postives = 49/58 (84.48%), Query Frame = 2
Query: 725 LKGVHFHVRKKAALTFMVPTLTMEKLEGVSGQLFTIEPHGSVETNADQWVPSPENGTE 898
LKGVHF V++KA+LTF+V T+ +EKLEG SG+LFT+EP G + +AD+W PSP+NGTE
Sbjct: 158 LKGVHFVVQEKASLTFIVATMVLEKLEGESGELFTVEPQGVLAMSADKWSPSPDNGTE 215
BLAST of mRNA_Ecto-sp13_S_contig13532.2805.1 vs. uniprot
Match: A0A6H5L8D9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D9_9PHAE) HSP 1 Score: 78.2 bits (191), Expect = 1.850e-11 Identity = 80/242 (33.06%), Postives = 111/242 (45.87%), Query Frame = 1
Query: 433 VVRESKNGNDNNSIKSNTDTG---------TXXXXXXDADSARRSLDVVDDV-PISTLHSCDELRSKRTRVRGVAGALLLDFDIVCPQKRVLEVADNLLIMSNKPDLP-KGRALPCAEEGRLDIHGAHVDDGKTRGG---IRPAVHHRASRFRGNECRPVGPIAREWD--------GGKYRLEEGHALYTASTITFFMQXXXXXXXXXXXXXXXXXXNDNIDNDNLGISRSTAVEPPHSIAD 1092
+R S D +S +N DTG T + +L VVDDV P+ TL SC+ELR +RT ++GV+G LLLD DIVC +KR+LEV +++++S+KPDL KG E+ L A + K G + ++ P I E D GG + L+ G A +TAST+T M+ NDN DN G +ST VE P + D
Sbjct: 534 AIRPSPTPGDEHSTVANADTGVNSNDTPKTTGTATATEMSRLTPALAVVDDVLPLYTLESCNELRFERTPIQGVSGVLLLDDDIVCTEKRILEVDHDVIVVSDKPDLRLKGVHFVVHEKVSLTFVVATMVLEKIEGESGELFTVEPQGVLAMSADKWSPSPEIGTEEDVHSLVALKGGTFELD-GKASFTASTMTISMRNKNEEKKLKN--------NDN--EDNRGTCQST-VEHPSTATD 763
BLAST of mRNA_Ecto-sp13_S_contig13532.2805.1 vs. uniprot
Match: D8LLQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ5_ECTSI) HSP 1 Score: 76.3 bits (186), Expect = 7.520e-11 Identity = 64/199 (32.16%), Postives = 96/199 (48.24%), Query Frame = 1
Query: 538 SLDVVDD-VPISTLHSCDELRSKRTRVRGVAGALLLDFDIVCPQKRVLEVADNLLIMSNKPDLP-KGRALPCAEEGRLDIHGAHVDDGKTRGG------IRPAVHHRASRFRGNEC------RPVGPIAREWDGGKYRLEEGHALYTASTITFFMQXXXXXXXXXXXXXXXXXXNDNIDNDNLGISRSTAVEPPHSIAD 1092
+L VVDD +P+ TL SC+ELR +RT ++GV+G LLLD DI+C +KR+L+V +++++S+KPDL KG E+ L A + K G + P S G+ V + GG++ L+ G A +TAST+T M+ N++ N G ST PP + D
Sbjct: 625 ALAVVDDGLPLYTLESCNELRFERTPIQGVSGVLLLDDDIICTEKRILDVGHDVIVVSDKPDLRLKGVHFVVNEKVSLTFMVATIVLEKIEGESGELFTVEPQGVLAMSADMGSPSPDNGTEEDVHSLVALKKGGRFELD-GRASFTASTMTISMRNKSEERKKNKDK--------NLNESNGGTCESTVEHPPTATVD 814
BLAST of mRNA_Ecto-sp13_S_contig13532.2805.1 vs. uniprot
Match: D8LLQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ0_ECTSI) HSP 1 Score: 75.1 bits (183), Expect = 1.740e-10 Identity = 35/58 (60.34%), Postives = 45/58 (77.59%), Query Frame = 2
Query: 725 LKGVHFHVRKKAALTFMVPTLTMEKLEGVSGQLFTIEPHGSVETNADQWVPSPENGTE 898
LKGVHF V +K +LTF+V T+ +EKLEG SG+LFT+EP G + +AD PSP+NGTE
Sbjct: 490 LKGVHFVVHEKVSLTFIVATMVLEKLEGESGELFTVEPQGVLAISADMGSPSPDNGTE 547
BLAST of mRNA_Ecto-sp13_S_contig13532.2805.1 vs. uniprot
Match: D8LLS3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLS3_ECTSI) HSP 1 Score: 73.2 bits (178), Expect = 6.850e-10 Identity = 39/70 (55.71%), Postives = 52/70 (74.29%), Query Frame = 1
Query: 517 DADSARRSLDVVDDV-PISTLHSCDELRSKRTRVRGVAGALLLDFDIVCPQKRVLEVADNLLIMSNKPDL 723
++D L VV DV P+ TL SC+ELR +RT V+GV+G LLLD DI C +KR+LEV +L+I+S+KPDL
Sbjct: 604 ESDRLTSGLAVVHDVLPLYTLESCNELRFERTPVQGVSGVLLLDDDIKCTEKRILEVGHDLIIVSDKPDL 673
BLAST of mRNA_Ecto-sp13_S_contig13532.2805.1 vs. uniprot
Match: D7G9F6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9F6_ECTSI) HSP 1 Score: 61.6 bits (148), Expect = 1.490e-6 Identity = 32/58 (55.17%), Postives = 41/58 (70.69%), Query Frame = 2
Query: 725 LKGVHFHVRKKAALTFMVPTLTMEKLEGVSGQLFTIEPHGSVETNADQWVPSPENGTE 898
L+GVHF V + AAL V TL +EKLEG SG++FTI+P G + +AD P PENGT+
Sbjct: 75 LEGVHFIVEENAALGIAVATLHVEKLEGDSGEIFTIDPGGFLGGHADHLRPLPENGTK 132
BLAST of mRNA_Ecto-sp13_S_contig13532.2805.1 vs. uniprot
Match: D8LN98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN98_ECTSI) HSP 1 Score: 58.5 bits (140), Expect = 2.090e-5 Identity = 28/54 (51.85%), Postives = 38/54 (70.37%), Query Frame = 1
Query: 562 PISTLHSCDELRSKRTRVRGVAGALLLDFDIVCPQKRVLEVADNLLIMSNKPDL 723
P +HSCDELRS TR+ GV LL+ D+VC ++R+LE+ D L+I+S KP L
Sbjct: 246 PSQKIHSCDELRSNGTRLEGV---LLITGDVVCQEERLLEITDELIILSEKPVL 296 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13532.2805.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13532.2805.1 >prot_Ecto-sp13_S_contig13532.2805.1 ID=prot_Ecto-sp13_S_contig13532.2805.1|Name=mRNA_Ecto-sp13_S_contig13532.2805.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=271bp MYYTGSSMMVVRESKNGNDNNSIKSNTDTGTTDTSNTDADSARRSLDVVDback to top mRNA from alignment at Ecto-sp13_S_contig13532:1019..3928- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13532.2805.1 ID=mRNA_Ecto-sp13_S_contig13532.2805.1|Name=mRNA_Ecto-sp13_S_contig13532.2805.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2910bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13532:1019..3928- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13532:1019..3928- >mRNA_Ecto-sp13_S_contig13532.2805.1 ID=mRNA_Ecto-sp13_S_contig13532.2805.1|Name=mRNA_Ecto-sp13_S_contig13532.2805.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=813bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13532:1019..3928- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |